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Proposed theses topics

Proposed by Tomáš Vejchodský   

Title: Deterministic and stochastic modeling in molecular and cell biology  

Description :    Diploma thesis (in Czech)

URL Proposal:  not available

Description / Comments:
This diploma thesis will concern the deterministic and stochastic modeling of chemical systems in terms of ordinary differential equations (ODE) and stochastic simulation algorithms (SSA). The motivation comes from the biology, from the mathematical modeling of gene regulatory networks, cell cycle, circadian rhythms, etc.
Goals of the thesis will specified according to the individual interests of the student. It is possible to concentrate on the numerical methods for partial differential equations (PDE), mathematical modeling, analysis of PDE, or to the stochastic analysis.
The co-advisor of the thesis will be Dr Radek Erban (University of Oxford, UK) and possibly others. There is a possibility of a visit of the group of Dr Radek Erban in Oxford. http://people.maths.ox.ac.uk/erban/
For more information see the attached flier (in Czech).