Biology Centre of the Academy of Sciences of the Czech Republic, Institute of Hydrobiology

Staff List

Nedoma, Jiří

nedoma@hbu.cas.cz

+420 387 775875
https://sites.google.com/site/jirned

Papers:

Duhamel, S., Gregori, G., Van Wambeke, F., Mauriac, R., Nedoma, J.
(2008) A method for analysing phosphatase activity in aquatic bacteria at the single cell level using flow cytometry. Journal of Microbiological Methods, 75 (2): 269–278.
Research impacted

Mašín, M., Nedoma, J., Pechar, L., Koblížek, M.
(2008) Distribution of aerobic anoxygenic phototrophs in temperate freshwater systems. Environmental Microbiology, 10 (8): 1988–1996.
Research impacted

Šimek, K., Horňák, K., Jezbera, J., Nedoma, J., Znachor, P., Hejzlar, J., Seďa, J.
(2008) Spatio-temporal patterns of bacterioplankton production and community composition related to phytoplankton composition and protistan bacterivory in a dam reservoir. Aquatic Microbial Ecology, 51 (3): 249–262.
Research impacted

Štrojsová, A., Nedoma, J., Štrojsová, M., Cao, X., Vrba, J.
(2008) The role of cell-surface-bound phosphatases in species competition within natural phytoplankton assemblage: an in situ experiment. Journal of Limnology, 67 (2): 128–138.
Research impacted

Štrojsová, M., Nedoma, J., Seďa, J., Vrba, J.
(2008) Diet quality impact on growth, reproduction and digestive activity in Brachionus calyciflorus. Journal of Plankton Research, 30 (10): 1123–1131.
Research impacted

Van Wambeke, F., Nedoma, J, Duhamel, S., Lebaron, P.
(2008) Alkaline phosphatase activity of marine bacteria studied with ELF 97 substrate: success and limits in the P-limited Mediterranean Sea. Aquatic Microbial Ecology, 52 (3): 245–251.
Research impacted

Znachor, P., Nedoma, J.
(2008) Application of the PDMPO technique in studying silica deposition in natural populations of Fragilaria crotonensis (Bacillariophyceae) at different depths in a eutrophic reservoir. Journal of Phycology, 44 (2): 518–525.
Research impacted

Znachor, P., Zapomělová, E., Řeháková, K., Nedoma, J., Šimek, K.
(2008) The effect of extreme rainfall on summer succession and vertical distribution of phytoplankton in a lacustrine part of a eutrophic reservoir. Aquatic Sciences, 70 (1): 77–86.
Research impacted

Weinbauer, M.G.*, Horňák, K., Jezbera, J., Nedoma, J., Dolan, J.R.*, Šimek, K.
(2007) Synergistic and antagonistic effects of viral lysis and protistan grazing on bacterial biomass, production and diversity. Environmental Microbiology, 9 (3): 777–788.
Research impacted

Šimek, K, Weinbauer, M.G.*, Horňák, K., Jezbera, J., Nedoma, J., Dolan, J.R.*
(2007) Grazer and virus-induced mortality of bacterioplankton accelerates development of Flectobacillus populations in a freshwater community. Environmental Microbiology, 9 (3): 789–800.
Research impacted

Nedoma, J., Van Wambeke, F.*, Štrojsová, A., Štrojsová, M., Duhamel, S.*
(2007) Affinity of extracellular phosphatases for ELF97 phosphate in aquatic environments. Marine and Freshwater Research, 58 (5): 454–460.
Research impacted

Nedoma, J., García, J.-C.*, Comerma, M.*, Šimek, K., and Armengol J.*
(2006) Extracellular phosphatases in a Mediterranean reservoir: seasonal, spatial and kinetic heterogeneity Freshwater Biology 51: 1264–1276
Research impacted

Horňák, K., Jezbera, J., Nedoma, J., Gasol, J.M.*, Šimek, K.
(2006) Effects of resource availability and bacterivory on leucine incorporation in different groups of freshwater bacterioplankton, assessed using microautoradiography. Aquatic Microbial Ecology, 45 (3): 277–289.
Research impacted

Horňák, K., Jezbera, J., Nedoma, J., Šimek, K.
(2006) Decreased activity of free-living reservoir bacterioplankton during summer cyanobacterial bloom. In: Book of Abstracts, 5th International Conference on Reservoir Limnology and Water Quality, Brno, August 27–31, 2006. Biology Centre of the Academy of Sciences of the Czech Republic, Institute of Hydrobiology, České Budějovice; Centre for Cyanobacteria and Their Toxins, Masaryk University Brno. ISBN 80–86188–23–X: pp. 44–47.
Others

