Laboratory of Plant Biotechnologies

Joint Laboratory of IEB AS CR, v.v.i. and CRI, v.v.i.


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Copyright �2009 by P. Soudek

PUBLICATIONS

1998   1999   2000   2001   2002   2003   2004   2005   2006   2007   2008   2009   2010   2011   2012   2013


1998

Gr�ner, B. - Holub, J. - Plesek, J. - Van�k, T. - Votavov�, H.: High-Performance Liquid Chromatographic Enantiometric Resolution in the Ten-Vertex Carborane Series Comparison of Acetyl- and Native b-Cyclodextrin Bonded Chiral Stationary Phases. Journal of Chromatography A 793 [2], 249-256 (1998).

Hub�lek, M. - Van�k, T.: Degradation of 2,4,6-trinitrotoluene by cell suspension of Solanum aviculare. International Biodeterioration & Biodegradation 42 [4], 251 ( 1998).

Nepov�m, A. - Draho�ov�, H. - Val��ek, P. - Van�k, T.: The Effect of Cultivation Conditions on the Content of Stevioside in Stevia rebaudiana Bertoni Plants Cultivated in the Czech Republic. Pharmaceutical and Pharmacological Letters 8 [1], 19-21 (1998).

Nepov�m, A. - Van�k, T.: In vitro propagation of Stevia rebaudiana plants using multiple shoot culture. Planta Medica 64 [8] 775-776 (1998).

Soudek, P. - Podlipn�, R. - Lipavsk�, H. - Van�k, T.: Bioaccumulation of Heavy Metals by Hairy-root Cultures of Armoracia rusticana L.(I.). Pharmaceutical and Pharmacological Letters 8 [2], 57-60 (1998).

Soudek, P. - Podlipn�, R. - Van�k, T.: Phytoremediation of heavy metals by hairy-root culture of Armoracia rusticana L. Chemical Papers 52 [Focus Issue], 546 (1998).

Valterov�, I. - Van�k, T.: Biotransformace limonenu rostlinn�mi tk��ov�mi kulturami. Chemick� Listy 92 [11], 941-942 (1998).

Zikmundov� M. - Val��ek P. - Van�k T.: Content substances in the species Codonopsis pilosula(Franch.) Nannf. under the conditions of Czech Republic. I. Water soluble substances. Agricultura Tropica et Subtropica 31, 23 - 28 (1998).


1999

Duc, R. - Van�k, T. - Soudek, P. - Schwitzgu�bel, J. P.: Experimentation with rhubard in Europe. Soil & Groundwater Cleanup - [February/March], 27-30 (1999).

Duc, R. - Van�k, T. - Soudek, P. - Schwitzgu�bel, J. P.: Accumulation and transformation of sulfonated aromatic compounds by rhubarb cells (Rheum palmatum). International Journal of Phytoremediation 1 [3] 255-271 (1999).

Truong, T. T. - Val��ek, P. - Nepov�m, A. - Van�k, T.: Correlation between stevioside content in leaves, their surface and the number of roots in plant. Scientia Agriculturae Bohemica 30 [3] 249-255 (1999).

Van�k, T. - Mal�, J. - �aman, D. - �ilhav�, I.: Production of taxanes in a bioreactor by Taxus baccata cells. Planta Medica 65 [3] 275-277 (1999).

Van�k, T. - Valterov�, I. - Vaisar, T.: Biotransformation of (S)-(-)- and (R)-(+)-limonene using Solanum aviculare and Dioscorea deltoidea plant cells. Phytochemistry 50, 1347-1351 (1999).

Van�k,T. - Valterov�, I. - Va�kov�, R. - Vaisar, T.: Biotransformation of (-)-limonene using Solanum aviculare and Dioscorea deltoidea immobilized plant cells. Biotechnology Letters 21, 625-628 (1999).

Vesel�, D. - �aman, D. - Valterov�, I. - Van�k, T.: Seasonal variations in the content of taxanes in the bark of Taxus baccata L. Phytochemical Analysis 10, 319-321 (1999).


2000

Nepov�m, A. - Zeman, S. - Van�k, T." Tk��ov� kultury vy���ch rostlin - model pro studium enzymatick� degradace v�bu�nin. Chemick� Listy 94 [8] 746-747 (2000).

�ilhav�, I. - Lipavsk�, H. - Van�k, T.: Influence of different sugar regimes on the growth of callus culture of Taxus baccata L. and the production of taxanes. Korean Journal of Plant Tissue Culture 27 [5] 401-405 (2000).

