Publikace09

Publikace za rok 2009

2004, 2005, 2006, 2007, 2008, 2009, 2010, 2011, 2012

Anděra L. Signalling activated by the death receptors of the TNRF family. Biomed Pap. 2009;153:173-180.

Blažková J, Trejbalová K, Gondois-Rey F, Halfon P, Philibert P, Guiguen A, Verdin E, Olive D, Van Lint C, Hejnar J, Hirsch I*. CpG methylation controls reactivation of HIV from latency. Plos Pathog. 2009;5(8):e1000554-e1000554.

Briza T, Kejik Z, Kralova J, Martasek P, Kral V. Synthesis of unsymmetric cyanine dye via merocyanine and their interaction with DNA. Collect Czech Chem Commun. 2009;74:1081-1090.

Brühl H, Cihak J, Niedermeier, M, Denzel A, Gomez MR, Talke Y, Goebel N, Plachý J, Stangassinger M, Mack M*. Important role of IL-3 during initiation of collagen induced arthritis. Arthritis Rheum. 2009;60:1352-1361.

Bubeník J. Genetically modified vaccines augment the efficacy of cancer surgery and chemotherapy. (Editorial). Folia Biol. (Praha) 2009;55(6):199-200.

Dietschy T, Shevelev I, Pena-Dia J, Hühn D, Kuenzle S, Mak R, Miah MF, Hess D, Fey M, Hottiger MO, Janščák P, Stagljar I*. p300-mediated acetylation of the Rothmund-Thomson-syndrome gene product RECQL4 regulates its subcellular localization. J Cell Sci. 2009;122:1258-1267.

Divina P, Kvitkovicova A, Buratti E, Vorechovsky I*. Ab initio prediction of
mutation-induced cryptic splice-site activation and exon skipping. Eur J Hum Genet 2009;17:759-765.

Dostál J, Brynda J, Hrusková-Heidingsfeldová O, Sieglová I, Pichová I, Rezácová P.* The crystal structure of the secreted aspartic protease 1 from Candida parapsilosis in complex with pepstatin A. J Struct Biol. 2009;167:145-152.

Dráberová E, Sulimenko V, Sulimenko T, Böhm KJ, Dráber P*. Recovery of tubulin functions after freeze-dying in the presence of trehalose. Anal Biochem. 2010;397:67-72.

Drahota J, Lipoldová M, Volf P, Rohoušová I*. Specificity of anti-saliva immune response in mice repeatedly bitten by Phlebotomus sergenti. Parasite Immunol. 2009;31:766-770.

Ferjentsik Z, Šindelka R, Jonák J*. Expression patterns of Src-family tyrosine kinases during Xenopus laevis development. Int J Dev Biol. 2009;53:163-168.

Fujimura N, Taketo MM, Mori M, Kořínek V, Kozmik Z*.Spatial and temporal regulation of Wnt/beta-catenin signaling is essential for development of the retinal pigment epithelium.
Dev Biol. 2009;334:31-45.

Furugaki K*, Pokorna K*, le Pogam C, Aoki M, Reboul M, Bajzik V, Krief P, Janin A, Noguera M-E, West R, Charron D, Chomienne C, Pla M, Moins-Teisserenc H, Padua R A. DNA vaccination combinated with all-trans retinoic acid treatment induces long term survival and elicits specific immune responses requiring CD4+ and CD8+ T-cell activation in an acute promyelocytic leukemia mouse model. Blood, 2010 Jan 21;115(3):653-6. Epub 2009 Nov 19.

Gamper I, Koh KR, Ruau D, Ullrich K, Bartůňková J, Piroth D, Hacker C, Bartůněk P, Zenke M*. GAR22: A novel target gene of thyroid hormone receptor causes growth inhibition in human erythroid cells. Exp Hematol. 2009;37:539-548.

Gusareva ES, Bragina EJ, Buinova SN, Chernyak BA, Puzyrev VP, Ogorodova LM, Lipoldová M*. Chromosome 12q24.3 controls sensitization to cat allergen in patients with asthma from Siberia, Russia. Immunol Lett. 2009;125:1-6.

Gusareva ES, Havelková H, Blažková H, Kosařová M, Kučera P, Král V, Salyakina D, Müller-Myhsok B, Lipoldová M*. Mouse to human comparative genetics reveals a novel immunoglobulin E-controlling locus on Hsa8q12. Immunogenetics. 2009 Jan;61(1):15-25.

Huranová M, Hnilicová J, Fleischer B, Cvačková Z, Staněk D*. A mutation linked to retinitis pigmentosa in HPRP31 causes protein instability and impairs its interactions with spliceosomal snRNPs. Hum Mol Genet. 2009;18:2014-2023.