Šimek, K., Jezbera, J., Horňák, K., Nedoma, J., Hejzlar, J., Straškrábová, V.
(2006) Growth rates of major bacterioplankton groups in relation to phosphorus availability in a canyon-shaped reservoir. In: Book of Abstracts, 5th International Conference on Reservoir Limnology and Water Quality, Brno, August 27–31, 2006. Biology Centre of the Academy of Sciences of the Czech Republic, Institute of Hydrobiology, České Budějovice; Centre for Cyanobacteria and Their Toxins, Masaryk University Brno. ISBN 80–86188–23–X: pp. 40–43.
Others

Straškrábová, V., Cogalniceanu, D.*, Nedoma, J., Parpala, L.*, Postolache, C.*, Tudorancea, C.*, Vadineanu, A.*, Valcu, C.-M.*, Zinevici, V.*
(2006) Bacteria and pelagic food webs in Pristine alpine lakes (Retezat Mountains, Romania). In: Banaduc, D., Sirbu I., Curtean-Banaduc, A. (eds.), Transylvanian Review of Systematical and Ecological Research, Vol. 3, " The Retezat National Park": pp. 1–10.
Research non impacted

Nedoma, J., Nedbalová, L.
(2006) Chlorophyll content of Plešné Lake phytoplankton cells studied with image analysis. Biologia, 61 (Suppl. 20): S491–S498.
Research impacted

Nedoma, J., Vrba, J.
(2006) Specific activity of cell-surface acid phosphatase in different bacterioplankton morphotypes in an acidified mountain lake. Environmental Microbiology, 8 (7): 1271–1279.
Research impacted

Šimek, K., Horňák, K., Jezbera, J., Nedoma, J., Vrba, J., Straškrábová, V., Macek, M., Dolan, J.R.*, Hahn, M.W.*
(2006) Maximum growth rates and possible life strategies of different bacterioplankton groups in relation to phosphorus availability in a freshwater reservoir. Environmental Microbiology, 8 (9): 1613–1624.
Research impacted

Vrba, J., Kopáček, J., Bittl, T., Nedoma, J., Štrojsová, A., Nedbalová, L., Kohout, L.*, Fott, J.*
(2006) A key role of aluminium in phosphorus availability, food web structure, and plankton dynamics in strongly acidified lakes. Biologia, 61 (Suppl. 20): S441–S451.
Research impacted

Komárková, J., Nedoma, J.
(2006) The CYATAXO Database. Czech Phycology, 6: 49–54.
Research non impacted

Horňák, K., Mašín, M., Jezbera, J., Bettarel, Y.*, Nedoma, J., Sime-Ngando, T.*, Šimek, K.
(2005) Effects of decreased resource availability, protozoan grazing and viral impact on a structure of bacterioplankton assemblage in a canyon-shaped reservoir. FEMS Microbiology Ecology, 52 (3): 315–327.
Research impacted

Šimek, K., Horňák, K., Jezbera, J., Mašín, M., Nedoma, J., Gasol, J.M.*, Schauer, M.*
(2005) Influence of top-down and bottom-up manipulations on the R-BT065 subcluster of b-proteobacteria, an abundant group in bacterioplankton of a freshwater reservoir. Applied and Environmental Microbiology, 71 (5): 2381–2390.
Research impacted

Straškrábová, V., Izmest’yeva, L. R.*, Maksimova, E. A.*, Fietz, S.*, Nedoma, J., Borovec, J., Kobanova, G. I.*, Shchetinina, E. V.*, Pislegina, E. V.*
(2005) Primary production and microbial activity in the euphotic zone of Lake Baikal (Southern Basin) during late winter. Global and Planetary Change, 46 (1–4): 57–73.
Research impacted

Štrojsová, A., Vrba, J., Nedoma, J., Šimek, K.
(2005) Extracellular phosphatase activity of freshwater phytoplankton exposed to different in situ phosphorus concentrations. Marine and Freshwater Reseach, 56 (4): 417–424.
Research impacted

Znachor, P., Vrba, J., Nedoma, J., Kopáček, J.
(2005) Bacterial and phytoplankton responses to nutrient and pH changes during short term in situ experiments in two acidified lakes. Algological Studies, 115: 79–99.
Research non impacted

