Centre of Plant Structural and Functional Genomics | of the Institute of Experimental Botany AS CR

Doc. Ing. Jaroslav Doležel, DrSc.

Position:

head of centre

Phone:

+420 585 238 703

Fax:

+420 585 238 704

E-mail:

dolezel

ueb [dot] cas [dot] cz

Address:

Sokolovská 6, 77200 Olomouc, Czech Republic

Room number:

Curriculum vitae

Academic degrees

M.Sc., University of Agriculture, Brno (1978), Genetics and Plant Breeding
Ph.D., Czechoslovak Academy of Sciences, Prague (1983), Plant Cytogenetics
Associate Professor, Palacký University, Olomouc (2001), Botany
DrSc., Academy of Sciences of the Czech Republic (2001), Genetics

Appointments

1985 – 1986	Postdoctoral Fellow, ENEA, C.R.E. Casaccia, Italy
1986 – 1989	Research Worker, Institute of Experimental Botany, Department of Plant Biotechnology, Olomouc, Czech Republic
1990 – present	Head, Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Olomouc, Czech Republic
1992 – 2000	Lecturer, Palacky University, School of Natural Sciences, Department of Cellular Biology and Genetics, Olomouc, Czech Republic
2001 – present	Associate Professor, Palacký University, School of Natural Sciences, Olomouc, Czech Republic

Research interests (last five years)

1989 – present	Analysis of nuclear DNA content using flow cytometry; application of DNA flow cytometry in the analysis of genetic instability in vitro, systematics and taxonomy, including the analysis of intraspecific variation in genome size
1992 – present	Chromosome analysis and sorting using flow cytometry; the use of flow-sorted chromosomes for physical mapping of DNA sequences, construction of chromosome-specific DNA libraries and isolation of molecular markers
1997 – present	Analysis of plant genome organization using in situ hybridization and PCR in situ; isolation and characterization of repetitive DNA sequences
1999 – present	Construction of large-insert DNA libraries, physical genome mapping

Research Grants Received

2	Academy of Sciences of the Czech Republic, Prague	(currently 1)
9	Czech Science Foundation, Prague	(currently 5)
3	Ministry of Education, Youth and Sports, Prague	(currently 1)
1	INTAS, Brussels	(currently 1)
3	International Atomic Energy Agency, Vienna	(currently 1)

Synergistic activities

2000 – present	Co-chairmen, Genetics Improvement Working Group, PROMUSA, Global Programme for Banana and Plantain Improvement (Montpellier, France)
2000 – present	Member of the Scientific Council of the Crop Plant Research Institute, (Prague, Czech Republic)
2001 – present	Member of the Management Committee of the Global Consortium for Musa Genomics (Montpellier, France)
2003 – present	Member of Advisory Board of the Centre of Excellence in Plant Agrobiology and Molecular Genetics, PAGEN (Poznan, Poland)
2003 – present	Member of Scientific Council, School of Natural Sciences, Palacký University (Olomouc, Czech Republic)
2005 – present	Member of Evaluation Panel of the Czech Science Foundation (Prague, Czech Republic)

Teaching and mentoring

1992 – present	Lecturer (General Cytogenetics and Cytotaxonomy), Palacky University, Faculty of Science, Department of Cell Biology and Genetics, Olomouc, http://www.upol.cz
1993 – 2005	9 international training courses
1996 – present	10 Ph.D. students (currently 3)
1998 – present	8 M.Sc. students (currently 2)

Membership in editorial boards of international journals

1995 – present	Chromosome Research, Kluwer Academic Publishers, Dordrecht
1998 – present	Biologia Plantarum, Institute of Experimental Botany, Prague
2002 – present	Journal of Applied Genetics, Institute of Plant Genetics, Poznan
2006 - present	International Journal of plant Genomics, New York

Scientific societies

1990 – present	Czech Society for Histochemistry and Cytochemistry (Prague, Czech Republic), member
1997 – present	International Society for Analytical Cytology (Northbrook, USA), member
1999 – present	European Cytogeneticists Association, (Clermont-Ferrand, France), member
2002 – present	Czech Society for Analytical Cytology (Brno, Czech Republic), vice chairman
2005 – present	Genetics Society of America (Bethesda, USA), member

Honours and awards

41 invited lectures abroad (symposia and universities)
Annual award of the Learned Society of the Czech Republic (1999)
Bronze medal “Pro merito”, Palacký University, Olomouc, Czech Republic (2004)
Elected member of the Learned Society of the Czech Republic (2004)
Elected member of the General Assemblz of the Academy of Sciences of the Cyech Republic (2006)

All User Publications:

2013 (1) 2012 (17) 2011 (19) 2010 (9) 2009 (7) 2008 (11) 2007 (15) 2006 (11) 2005 (13) 2004 (17) 2003 (13) 2000 (1) 1999 (1) 1998 (3) 1996 (1) 1993 (2) 1989 (2) 1988 (1)

Assessment of ploidy and genome constitution of some Musa balbisiana cultivars using DArT markers