Huranová M, Jablonski JA, Benda A, Hof M, Staněk D, Caputi M*. In vivo detection of RNA-binding protein interactions with cognate RNA sequences by fluorescence resonance energy transfer. RNA. 2009;15:2063-2071.

Indrová M*, Bieblová J, Rossowska J, Kuropka P, Pajtasz-Piasecka E, Bubeník J, Reiniš M. HPV 16-associated tumours: IL-12 can repair the absence of cytotoxic and proliferative responses of tumour infiltrating cells after chemotherapy. Int J Oncol. 2009;34:173-180.

Jackson SP*, Bartek J. The DNA-damage response in human biology and disease. Nature. 2009;461:1071-1078.

Janečková H*, Veselý P, Chmelík R. Proving tumour cells by acute nutritional/energy deprivation as a survival threat: a task for microscopy. Anticancer Res. 2009;29:2339-2345.

Katsetos CD*, Dráberová E, Legido A, Dráber P. Tubulin targets in the pathobiology and therapy of glioblastoma multiforme. II. Gamma-tubulin. J Cell Physiol. 2009;221:514-520.

Katsetos CD*, Dráberová E, Legido A, Dumontet C, Dráber P. Tubulin targets in the pathobiology and therapy of glioblastoma multiforme. I. class III beta-tubulin. J Cell Physiol. 2009;221:505-513.

Kemal KS, Reinis M, Weiser B, Burger H. Methods for viral RNA isolation and PCR amplification for sequencing of near full-length HIV-1 genomes. Methods Mol Biol. 2009;485:3-14.

Klener P.Jr, Leahomschi S, Molinsky J, Simonova T, Nečas E, Gašová Z, Čermák J, Doležalová L, Anděra L, Živný J*. TRAIL-induced apoptosis of HL60 leukemia cells: Two distinct phenotypes of acquired TRAIL resistance that are accompanied with resistance to TNFa but not to idarubicin and cytarabine. Blood Cells Mol Dis. 2009;42:77-84.

Klíma M, Zájedová J, Doubravská L, Anděra L*. Functional analysis of the posttranslational modifications of the death receptor 6. Bioch Biophys Acta-Mol Cell Res 2009; 1793:1579-1587.

Kohoutová J, Kutá Smatanová I, Brynda J, Lapkouski M, Revuelta JL, Arellano JB, Ettrich R. Crystallization and preliminary crystallographic characterization of the extrinsic PsbP protein of photosystem II from Spinacia oleracea. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 1;65:111-115.

Kovář J*, Ehrlichová M, Šmejkalová B, Zanardi I, Ojima I, Gut I. Comparison of cell death-inducing effect of novel taxane SB-T-1216 and paclitaxel in breast cancer cells. Anticancer Research. 2009;29:2951-2960.

Kralova J, Kejik Z, Briza T, Pouckova P, Kral A, Martasek P, Kral V*. Porphyrin–cyclodextrin conjugates as a nanosystem for versatile drug delivery and multimodal cancer therapy. J. Med. Chem. 2009; 53:128-138.

Kučera A, Pýcha K, Pajer P, Špíšek R*, Škába R. Dendritic cell-based immunotherapy induces transient clinical response in advanced rat fibrosarcoma - comparison with preventive anti-tumour vaccination. Folia Biol. 2009;55:119-125.

Kurey I, Kobets T, Havelková H, Slapničková M, Quan L, Trtková K, Grekov I, Svobodová M, Stassen APM, Hutson A, Demant P, Lipoldová M*. Distinct genetic control of parasite elimination, dissemination, and disease after Leishmania major infection. Immunogenetics. 2009;61:619-633.

Linka M*, Brůčková M, Malý M, Vandasová J, Stanková M, Reiniš M. A study of HIV-1 genetic diversity in the Czech Republic: 1986-2007. Cent Eur J Publ Hlth. 2009;16:175-177.

Lipoldová M*, Havelková H, Badalová J, Vojtíšková J, Quan L, Krulová M, Sohrabi Y, Stassen APM, Demant P. Loci controlling lymphocyte production of interferon gamma after alloantigen stimulation in vitro and their co-localization with genes controlling lymphocyte infiltration of tumors and tumor susceptibility. Cancer Immunol Immunother. 2009 Aug 5. [Epub ahead of print]

Lukáš J, Mazna P, Valenta T, Doubravská L, Pospíchalová V, Vojtěchová M, Fafílek B, Ivánek R, Plachý J, Novák J, Kořínek V*. Dazap2 modulates transcription driven by the Wnt effector TCF-4. Nucl Acids Res. 2009;37:3007-3020.