Van�k, T. - Nepov�m, A. - Zeman, S.: Phytoremediation of selected explosives in a model system of plant tissue cultures. Korean Journal of Plant Tissue Culture 27 [5] 395-399 (2000).


2001

�pirochov�, I. - Pun�och��ov�, J. - Kafka, Z. - Kubal, M. - Soudek, P. - Van�k, T. Studium kumulace t�k�ch kov� v rostlin�ch. Chemick� Listy 95 [5], 335-336 (2001).

Van�k, T. - Nepov�m, A. - Val��ek, P.: Determination of stevioside in plant material and fruit teas. Journal of Food Composition and Analysis 14, 383-388 (2001).

Van�k, T. - Soudek, P. - Tykva, R.: Study of radiophytoremediation. Minerva Biotecnologica 13, 177-121 (2001).


2002

Collins, C. - Laturnus, F. - Nepov�m, A.: Remediation of BTEX and Trichloroethene - A Review of Current Knowledge with Special Emphasis on Phytoremediation. Environmental Science and Pollution Research 9, 86-94 (2002).

Snellinx, Z. - Taghavi, S. - Nepovim, A. - Vanek, T. - van der Lelie, D. Biological remediation of nitroaromatic-based explosives. Environmental Science and Pollution Research 9, 48-61 (2002).

Koko�ka, L. - Polesn�, Z. - Rada, V. - Nepov�m, A. - Van�k, T.: Screening of some Siberian medicinal plants for antimicrobial activity. Journal of Ethnopharmacology 82 [1] 51-53 (2002).


2003

Van�k, T. - Nepov�m, A. - Podlipn�, R. - Zeman, S. - V�gner, M.: Phytoremediation of Selected Explosives. Water, Air, & Soil Pollution: Focus 3, 259-267 (2003).

Kali�ov�-�pirochov�, I. - Pun�och��ov�, J. - Kafka, Z. - Kubal, M. - Soudek, P. - Van�k, T.: Accumulation of Heavy Metals by in vitro cultures of plants. Water, Air, & Soil Pollution: Focus 3, 269 - 276 (2003).

Van�k, T. - Novotn�, M. - Podlipn�, R. - Valterov�, I. - �aman, D.: Biotransformation of Citronellal by Solanum aviculare Plant Cells - Preparation of Allelopathic (+)-p-Menthane-3,8-diols and determination their absolute configuration. Journal of Natural Products 66, 1239-1241 (2003).

Lindmark-Henriksson, M. - Isaksson, D. - Sj�din, K. - H�gberg, H.E. - Van�k, T. - Valterov�, I.: Transformation of a-pinene using Picea abies Suspension Culture. Journal of Na�ural Products 66, 337-343 (2003).

Blagoeva, E. - Malbeck, J.- Gaudinov�, A. - Van�k, T.- Va�kov�, R.: Cyclin-dependent kinase inhibitor, roscovitine, in combination with exogenous cytokinin, N6-benzyladenine, causes increase of cis-cytokinins in immobilized tobacco cells. Biotechnology Letters 25, 469-472 (2003).

Langhansov�, L. - Konr�dov�, H. - Van�k, T.: Polyethylene glycol and abscisic acid improves maturation and regeneration of Panax ginseng somatic embryos. Plant Cell Reports 22 (10), 725-730 (2003).


2004

Lindmark-Henriksson, M. - Isaksson, D. - Van�k, T. - Valterov�, I. - H�gberg, H.E. - Sj�din, K.: Transformation of terpenes using a Picea abies suspension culture. Journal of Biotechnology 107, 173-184 (2004).

Soudek, P. - Tykva, R. - Van�k, T.: Laboratory analyses of 137Cs phytoremediation. Chemosphere 55, 933-1007 (2004)

Nepov�m, A. - Podlipn�, R. - Soudek, P. - Schr�der, P. - Van�k T.: Effects of heavy metals and nitroaromatic compounds on horseradish glutathione S-transferase and peroxidase. Chemosphere 57, 1007-1015 (2004)

Soudek, P. - Podrack�, E. - V�gner, M. - Van�k, T. - Pet��k, P. - Tykva, R.: 226Ra uptake from soilsinto different plant species. Journal of Radioanalytical and Nuclear Chemistry 262, 187-189 (2004)

Golan-Goldhirsh, A. - Barazani, O. - Nepov�m, A. - Soudek, P. - Smr�ek, S. - Dufkov�, L. - K�enkov�, �. - Yrjala, K. - Sch�der, P. - Van�k, T.: Plant response to heavy metals and organic pollutants in cell culture and at whole plant level. Journal of Soils and Sediments 4, 133-140 (2004)