Kopáček, J., Brzáková, M., Hejzlar, J., Nedoma, J., Porcal, P., Vrba, J.
(2004) Nutrient cycling in a strongly acidified mesotrophic lake. Limnology and Oceanography, 49 (4): 1202–1213.
Research impacted

Vrba, J., Callieri, C.*, Bittl, T.*, Šimek, K., Bertoni, R.*, Filandr, P.*, Hartman, P., Hejzlar, J., Macek, M., Nedoma, J.
(2004) Are bacteria the major producers of extracellular glycolytic enzymes in aquatic environments? International Review of Hydrobiology, 89 (1): 102-117.
Research impacted

Znachor, P., Nedoma, J.
(2004) Cell specific primary production of autotrophic and mixotrophic phytoplankton in acidified lakes of the Bohemian Forest. Algological Studies, 112: 141-155.
Research non impacted

Brzáková, M., Hejzlar, J., Nedoma J.
(2003) Phosphorus uptake by suspended and settling seston in a stratified reservoir. Hydrobiologia, 504 (Special Issue): 39-49.
Research impacted

Jezbera, J., Nedoma, J., Šimek, K.
(2003) Longitudinal changes in protistan bacterivory and bacterial production in two canyon-shaped reservoirs of different trophic status. Hydrobiologia, 504 (Special Issue): 115-130.
Research impacted

Mašín, M., Jezbera, J., Nedoma J., Straškrabová, V., Hejzlar J., Šimek, K.
(2003) Changes in bacterial community composition and microbial activities along the longitudinal axis of two canyon-shaped reservoirs with different inflow loading. Hydrobiologia, 504 (Special Issue): 99-113.
Research impacted

Nedoma, J., Straškrábová, V., Znachor, P., Vrba, J.
(2003) Primary and bacterial production in three acidified lakes in the Bohemian Forest. Silva Gabreta, 9: 53-70.
Research non impacted

Nedoma, J., Štrojsová, A., Vrba, J., Komárková, J., Šimek K.
(2003) Extracellular phosphatase activity of natural plankton studied with ELF97 phosphate: fluorescence quantification and labelling kinetics. Environmental Microbiology, 5 (6): 462-472.
Research impacted

Nedoma, J., Padisák, J.*, Koschel, R.*
(2003) Utilisation of 32P-labelled nucleotide- and non-nucleotide dissolved organic phosphorus by freshwater plankton. Archiv für Hydrobiologie Advances in Limnology, 58: 87-99.
Research non impacted

Šimek, K., Horňák, K., Mašín, M., Christaki, U.*, Nedoma, J., Weinbauer, M.G.*, Dolan, J.R.*
(2003) Comparing the effects of resource enrichment and grazing on a bacterioplankton community of a meso-eutrophic reservoir. Aquatic Microbial Ecology, 31(2): 123-135.
Research impacted

Štrojsová, A.,Vrba, J., Nedoma, J., Komárková, J., Znachor, P.
(2003) Seasonal study of extracellular phosphatase expression in the phytoplankton of a eutrophic reservoir. European Journal of Phycology, 38: 295-306.
Research impacted

Vrba, J., Nedoma, J., Kohout, L.*, Kopáček, J., Nedbalová, L.*, Ráčková, P.*, Šimek, K.
(2003) Massive occurrence of heterotrophic flaments in acidified lakes: seasonal dynamics and composition. FEMS Microbiology Ecology, 46 (3): 281-294.
Research impacted

Weinbauer, M.G.*, Christaki, U.*, Nedoma, J., Šimek, K.
(2003) Comparing the effects of resource enrichment and grazing on viral production in a meso-eutrophic reservoir. Aquatic Microbial Ecology, 31 (2):137-144.
Research impacted

Brzáková, M., Hejzlar, J., Nedoma, J.
(2003) Příjem fosforu sedimentujícím sestonem. [Phosphorus uptake by settling seston]. In: Hucko, P. (ed.) Zborník prednášok z konferencie so zahraničnou účasťou Sedimenty vodných tokov a nádrží, Bratislava, April 15-16, 2003, Pobočka SVHS ZSVTS, Bratislava, pp.62-70. ISBN 80-89062-20-2.
Others