Mihola O, Trachtulec Z, Vlcek C, Schimenti JC, Forejt J. A mouse speciation gene encodes a meiotic Histone H3 methyltransferase. Science 2009;323:373-375.

Morrison BJ, Anděra L, Reynolds BA, Ralph SJ, Neužil J*. Future use of mitocans against tumour-initiating cells? Mol Nutr Food Res. 2009;53:147-153.

Mořkovský L, Storchová R*, Plachý J, Ivánek R, Divina P, Hejnar J. The Chicken Z Chromosome Is Enriched for Genes with Preferential Expression in Ovarian Somatic Cells. J Mol Evol. 2009 Dec 27. [Epub ahead of print]

Mucksová J, Brillard J-P, Hejnar J, Poplštejn M, Kalina J, Bakst M, Yan H, Trefil P*. Identification of various testicular cell populations in pubertal and adult cockerels. Anim Reprod Sci. 2009;114:415-22.

Nováková Z, Hubáčková S, Košař M, Janderová-Rossmeislová L, Dobrovolná J, Vašicová P, Vančurová M, Hořejší Z, Hozák P, Bartek J*, Hodný Z*. Cytokine expression and signaling in drug-induced cellular senescence. Oncogene. 2010 Jan 14;29(2):273-84. Epub 2009 Oct 5.

Oikonomou E, Kosmidou V, Katseli A, Kothonidis K, Mourtzoukou D, Kontogeorgo, G, Anděra L, Zografos G, Pintzas A*. TRAIL receptor upregulation and the implication of KRAS/BRAF mutations in human colon cancer tumours. Int J Cancer. 2009;125:2127-2135.

Pajer P, Karafiát V, Pečenka V, Průková D, Dudlová J, Plachý J, Kašparová P, Dvořák M*.
Industasis, a promotion of tumor formation by nontumorigenic stray cells. Cancer Res. 2009;69:4605-4612.

Pávek P*, Pospěchová K, Švecová L, Syrová Z, Stejskalová L, Blažková J, Dvořák Z, Blahoš J. Intestinal cell-specific vitamin D receptor (VDR)-mediated transcriptional regulation of CYP3A4 gene. Biochem Pharmacol. 2010;79:277-287.

Peková S*, Ivánek R, Dvořák M, Rueggeberg S, Leicht S, Li X, Franz T, Kozak T, Vrba J, Koza V, Karas M, Schwarz J, Cetkovský P, Průcha M. Molecular variability of FLT3/ITD mutants and their impact on the differentiation program of 32D cells: Implications for the biological properties of AML blasts. Leuk Res. 2009;33:1409-1416.

Procházková J, Frič J, Pokorná K, Neuwirth A, Krulová M, Zajícová A, Holáň V*. Distinct regulatory roles of transforming growth factor-beta and interleukin-4 in the development and maintenance of natural and induced CD4+ CD25+ Foxp3+ regulatory T cells. Immunology. 2009;128:e670-e678.

Prudnikova T, Mozga T, Rezacova P, Chaloupkova R, Sato Y, Nagata Y, Brynda J, Kuty M, Damborsky J, Smatanova IK. Crystallization and preliminary X-ray analysis of a novel haloalkane dehalogenase DbeA from Bradyrhizobium elkani USDA94. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009;65:353-356.

Rezácová P*, Pokorná J, Brynda J, Kozísek M, Cígler P, Lepsík M, Fanfrlík J, Rezác J, Grantz Sasková K, Sieglová I, Plesek J, Sícha V, Grüner B, Oberwinkler H, Sedlácek J, Kräusslich HG, Hobza P, Král V, Konvalinka J. Design of HIV protease inhibitors based on inorganic polyhedral metallacarboranes. J Med Chem. 2009;52:7132-7141.

Růžičková J, Piatigorsky J, Kozmik Z*. Eye-specific expression of an ancestral jellyfish PaxB gene interferes with Pax6 function despite its conserved Pax6/Pax2 characteristics.
Int J Dev Biol. 2009;53:469-482.

Sanderová H, Tiserová H, Barvík I, Sojka L, Jonák J, Krásný L*. The N-terminal region is crucial for the thermostability of the G-domain of Bacillus stearothermophilus EF-Tu. Biochim Biophys Acta. 2010;1804:147-155.

Sasková KG, Kozísek M, Rezácová P, Brynda J, Yashina T, Kagan RM, Konvalinka J.* Molecular characterization of clinical isolates of human immunodeficiency virus resistant to the protease inhibitor darunavir.J Virol. 2009;83:8810-8848.