Sales, E.K., Butardo, N.G., Paniagua, H.G., Jansen, H., Doležel, J.
PHILIPPINE JOURNAL OF CROP SCIENCE 36 (1), 11-18, 2011
Frequent gene movement and pseudogene evolution is common to the large and complex genomes of wheat, barley, and their relatives

Wicker, T., Mayer, K.F.X., Gundlach, H., Martis, M., Steuernagel, B., Scholz, U., Šimková, H., Kubaláková, M., Choulet, F., Taudien, S., Platzer, M., Feuillet, C., Fahima, T., Budak, H., Doležel, J., Keller, B., Stein, N.
PLANT CELL 23, 1706-1718, 2011 Fulltext: PDF link on intranet only
First survey of the wheat chromosome 5A composition through a next generation sequencing approach

Vitulo, N., Albiero, A., Forcato, C., Campagna, D., Dal Pero, F., Bagnaresi, P., Colaiacovo, M., Faccioli, P., Lamontanara, A, Šimková, H., Kubaláková, M., Perrotta, G., Facella, P., Lopez, L., Pietrella, M., Gianese, G., Doležel, J., Giuliano, G., Cattivelli, L., Valle, G., Stanca, A.M.
PLoS ONE 6 (10), e26421, 2011 Fulltext: PDF link on intranet only
A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat

Rustenholz, C., Choulet, F., Laugier, C., Šafář, J., Šimková, H., Doležel, J., Magni, F., Scalabrin, S., Cattonaro, F., Vautrin, S., Bellec, A., Bergès, H., Feuillet, C., Paux, E.
PLANT PHYSIOLOGY 157 (4), 1596-1608, 2011 Fulltext: PDF link on intranet only
A major invasion of transposable elements accounts for the large size of the Blumeria graminis f.sp. tritici genome.

Parlange, F., Oberhaensli, S., Breen, J., Platzer, M., Taudien, S., Šimková, H., Wicker, T., Doležel, J., Keller, B.
FUNCTIONAL & INTEGRATIVE GENOMICS 11 (4), 671-677, 2011 Fulltext: PDF link on intranet only
An improved consensus linkage map of barley based on flow-sorted chromosomes and single nucleotide polymorphism markers.

Muñoz-Amatriaín, M., Moscou, M.J., Bhat, P.R., Svensson, J.T., Bartoš, J., Suchánková, P., Šimková, H., Endo, T.R., Fenton, R.D., Lonardi, S., Castillo, A.M., Chao, S., Cistué, L., Cuesta-Marcos, A., Forrest, K.L., Hayden, M.J., Hayes, P.M., Horsley, R.D., Makoto, K., Moody, D., Sato, K., Vallés, M.P., Wulff, B.B.H., Muehlbauer, G.J., Doležel, J., Close, T.J.
THE PLANT GENOME 4 (3), 238-249, 2011 Fulltext: PDF link on intranet only
Chromosome isolation by flow sorting in Aegilops umbellulata and Ae. comosa and their allotetraploid hybrids Ae. biuncialis and Ae. geniculata

Molnár, I., Kubaláková, M., Šimková, H., Cseh, A., Molnár-Láng, M., Doležel, J.
PLoS ONE 6 (11), e27708, 2011 Fulltext: PDF link on intranet only
Feasibility of physical map construction from fingerprinted bacterial artificial chromosome libraries of polyploid plant species

Luo, M.-Ch., Ma, Y., You, F. M., Anderson, O. D., Kopecký, D., Šimková, H., Šafář, J., Doležel, J., Gill, B., McGuire, P., Dvořák, J.
BMC GENOMICS 11, 122, 2010 Fulltext: PDF link on intranet only
Development of chromosome-specific BAC resources for genomics of bread wheat

Šafář, J., Šimková, H., Kubaláková, M., Číhalíková, J., Suchánková, P., Bartoš, J., Doležel, J.
CYTOGENETIC AND GENOME RESEARCH 129, 211-223, 2010 Fulltext: PDF link on intranet only
Isolated chromosomes as a new and efficient source of DArT markers for the saturation of genetic maps

Wenzl, P., Suchánková, P., Carling, J., Šimková, H., Huttner, E., Kubaláková, M., Sourdille, P., Paul, E., Feuillet, C., Kilian, A., Doležel, J.
THEORETICAL AND APPLIED GENETICS 121, 465-474, 2010 Fulltext: PDF link on intranet only

Centre of Plant Structural and
Functional Genomics
of the Institute of Experimental Botany AS CR

Profile

Doc. Ing. Jaroslav Doležel, DrSc.

Curriculum vitae

Academic degrees

Appointments

Research interests (last five years)

Research Grants Received

Synergistic activities

Teaching and mentoring

Membership in editorial boards of international journals

Scientific societies

Honours and awards

Centre of Plant Structural and Functional Genomics of the Institute of Experimental Botany AS CR

Profile

Doc. Ing. Jaroslav Doležel, DrSc.

Curriculum vitae

Academic degrees

Appointments

Research interests (last five years)

Research Grants Received

Synergistic activities

Teaching and mentoring

Membership in editorial boards of international journals

Scientific societies

Honours and awards

Centre of Plant Structural and
Functional Genomics
of the Institute of Experimental Botany AS CR