Horňák K., Mašín M., Jezbera J., Nedoma J., Šimek K.
(2003) Vliv živin a predace prvoků na složení společenstva bakterií přeneseného z živinami bohatého do živinami chudého prostředí přehradní nádrže [Effects of nutrients and protozoan grazing on community composition of bacteria that were transferred from a nutrient-rich to a nutrient-poor area of a reservoir]. Acta Facultatis Ecologiae: 10 (Suppl. 1): 23-25.
Others

Mašín, M., Horňák, K., Jezbera, J., Nedoma, J., Šimek, K.
(2003) Vliv živin a predace prvoky na změny morfologie bakterií při manipulačních pokusech v nádrži Římov [Effects of nutrients and protozoan grazing on changes of bacterial morphology during manipulation experiments in Římov reservoir]. Acta Facultatis Ecologiae: 10 (Suppl. 1): 27-30.
Others

Nedoma, J., Vrba, J., Štrojsová, A., Šimek, K., Znachor, P.
(2003) Možnosti využití analýzy obrazu při vyhodnocování mikrobiální biomasy a aktivity ve vzorcích přirozených vod [Use of image analysis for estimation of microbial biomass and activity in samples of natural aquatic ecosystems]. Acta Facultatis Ecologiae: 10 (Suppl. 1): 59-61.
Others

Šimek, K., Horňák, K., Mašín, M., Nedoma, J., Weinbauer, M.*
(2003) Faktory ovlivňující složení společenstev bakterioplanktonu [Factors shaping community composition of bacterioplankton]: Acta Facultatis Ecologiae: 10 (Suppl. 1): 19-21.
Others

Straškrábová, V., Nedoma, J., Šimek, K., Vrba, J.
(2003) Pelagic microbial assemblages in oligotrophic mountain lakes. Acta Facultatis Ecologiae: 10 (Suppl. 1): 15-18.
Others

Štrojsová, A., Vrba, J., Nedoma, J.
(2003) Extracelulární fosfatázy fytoplanktonu nádrže Římov [Extracellular phosphatases of the Římov reservoir phytoplankton]. Acta Facultatis Ecologiae: 10 (Supplement 1): 65-68.
Others

Šimek, K., Nedoma, J., Pernthaler, J.*, Posch, T.*, Dolan, J. R.*
(2002) Altering the balance between bacterial production and protistan bacterivory triggers shifts in freshwater bacterial community composition. Antonie van Leeuwenhoek, 81: 453-463.
Research impacted

Horňák, K.*, Mašín, M.*, Nedoma, J., Šimek, K.
(2002) Využití genetických sond při studiu bakterioplanktonu vodárenské nádrže Římov (Use of genetic probes to study bacterioplankton of Římov reservoir). In: Ambrožová, J. (ed.): 18. seminář Aktuální otázky vodárenské biologie, Praha, February 6–7, 2002, VŠCHT, Praha, pp. 125–1290. ISBN 80–7080–467–X.
Others

Brzáková, M., Hejzlar, J., Nedoma, J.
(2002) Seston sedimentation and phosphorus uptake in a stratified reservoir In: Hydrobiological Institute AS CR (eds.): ResLim 2002, Extended Abstracts, 4th International Conference on Reservoir Limnology and Water Quality, České Budějovice, August 12–16, 2002, Institute of Hydrobiology Academy of Sciences of the Czech Republic, Faculty of Biological Sciences University of South Bohemia, pp. 54-57.
Others

Jezbera, J., Nedoma, J., Šimek, K.
(2002) The role of protisan bacterivory along longitudinal transects of two canyon-shaped reservoirs In: Hydrobiological Institute AS CR (eds.): ResLim 2002, Extended Abstracts, 4th International Conference on Reservoir Limnology and Water Quality, České Budějovice, August 12–16, 2002, Institute of Hydrobiology Academy of Sciences of the Czech Republic, Faculty of Biological Sciences University of South Bohemia, pp. 157-160.
Others

Mašín, M., Šimek, K., Nedoma, J., Straškrábová, V.
(2002) Dynamics of bacterial communities composition along longitudinal axes of two canyon-shaped reservoirs In: Hydrobiological Institute AS CR (eds.): ResLim 2002, Extended Abstracts, 4th International Conference on Reservoir Limnology and Water Quality, České Budějovice, August 12–16, 2002, Institute of Hydrobiology Academy of Sciences of the Czech Republic, Faculty of Biological Sciences University of South Bohemia, pp. 208-211.
Others