2005

Nepov�m, A.- Hebner, A. - Soudek, P. - Gerth, A. - Thomas, H. - Smr�ek, S. - Van�k T.: Degradation of 2,4,6-trinitrotoluene by selected helophytes. Chemosphere 60, 1454-1461 (2005)

Soudek, P. - Podlipn�, R. - Mar��k, P. - Van�k, T.: Optimalization of the peroxidase production by tissue cultures of horseradish in vitro. Biologia Plantarum 49 [4], 487-492 (2005)

Mar��k, P. - Koko�ka, L. - Landa, P. - Nepov�m, A. - Soudek, P. - Van�k, T.: In vitro inhibitory effects of thymol and quinones of Nigella sativa seeds on cyclooxygenase-1 and -2 catalyzed prostaglandin E2 biosyntheses. Planta Medica 71, 739-742 (2005)

Langhansov�, L. - Mar��k, P. - Van�k, T.: Production of saponins from Panax ginseng suspension and adventitious root cultures. Biologia Plantarum 49 [3], 463-465 (2005)

Koko�ka, L. - Havl�k, J. - Valterov�, I. - Nepov�m, A.- Rada, V. - Van�k, T.: Chemical composition of the essential oil of Nigella orientalis L. seeds. Flavour and Fragrance Journal 20, 419�420 (2005)

Koko�ka, L. - Janovsk�, D. - Rada, V. - Nepov�m, A. - Van�k, T.: In vitro antibacterial activity of four Leuzea species. Pharmaceutical Biology 43, 8-11 (2005)

Klou�ek, P. - Landa, P. - Van�k, T.: Rostliny in vitro - tov�rny na l��iva? �iva 6, 246-248 (2005)

Landa, P. - Havl�k, J. - Koko�ka, L.: Mo�nosti vyu�it� a p�stov�n� rodu �ernucha v �R. �roda 53 (2), 54-55 (2005)


2006

Soudek, P. - Tykva, R. - Va�kov�, R. - Van�k, T.: Accumulation of radioiodine from aqueous-solution by sunflower (Helianthus annuus L.) at the laboratory scale. Environmental and Experimental Botany 57 [3], 220-225 (2006)

Soudek, P. - V�chov�, L. - Valenov�, �. - Podlipn�, R. - Mal�, J. - Van�k, T.: Arsenic and their uptake by plants. Chemick� Listy 100 [5], 326-329 (2006)

Soudek, P. - Valenov�, �. - Van�k, T.: 137Cs and 90Sr  uptake by sunflower cultivated under hydroponic condition. Journal of Environmental Radioactivity 88 [3], 236-250 (2006)

Landa, P. - Mar��k, P. - Van�k, T. - Rada, V. - Koko�ka, L.: In vitro anti-microbial activity of extracts from the callus cultures of some Nigella species. Biologia 61 [3], 285-288 (2006)

Langhansov�, L. - Mar��k, P. - Landa, P. - Van�k, T.: Biotechnology methods for plant biomass production under controlled conditions. Acta Horticulturae 723, 263-268 (2006)


2007

Soudek, P. - Pet��k, P. - V�gner, M. - Tykva, R. - Plojhar, V. - Petrov�, �. - Van�k, T.: Botanical survey and screening of plant species which accumulate 226Ra from contaminated soil of uranium waste depot. European Journal of Soil Biology 43 [4], 251-261 (2007)

Podlipn�, R. - Nepov�m, A. - Soudek, P. - V�gner, M. - Van�k, T.: Soapwort oxidoreductase is involved in trinitrotoluene detoxification. Biologia Plantarum 2, 367-371 (2007)

Dvo��kov�, M. - Valterov�, I. - Van�k, T.: Biotransformation of a monoterpene mixture by in vitro cultures of selected conifer species. Natural Product Communications 2(3), 233-238 (2007)

Soudek, P. - Petrov�, �. - Bene�ov�, D. - Tykva, R. - Va�kov�, R. - Van�k, T.: Comparison of 226Ra nuclide from soil by three woody species Betula pendula, Sambucus nigra and Alnus glutinosa during the vegetation period. Journal of Environmental Radioactivity 97(1), 76-82 (2007)

Schroder, P. - Navarro-Avino, J - Azaizeh, H. - Golan-Goldhirsh, A. - DiGregorio, S. - Komives, T. - Langergraber, G. - Lenz, A. - Maestri, E. - Memon, A.R. - Ranallill, A. - Sebastiani, L.  Smr�ek, S. - Van�k, T. - Vuilleumier, S. - Wissing, F.: Using phytoremediation technologies to upgrade waste water treatment in Europe. Environmental Science and Pollution Research 14(7): 490-497 (2007)

