Biology Centre of the Academy of Sciences of the Czech Republic, Institute of Hydrobiology

Staff List

Papers:
Grossart, H.P., Jezbera, J., Horňák, K., Hutalle, K.M.L., Buck, U., Šimek, K.
(2008) Top-down and bottom-up induced shifts in bacterial abundance, production and community composition in an experimentally divided humic lake. Environmental Microbiology, 10 (3): 635–652.
Research impacted
Horňák, K., Jezbera, J., Šimek, K.
(2008) Effects of a Microcystis aeruginosa bloom and bacterivory on bacterial abundance and activity in a eutrophic reservoir. Aquatic Microbial Ecology, 52 (2): 107–117.
Research impacted
Šimek, K., Horňák, K., Jezbera, J., Nedoma, J., Znachor, P., Hejzlar, J., Seďa, J.
(2008) Spatio-temporal patterns of bacterioplankton production and community composition related to phytoplankton composition and protistan bacterivory in a dam reservoir. Aquatic Microbial Ecology, 51 (3): 249–262.
Research impacted
Posch, T.*, Mindl, B.*, Horňák, K., Jezbera, J., Salcher, M.M.*, Sattler, B.*, Sonntag, B.*, Vrba, J., Šimek, K.
(2007) Biomass reallocations within freshwater bacterioplankton induced by manipulating phosphorus availability and grazing. Aquatic Microbial Ecology, 49 (3): 223–232.
Research impacted
Weinbauer, M.G.*, Horňák, K., Jezbera, J., Nedoma, J., Dolan, J.R.*, Šimek, K.
(2007) Synergistic and antagonistic effects of viral lysis and protistan grazing on bacterial biomass, production and diversity. Environmental Microbiology, 9 (3): 777–788.
Research impacted
Šimek, K, Weinbauer, M.G.*, Horňák, K., Jezbera, J., Nedoma, J., Dolan, J.R.*
(2007) Grazer and virus-induced mortality of bacterioplankton accelerates development of Flectobacillus populations in a freshwater community. Environmental Microbiology, 9 (3): 789–800.
Research impacted
Salcher, M.M.*, Hofer, J.*, Horňák, K., Jezbera, J., Sonntag, B.*, Vrba, J., Šimek, K., Posch, T.*
(2007) Modulation of microbial predator-prey dynamics by phosphorus availability: Growth patterns and survival strategies of bacterial phylogenetic clades. FEMS Microbiology Ecology, 60 (1): 40–50.
Research impacted
Horňák, K., Jezbera, J., Nedoma, J., Gasol, J.M.*, Šimek, K.
(2006) Effects of resource availability and bacterivory on leucine incorporation in different groups of freshwater bacterioplankton, assessed using microautoradiography. Aquatic Microbial Ecology, 45 (3): 277–289.
Research impacted
Horňák, K., Jezbera, J., Nedoma, J., Šimek, K.
(2006) Decreased activity of free-living reservoir bacterioplankton during summer cyanobacterial bloom. In: Book of Abstracts, 5th International Conference on Reservoir Limnology and Water Quality, Brno, August 27–31, 2006. Biology Centre of the Academy of Sciences of the Czech Republic, Institute of Hydrobiology, České Budějovice; Centre for Cyanobacteria and Their Toxins, Masaryk University Brno. ISBN 80–86188–23–X: pp. 44–47.
Others
Jezbera, J., Horňák, K., Šimek, K.
(2006) Prey selectivity of bacterivorous protists in different size fractions of reservoir water amended with nutrients. Environmental Microbiology, 8 (8): 1330–1339.
Research impacted
Jezbera, J., Šimek, K., Tundisi, J.G.*
(2006) Basic microbiological characteristics of the Broa reservoir (Sao Paulo State, Brazil) – abundance of microbes, bacterial growth and protistan grazing on bacterial production. In: Book of Abstracts, 5th International Conference on Reservoir Limnology and Water Quality, Brno, August 27–31, 2006: Biology Centre of the Academy of Sciences of the Czech Republic, Institute of Hydrobiology, České Budějovice; Centre for Cyanobacteria and Their Toxins, Masaryk University Brno. ISBN 80–86188–23–X: pp. 57–59.
Others
Šimek, K., Jezbera, J., Horňák, K., Nedoma, J., Hejzlar, J., Straškrábová, V.
(2006) Growth rates of major bacterioplankton groups in relation to phosphorus availability in a canyon-shaped reservoir. In: Book of Abstracts, 5th International Conference on Reservoir Limnology and Water Quality, Brno, August 27–31, 2006. Biology Centre of the Academy of Sciences of the Czech Republic, Institute of Hydrobiology, České Budějovice; Centre for Cyanobacteria and Their Toxins, Masaryk University Brno. ISBN 80–86188–23–X: pp. 40–43.
Others
Šimek, K., Horňák, K., Jezbera, J., Nedoma, J., Vrba, J., Straškrábová, V., Macek, M., Dolan, J.R.*, Hahn, M.W.*
(2006) Maximum growth rates and possible life strategies of different bacterioplankton groups in relation to phosphorus availability in a freshwater reservoir. Environmental Microbiology, 8 (9): 1613–1624.
Research impacted
Horňák, K., Mašín, M., Jezbera, J., Bettarel, Y.*, Nedoma, J., Sime-Ngando, T.*, Šimek, K.