Nedoma, J., Vrba, J., Hejzlar, J., Šimek, K., García, J.C.*, Armengol, J.*
(2002) Spatial patterns of phosphorus dynamics along to canyon-shaped reservoirs of different trophy In: Hydrobiological Institute AS CR (eds.): ResLim 2002, Extended Abstracts, 4th International Conference on Reservoir Limnology and Water Quality, České Budějovice, August 12–16, 2002, Institute of Hydrobiology Academy of Sciences of the Czech Republic, Faculty of Biological Sciences University of South Bohemia, pp. 250-253.
Others

Šimek, K., Mašín, M., Horňák, K., Nedoma, J., Hejzlar, J.
(2002) Factors controlling dynamics and community composition of microbial assemblages in a canyon-shaped reservoir In: Hydrobiological Institute AS CR (eds.): ResLim 2002, Extended Abstracts, 4th International Conference on Reservoir Limnology and Water Quality, České Budějovice, August 12–16, 2002, Institute of Hydrobiology Academy of Sciences of the Czech Republic, Faculty of Biological Sciences University of South Bohemia, pp. 314-317.
Others

Straškrabová, V., Šimek, K., Vrba, J., Nedoma, J., Macek, M., Hartman, P.
(2002) Seasonal and interannual changes of microbial loop in pelagic food webs of reservoirs In: Hydrobiological Institute AS CR (eds.): ResLim 2002, Extended Abstracts, 4th International Conference on Reservoir Limnology and Water Quality, České Budějovice, August 12–16, 2002, Institute of Hydrobiology Academy of Sciences of the Czech Republic, Faculty of Biological Sciences University of South Bohemia, pp. 322-325.
Others

Štrojsová, A., Komárková, J., Nedoma, J., Vrba, J.
(2002) Seasonal study of expression of extracellular phosphatases in natural phytoplankton in an eutrophic reservoir In: Hydrobiological Institute AS CR (eds.): ResLim 2002, Extended Abstracts, 4th International Conference on Reservoir Limnology and Water Quality, České Budějovice, August 12–16, 2002, Institute of Hydrobiology Academy of Sciences of the Czech Republic, Faculty of Biological Sciences University of South Bohemia, pp. 326-329.
Others

Vrba, J., Nedoma, J., Šimek, K., Straškrabová, V., Štrojsová, A., Fuksa, J.K.*, Svoboda, J.*
(2002) Extracellular enzymes and production parameters in two canyon reservoirs of different trophy: spatial patterns In: Hydrobiological Institute AS CR (eds.): ResLim 2002, Extended Abstracts, 4th International Conference on Reservoir Limnology and Water Quality, České Budějovice, August 12–16, 2002, Institute of Hydrobiology Academy of Sciences of the Czech Republic, Faculty of Biological Sciences University of South Bohemia, pp. 362-365.
Others

Bittl, T.*, Vrba, J., Nedoma, J., Kopáček, J.
(2001) Impact of ionic aluminium on extracellular phosphatases in acidified lakes. Environmental Microbiology, 3 (9): 578-587.
Research impacted

Nedoma, J., Vrba, J., Hanzl, T.*, Nedbalová, L.*
(2001) Quantification of pelagic filamentous microorganisms in aquatic environments using the line-intercept method. FEMS Microbiology Ecology 38: 81-85.
Research impacted

Šimek, K., Armengol, J.*, Comerma, M.*, Garcia, J.C.*, Kojecká, P.*, Nedoma, J., Hejzlar, J.
(2001) Changes in the epilimnetic bacterial community composition, production, and protist-induced mortality along the longitudinal axis of a highly eutrophic reservoir. Microbial Ecology, 42: 359-371.
Research impacted

Šimek, K., Pernthaler, J.*, Weinbauer, M.G.*, Horňák, K.*, Dolan, J.R.*, Nedoma, J., Mašín, M.*, Amann, R.*
(2001) Changes in bacterial community composition and dynamics and viral mortality rates associated with enhanced flagellate grazing in a mesoeutrophic reservoir. Applied and Environmental Microbiology, 6: 2723-2733.
Research impacted

Brzáková, M., Hejzlar, J., Borovec, J., Nedoma, J., Seďa, J., Šimek, K., Vrba, J.
(2001) Retence fosforu ve vodárenské nádrži Římov (Phosphorus retention in drinking water reservoir Římov). In: Kalousková, N., Dolejš, P. (eds.) Sborník z konference Pitná voda 2001, 6. pokračování konferencí Pitná voda z údolních nádrží, Tábor, May 21-24, 2001, W&ET Team, Č. Budějovice, pp. 295-300.
Others