Mal�, J. - M�chov�, P. - Cvr�kov�, H. - Van�k, T.: Heavy metals uptake by hybrid aspen and rowan � tree clones. Journal of Forest Science 53(11), 491-497 (2007)

Mal�, J. - M�chov�, P. - Cvr�kov�, H. - ��kov�, L. - Soudek, P.: Effective micropropagation of mature aspen: Use in breeding. Acta Horticulturae 764, 239-246 (2007)


2008

Soudek, P. - Petrov�, �. - Bene�ov�, D. - Kotyza, J. - Van�k, T.: Fytoremediation and possibilities of increasing its effectivity. Chemick� listy 102 [5], 346-352 (2008)

Podlipn�, R. - Fialov�, Z. - Van�k, T.: Toxic effect of nitroesters on plant tissue cultures. Plant Cell, Tissue and Organ Culture 94 [3], 305-311 (2008)

Janovsk�, D. - Klou�ek, P. - Urban, J. - Van�k, T. - Rada, V. - Koko�ka, L.: Susceptibility of some clinical isolates of Staphylococcus aureus to fractions from the aerial parts of Leuzea carthamoides. Biologia 63 [5], 607-609 (2008)

Ovesn�, J. - Slab�, O. - Toussaint, O. - Kod��ek, M. - Mar��k, P. - Pouchov�, V. - Van�k, T.: High throughput �omics� approaches to assess the effects of phytochemicals in human health studies. British Journal of Nutrition 99 [E-Suppl. 1], ES130�ES137 (2008)


2009

Kotyza, J. - Soudek, P. - Kafka, Z. - Van�k, T.: Pharmaceuticals - "New" Environmental Polutant. Chemick� Listy 103 [7], 540-547 (2009)

Landa, P. - Koko�ka, L. - P�ibylov�, M. - Van�k, T. - Mar��k, P.: In vitro anti-inflammatory activity of carvacrol: Inhibitory effect on COX-2 catalyzed prostaglandin E-2 biosynthesis. Archives of Pharmacal Research 32 [1], 75-78 (2009)

Landa, P. - Mar��k, P. - Havl�k, J. - Klou�ek, P. - Van�k, T. - Koko�ka, L.: Evaluation of antimicrobial and anti-inflammatory activities of seed extracts from six Nigella species. Journal of Medicinal Food 12 [2], 408-415 (2009)

Stod�lkov�, E. - Kola��k, M. - K�esinov�, Z. - Kuzma, M. - �ulc, M. - Man, P. - Nov�k, P. - Mar��k, P. - Landa, P. - Ol�ovsk�, J. - Chud��kov�, M. - Pa�outov�, S. - �ern�, J. - Bella, J. - Flieger, M.: Hydroxylated anthraquinones produced by Geosmithia species. Folia Microbiologica 54 [3], 179�187 (2009)

Soudek, P. - Kotyza, J. - Lenikusov�, I. - Petrov�, �. - Bene�ov�, D. - Van�k, T.: Accumulation of heavy metals in hydroponically cultivated garlic (Allium sativum L.), onion (Allium cepa L.) leek (Allium porrum L.) and chive (Allium schoenoprasum L.). Journal of Food Agriculture & Environment 7 [3&4], 761-769 (2009)

Schwitzguebel, J.-P. - Kumpiene, J. - Comino, E. - Van�k, T.: From green to clean: a promising and sustainable approach towards environmental remediation and human health for the 21st century.  Agrochimica LIII [4], 209-217 (2009)

Pet��k, P. - Soudek, P. - Bene�ov�, D. - Najmanov�, P. - Najman, M. - Van�k, T.: Flora of toxic depots in selected industrial zones. Acta Societatis Botanicorum Poloniae 78 [4], 327-334 (2009)

Amigues, E.J. - Armstrong, E. - Dvo��kov�, M. - Migaud, M.E. - Huang, M.: β-1,2,3-triazolyl-nucleosides as nicotinamide riboside mimics.  Nucleosides, Nucleotides and Nucleic Acids 28 [3], 238-259 (2009) 


2010

Soudek, P. - Petrov�, �. - Bene�ov�, D. - Kotyza, J. - V�gner, M. - Va�kov�, R. - Van�k, T.: Study of soil-plant transfer of 226Ra under greenhouse conditions. Journal of Environmental Radioactivity 101[6], 446-450 (2010)