(2005) Effects of decreased resource availability, protozoan grazing and viral impact on a structure of bacterioplankton assemblage in a canyon-shaped reservoir. FEMS Microbiology Ecology, 52 (3): 315–327.
Research impacted
Jezbera, J., Horňák, K., Šimek, K.
(2005) Food selection by bacterivorous protists: insight from the analysis of the food vacuole content by means of fluorescence in situ hybridization. FEMS Microbiology Ecology, 52 (3): 351–363.
Research impacted
Šimek, K., Horňák, K., Jezbera, J., Mašín, M., Nedoma, J., Gasol, J.M.*, Schauer, M.*
(2005) Influence of top-down and bottom-up manipulations on the R-BT065 subcluster of b-proteobacteria, an abundant group in bacterioplankton of a freshwater reservoir. Applied and Environmental Microbiology, 71 (5): 2381–2390.
Research impacted
Šimek, K., Jezbera, J., Horňák, K., Vrba, J., Seďa, J.
(2004) Role of diatom-attached choanoflagellates of the genus Salpingoeca as pelagic bacterivores. Aquatic Microbial Ecology, 36: 257–269.
Research impacted
Jezbera, J., Nedoma, J., Šimek, K.
(2003) Longitudinal changes in protistan bacterivory and bacterial production in two canyon-shaped reservoirs of different trophic status. Hydrobiologia, 504 (Special Issue): 115-130.
Research impacted
Mašín, M., Jezbera, J., Nedoma J., Straškrabová, V., Hejzlar J., Šimek, K.
(2003) Changes in bacterial community composition and microbial activities along the longitudinal axis of two canyon-shaped reservoirs with different inflow loading. Hydrobiologia, 504 (Special Issue): 99-113.
Research impacted
Horňák K., Mašín M., Jezbera J., Nedoma J., Šimek K.
(2003) Vliv živin a predace prvoků na složení společenstva bakterií přeneseného z živinami bohatého do živinami chudého prostředí přehradní nádrže [Effects of nutrients and protozoan grazing on community composition of bacteria that were transferred from a nutrient-rich to a nutrient-poor area of a reservoir]. Acta Facultatis Ecologiae: 10 (Suppl. 1): 23-25.
Others
Koutný, J.*, Rulík, M.*, Navrátil, M.*, Jezbera, J., Horňák, K.
(2003) Stanovení hlavních fylogenetických skupin bakterií v hyporheických sedimentech malého nížinného toku (Sitka, ČR) pomocí fluorescenční hybridizace in situ (FISH)[Determination of the main phylogenetic groups of bacteria in the hyporheic sediments of the small lowland creek (Sitka, Czech republic) using fluorescent in situ hybridization (FISH)]. Acta Facultatis Ecologiae: 10 (Suppl. 1): 35-37.
Others
Mašín, M., Horňák, K., Jezbera, J., Nedoma, J., Šimek, K.
(2003) Vliv živin a predace prvoky na změny morfologie bakterií při manipulačních pokusech v nádrži Římov [Effects of nutrients and protozoan grazing on changes of bacterial morphology during manipulation experiments in Římov reservoir]. Acta Facultatis Ecologiae: 10 (Suppl. 1): 27-30.
Others
Jezbera, J., Nedoma, J., Šimek, K.
(2002) The role of protisan bacterivory along longitudinal transects of two canyon-shaped reservoirs In: Hydrobiological Institute AS CR (eds.): ResLim 2002, Extended Abstracts, 4th International Conference on Reservoir Limnology and Water Quality, České Budějovice, August 12–16, 2002, Institute of Hydrobiology Academy of Sciences of the Czech Republic, Faculty of Biological Sciences University of South Bohemia, pp. 157-160.
Others
Macek, M., Jezbera, J., Seďa, J., Straškrabová, V., Šimek, K., Han, D.*
(2002) Distribution and growth rates of ciliates along a longitudinal profile of the Římov reservoir In: Hydrobiological Institute AS CR (eds.): ResLim 2002, Extended Abstracts, 4th International Conference on Reservoir Limnology and Water Quality, České Budějovice, August 12–16, 2002, Institute of Hydrobiology Academy of Sciences of the Czech Republic, Faculty of Biological Sciences University of South Bohemia, pp. 196-199.
Others
Posch, T.*, Jezbera, J., Vrba, J., Šimek, K., Pernthaler, J.*, Andreatta, S.*, Sonntag B.*
(2001) Size selective feeding in Cyclidium glaucoma (Ciliophora, Scuticociliatida) and its effects on bacterial community structure: a study from a continuous cultivation system. Microbial Ecology, 42: 217-227.
Research impacted
Jezbera, J., Nedoma, J., Šimek, K.
(2000) Role prvoků jako konzumentů bakteriální produkce na podélných profilech kaňonovitých údolních nádrží (The role of protists as consumers of bacterial production on longitudinal transects of canyon shaped reservoirs). In: Rulík, M. (ed.), XII. Limnologická konference Limnologie na přelomu tisíciletí, Kouty nad Desnou, September 18-22, 2000, Univerzita Palackého Olomouc, pp. 13-17.
Others


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© 2009 Biology Centre of the Academy of Sciences of the Czech Republic, v. v. i.
Institute of Hydrobiology