Šimek, K., Jürgens, K.*, Nedoma, J., Comerma, M.*, Armengol, J.*
(2000) Ecological role and bacterial grazing of Halteria spp.: small freshwater oligotrichs as dominant pelagic ciliate bacterivores. Aquatic Microbial Ecology, 22: 43-56.
Research impacted

Straškrabová, V., Fott, J.*, Hartman, P., Macek, M., Nedoma, J., Šimek, K., Vrba, J.
(2000) Structure of pelagic food webs in low-alkalinity lakes – forested and alpine catchments. Silva Gabreta, 4:199-212.
Research non impacted

Jezbera, J., Nedoma, J., Šimek, K.
(2000) Role prvoků jako konzumentů bakteriální produkce na podélných profilech kaňonovitých údolních nádrží (The role of protists as consumers of bacterial production on longitudinal transects of canyon shaped reservoirs). In: Rulík, M. (ed.), XII. Limnologická konference Limnologie na přelomu tisíciletí, Kouty nad Desnou, September 18-22, 2000, Univerzita Palackého Olomouc, pp. 13-17.
Others

Nedoma, J., Vrba, J.
(2000) Vláknité mikroorganismy v šumavských jezerech (Filamentous microorganisms of Bohemian Forest lakes). In: Rulík, M. (ed.), XII. Limnologická konference Limnologie na přelomu tisíciletí, Kouty nad Desnou, September 18-22, 2000, Univerzita Palackého Olomouc, pp. 30-33.
Others

Šimek, K., Horňák, K., Mašín, M., Nedoma, J.
(2000) Vliv protozoální predace na dynamiku a složení bakteriálních společenstev v nádrži Římov (Impacts of protistan bacterivory on the dynamics and community composition of bacterioplankton in the Římov reservoir). In: Rulík, M. (ed.), XII. Limnologická konference Limnologie na přelomu tisíciletí, Kouty nad Desnou, September 18-22, 2000, Univerzita Palackého Olomouc, pp. 43-46.
Others

Vrba, J., Bittl, T.*, Nedoma, J., Kopáček, J., Nedbalová, L.*, Fott, J.*
(2000) Jedinečný plankton acidifikovaných šumavských jezer jako důsledek působení hliníku a limitace fosforem (Unique plankton of acidified Bohemian Forest lakes as a consequence of aluminium effect and phosphorus limitation). In: Rulík, M. (ed.), XII. Limnologická konference Limnologie na přelomu tisíciletí, Kouty nad Desnou, September 18-22, 2000, Univerzita Palackého Olomouc, pp. 47-51.
Others

Kopáček, J., Hejzlar, J., Porcal, P., Nedoma, J.
(1999) Chemistry of Prášilské Lake and its tributaries during the 1998 summer temperature stratification. Silva Gabreta, 3: 33-48.
Research non impacted

Posch, T.*, Šimek, K., Vrba, J., Pernthaler, J.*, Nedoma, J., Sattler, B.*, Sonntag, B.*, Psenner, R.*
(1999) Predator-induced changes of bacterial size-structure and productivity studied on an experimental microbial community. Aquatic Microbial Ecology, 18: 235-246.
Research impacted

Šimek, K., Kojecká, P., Nedoma, J., Hartman, P., Vrba, J., Dolan, J. R.*
(1999) Shifts in bacterial community composition associated with different microzooplankton size fractions in a eutrophic reservoir. Limnology and Oceanography, 44 (7): 1634-1644.
Research impacted

Straškrabová, V., Callieri, C.*, Carrillo, P.*, Cruz-Pizarro, L.*, Fott, J.*, Hartman, P., Macek, M., Medina-Sánchez, J. M.*, Nedoma, J., Šimek, K.
(1999) Investigations on pelagic food webs in mountain lakes – aims and methods. Journal of Limnology, 58 (2): 77-87.
Research impacted

Straškrabová, V., Šimek, K., Nedoma, J.
(1999) Importance of pelagic bacteria in lakes and reservoirs of different trophy- implications for long-term monitoring. In: Lake 99, Sustainable Lake Management, 8th International Conference on the Conservation and Management of Lakes, Vol. II, S7C-5, 4 pp. Copenhagen, May 17-21, 1999. /Extended abstract/
Others