Shaik GM, Dráberová L, Heneberg P, Dráber P*. Vacuolin-1-modulated exocytosis and cell resealing in mast cells. Cell Signal. 2009;21:1337-1345.

Stachura DL, Reyes JR, Bartůněk P, Paw BH, Zon LI, Traver D. Zebrafish kidney stromal cell lines support multilineage hematopoiesis. Blood. 2009;114:279-289.

Strnad H, Lacina L, Kolář M, Čada Z, Vlček, Č, Dvořánková B, Betka J, Plzák J, Chovanec M, Šáchová J, Valach J, Urbanová M, Smetana K, Jr*. Head and neck squamous cancer stromal fibroblasts produce growth factors influencing phenotype of normal human keratinocytes.
Histochem Cell Biol. 2010 Feb;133(2):201-11. Epub 2009 Nov 19.

Svoboda P, Stein P. RNAi Experiments in Mouse Oocytes and Early Embryos. CSH Protocols 2009; vol. 2009(1): doi/10.1101/pdb.top56.

Svoboda P. Cloning and Sequencing an Inverted Repeat. CSH Protocols 2009; vol. 2009(1): doi:10.1101/pdb.ip64.

Svoboda P. Cloning a Transgene for Transgenic RNAi in Mouse Oocytes. CSH Protocols 2009; vol. 2009(1): doi/10.1101/pdb.prot5134.

Svoboda P. Preparation of dsRNA for Microinjection Experiments in Mouse. CSH Protocols 2009; vol. 2009(1): doi/10.1101/ pdb.prot5131.

Turečková J, Vojtěchová M, Krausová M, Šloncová E, Kořínek V. Focal Adhesion Kinase Functions as an Akt Downstream Target in Migration of Colorectal Cancer Cells. Translat Oncol. 2009;2:281-290.

Uhlik O, Jecna K, Mackova M, Vlcek C, Hroudova M, Demnerova K, Paces V, Macek T*. Biphenyl-metabolizing bacteria in the rhizosphere of horseradish and bulk soil contaminated by polychlorinated biphenyls as revealed by stable isotope probing. Appl Environ Microbiol. 2009 75:6471-6477.

Veselý P, Rösel D, Paňková D, Tolde O, Blase C, Matoušková E, Folk P, Brábek J*, Bereiter-Hahn J. Confocal microscopy reveals Myzitiras and Vthela morphotypes as new signatures of malignancy progression. Scanning. 2009;31:102-106.

Vopálenský P, Kozmik Z*. Eye evolution: common use and independent recruitment of genetic components. Phil Trans Roy Soc B - Biol Sci. 2009;364:2819-2832.

Wolfova J, Smatanova IK, Brynda J, Mesters JR, Lapkouski M, Kuty M, Natalello A, Chatterjee N, Chern SY, Ebbel E, Ricci A, Grandori R, Ettrich R, Carey J. Structural organization of WrbA in apo- and holoprotein crystals.Biochim Biophys Acta. 2009;1794:1288-1298.

Wu W, Slaastad HS, de la Rosa Carrillo D, Frey T, Tjonnfjord GE, Boretti E, Aasheim HC, Horejsi V, Lund-Johansen F. Antibody array analysis with label-based detection and resolution of protein size. Mol Cell Proteomics. 2009;8:245-527.

Yodh JG, Stevens BC, Kanagaraj R, Janščák P, Ha T*. BLM helicase measures DNA unwound before switching strands and hRPA promotes unwinding reinitiation. EMBO J. 2009;28:405-416.

Zaveska Drabkova L*, Kirschner J, Stepanek J, Zavesky L, Vlcek C. Analysis of nrDNA polymorphism in closely related diploid sexual, tetraploid sexual and polyploid agamospermous species: Implications for the phylogenetic reconstruction of reticulation. Plant Syst. Evol. 2009;278:67-85.

Záveská Drábková L* ,Vlček Č. Mitochondial DNA variation within Juncaceae: Comparison of impact of organelles regions on phylogeny. Plant Syst. Evol. 2009;278:169-186.

Zheng L, Kanagaraj R, Mihaljevic B, Schwendener S, Sartori AA, Gerrits B, Shevelev I, Janščák P*. MRE11 complex links RECQ5 helicase to sites of DNA damage.
Nucl Acids Res. 2009;37:2645-2657.

Zíková M, Corlett A, Bendová Z, Pajer P, Bartůněk P*. DISP3, a sterol-sensing domain-containing protein that links thyroid hormone action and cholesterol metabolism. Mol. Endocrinol. 2009;23:520-528.

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