Šimek, K., Armengol, J.*, Comerma, M.*, Garcia, J. C.*, Chrzanowski, T.H.*, Kojecká, P., Macek, M., Nedoma, J., Straškrabová, V.
(1999) Impacts of protistan grazing on bacterial dynamics and composition in reservoirs of different trophy: In: Tundisi, J. G., Straškraba, M. (eds.), Theoretical Reservoir Ecology and its Applications, pp. 267-282, International Institute of Ecology Brazilian Academy of Sciences and Backhuys Publishers.
Research non impacted

Nedoma, J., Vrba, J., Hanzl,T.
(1999) Kvantifikace vláknitých mikroorganismů a jejich výskyt v acidifikovaných jezerech Šumavy (Quantification of filamentous microorganisms and their occurrence in acidified Bohemian Forest lakes). In: Sládeková, D. (ed.), Zborník referátov prednesených na seminári: Nové poznatky v mikrobioológii vody VII, pp. 27-34. Poprad, September 29-October 1, 1999, Československá spoločnost´ mikrobiologická.
Others

Šimek, K., Comerma, M.*, Garcia, J.-C.*, Hejzlar, J., Kojecká, P., Nedoma, J.
(1999) Eliminace bakteriálního znečištění na podélném profilu vodárenské nádrže (An elimination of bacterial pollution along a longitudinal transect of a drinking water reservoir). In: Sládeček, V. (ed.) Sborník ze 14. semináře Aktuální otázky vodárenské biologie, pp. 96-100. Praha, February 4-5, 1998, Pobočka, ČVVS.
Others

Šimek, K. - Armengol, J. - Comerma, M. - Garcia, J. C. - Chrzanowski, T. H. - Macek, M. - Nedoma, J. - Straškrabová, V.
(1998) Characteristics of protistan control of bacterial production in three reservoirs of different trophy. 10 s. International Review of Hydrobiology, 83 [Special Issue] 485-494 (1998).
Research impacted

Šimek, K. - Babenzien, D. - Bittl, T. - Koschel, R. - Macek, M. - Nedoma, J. - Vrba, J.
(1998) Microbial Food Webs in an Artificially Divided Acidic Bog Lake. 16 s. International Revue der gesamten Hydrobiologie, 83 [1] 3-18 (1998).
Research impacted

Straškrabová, V. - Hartman, P. - Macek, M. - Nedoma, J. - Šimek, K. - Vrba, J.
(1997) S helikoptérou za mikroby horských jezer. In: Limnologický výzkum pro rozumné hospodaření s vodou. - (Ed. Lukavský, J.; Švehlová, D.). - Třeboň, ČLS, SLS 1997. - S. 188.
Others

Šimek, K. - Hartman, P. - Kojecká, P. - Nedoma, J. - Pernthaler, J. - Posch, T. - Vrba, J.
(1997) Faktory ovlivňující diverzitu společenstev vodních bakterií: využití fluorescenčně značených RNA-sond. In: Limnologický výzkum pro rozumné hospodaření s vodou. - (Ed. Lukavský, J.; Švehlová, D.). - Třeboň, ČLS, SLS 1997. - S. 196-199.
Others

Šimek, K. - Hartman, P. - Nedoma, J. - Pernthaler, J. - Springmann, D. - Vrba, J. - Psenner, R.
(1997) Community structure, picoplankton grazing and zooplankton control of heterotrophic nanoflagellates in a eutrophic reservoir during the summer phytoplankton maximum. Aquatic Microbial Ecology, 12, 49-63 (1997).
Research impacted

Šimek, K. - Vrba, J. - Pernthaler, J. - Posch, T. - Hartman, P. - Nedoma, J. - Psenner, R.
(1997) Morphological and compositional shifts in an experimental bacterial community influenced by protists with contrasting feeding modes. Applied and Environmental Microbiology, 63 [2] 587-595 (1997).
Research impacted

Vrba, J. - Kopáček, J. - Fott, J. - Hartman, P. - Hejzlar, J. - Komárková, J. - Macek, M. - Nedoma, J. - Straškrabová, V. - Šimek, K.
(1997) Limnologický výzkum šumavských jezer na sklonku 20. století. In: Limnologický výzkum pro rozumné hospodaření s vodou. - (Ed. Lukavský, J.; Švehlová, D.). - Třeboň, ČLS, SLS 1997. - S. 222-225.
Others

Vrba, J. - Nedoma, J. - Filandr, P.
(1996) Resolving complex saturation kinetics: a potential tool in interpretationof extracellular β-N-acetylhexosaminidase data from natural freshwaters. In: Chitin Enzymology. - (Ed. Muzzareli, R. A. A.). - Atec Edizioni 1996. - S. 303-311.
Research non impacted

Vrba, J. - Nedoma, J. - Šimek, K. - Filandr, P.
(1996) Different sources of extracellular β-N-acetylhexosaminidase-like activities in freshwaters. In: Chitin Enzymology. - (Ed. Muzzareli, R. A. A.). - -, Atec Edizioni 1996. - S. 293-301.
Research non impacted

Šimek, K. - Bobková, J. - Macek, M. - Nedoma, J.
(1995) Ciliate grazing on picoplankton in a eutrophic reservoir during the summer phytoplankton maximum: A study at the species and community level. Limnology and Oceanography, 40 [6] 1077-1090 (1995).
Research impacted

Vrba, J. - Vyhnálek, V. - Hejzlar, J. - Nedoma, J.
(1995) Comparison of phosphorus deficiency indices during a spring phytoplankton bloom in a eutrophic reservoir. Freshwater Biology, 33, [-] 73-81 (1995).
Research impacted

Hejzlar, J. - Nedoma, J. - Kopáček, J.
(1994) Formy fosforu v procesu eutrofizace údolních nádrží. In: Aktuální otázky vodárenské biologie. - Praha, Pobočka ČVVS Ministerstva životního prostředí ČR 1994. - S. 29-35.
Others

Nedoma, J. - Vrba, J. - Hejzlar, J. - Šimek, K. - Straškrabová, V.
(1994) N-acetylglucosamine dynamics in freshwater environments: Concentration of amino sugars, extracellular enzyme activities, and microbial uptake. Limnology and Oceanography, 39 [5] 1088-1100 (1994).
Research impacted

Straškrabová, V. - Vrba, J. - Šimek, K. - Nedoma, J.
(1994) Mikrobiologie kyselých horských jezer (Šumava). In: Nové metódy v mikrobiológii vody. - 6. - (Ed. Tržilová, B.). - Bratislava, Československá spoločnosť mikrobiologická, Komisia mikrobiológie vody 1994. - S. 97-104.
Others

Vrba, J. - Nedoma, J. - Šimek, K. - Hartman, P. - Macháček, J.
(1994) Aktivita extracelulárních hydroláz ve vodách: různá ekologická interpretace a význam. In: Zborník 10. Limnologickej konferencie. - Bratislava, Slovenská Limnologická spoločnosť 1994. - S. 240-244.
Others

Vyhnálek, V. - Hejzlar, J. - Nedoma, J. - Vrba, J.
(1994) Importance of the river inflow for the spring development of plankton in Římov Reservoir (Czechoslovakia). Ergebnisse der Limnologie. Archiv für Hydrobiologie Beiheft, 40, [-] 51-56 (1994.02.00).
Research non impacted

Nedoma, J. - Porcalová, P. - Komárková, J. - Vyhnálek, V.
(1993) A seasonal study of phosphorus deficiency in a eutrophic reservoir. Freshwater Biology, 30 [3] 369-376 (1993).
Research impacted

Nedoma, J. - Porcalová, P. - Komárková, J. - Vyhnálek, V.
(1993) Phosphorus Deficiency Diagnostics in the Eutrophic Římov Reservoir. Water Science and Technology, 28 [6] 75-84 (1993).
Research impacted

Vrba, J. - Šimek, K. - Nedoma, J. - Hartman, P.
(1993) 4-Methylumbelliferyl-β-N-Acetylglucosaminide Hydrolysis by a High-Affnity Enzyme, a Putative Marker of Protozoan Bacterivory. Applied and Environmental Microbiology, 59 [9] 3091-3101 (1993).
Research impacted

Vyhnálek, V. - Seďa, J. - Nedoma, J.
(1993) Fate of the spring phytoplankton bloom in Římov Reservoir (Czechoslovakia): Grazing, lysis and sedimentation. In: Proceeding of the International Association for Theoretical and Applied Limnology. Congress in Barcelona 1992. - Part 2. - (Ed. Sládečková, A.). - Stuttgart, E. Schweizerbart'sche Verlagsbuchhandlung 1993. - S. 1192-1195.
Others