Kotyza, J. - Soudek, P. - Kafka, Z. - Van�k, T.: Phytoremediation of pharmaceuticals � preliminary study. International Journal of Phytoremediation  12 [3], 306-316 (2010)

Soudek, P. - Katru��kov�, A. - Sedl��ek, L. - Petrov�, �. - Ko��, V. - Mar��k, P. - Griga, M. - Van�k, T.: Effect of heavy metals on inhibition of root elongation in twenty three cultivars of flax (Linum usitatissimum L.). Archives of Environmental Cotamination and Toxicology 59[2], 194-203 (2010) 

Soudek, P. - Petrov�, �. - Bene�ov�, D. - Van�k, T.: Phytoextraction of toxic metals by sunflower and corn plants. Journal of Food Agriculture & Environment 8 [3&4], 383-390 (2010)

P�ibylov�, M. - Dvo��kov�, M. - Van�k, T.: Paclitaxel derivatives for targeted delivery to cancer cells Chemick� Listy 104, 1023-1028 (2010)

Landa, P. - �torchov�, H. - Hodek, J. - Va�kov�, R. - Podlipn�, R. - Mar��k, P. - Ovesn�, J. - Van�k, T.: Transferases and transporters mediate the detoxification 5 and capacity to tolerate trinitrotoluene in ArabidopsisFunctional & Integrative Genomics 10, 547�559 (2010)

Podlipn�, R. - Fialov�, Z. - Van�k, T.: Degradation of nitroesters by plant tissue cultures. Journal of Hazardous Materials 184, 591�596 (2010) 

Jansk�, A. - Mar��k, P. - Zelenkov�, S. - Ovesn�, J.: Cold stress and acclimation � what is important for metabolic adjustment?  Plant Biology 12 [3], 395�405 (2010) 

Halamov�, K. - Koko�ka, L. - Fle�ar, L. - Skleni�kov�, O. - Svobodov�, B. - Mar��k, P.: In vitro antifungal effect of black cumin seed quinones against dairy spoilage yeasts at different acidity levels. Journal of Food Protection 73 [12], 2291�2295 (2010)


2011

Soudek, P. - Petrov�, �. - Bene�ov�, D. - Van�k, T.: Uranium uptake and stress responses of in vitro cultivated hairy root culture of Armoracia rusticanaAgrochimica LV [1],15-28 (2011) (2011)

Soudek, P. - Petrov�, �. - Bene�ov�, D. - Dvo��kov�, M. -Van�k, T.: Uranium uptake by hydroponically cultivated crop plants. Journal of Environmental Radioactivity 102[6], 598-604 (2011)

Soudek, P. - Petrov�, �. - Van�k, T.: Heavy metal uptake and stress responces of hydroponically cultivated garlic (Allium sativum L.). Environmental and Experimental Botany 74, 289-295 (2011)

��dlov�, P. - Podlipn�, R. - Van�k, T.: Cytotoxic pharmaceuticals in the environment. Chemick� Listy 105[1], 8-14 (2011)

Tesa�ov�, H. - Svobodov�, B. - Koko�ka, L. - Mar��k, P. - P�ibylov�, M. - Landa, P. - Vadlejch, J.: Determination of oxygen radical absorbance capacity of black cumin (Nigella sativa) seed quinone compounds. Natural Product Communications 6[2], 213-216 (2011)

Ho�ek, J. - Barto�, M. - Chud�k,S. -  Dall�Acqua, S. - Innocenti, G. - Kartal, M. - Koko�ka, L. - Koll�r, P. - Kutil, Z. - Landa, P. - Marek, R. - Z�valov�, V. - �emli�ka, M. - �mejkal, K.: Natural compound cudraflavone B shows promising anti-inflammatory properties in vitro. Journal of Natural Products 74[4], 614�619 (2011)

P�ibylov�, M. - Dvo��kov�, M. - Hanu�ov�, V. - Nemethov�, I. - Sk�lov�, L. - Van�k, T.: Paclitaxel conjugation with the analog of the gonadotropin-releasing hormone as a targeting moiety. International Journal of Pharmaceutics 415[1-2], 175-180 (2011)

Podlipn�, R. - Mo�kov�, K. - Van�k, T.: Accumulation of cadmium by halophyte species Juncus gerardii. Ecological Questions 14, 41-42 (2011)

Sirko, A. - Van�k, T. - Gora-Sochacka, A. - Redkiewicz, P.: Recombinant cytokines from plants. International Journal of Molecular Sciences 12[6], 3536-3552 (2011)

Dvo��kov�, M. - Valterov�, I. - �aman, D. -Van�k, T.: Biotransformation of (1S)-2-carene and (1S)-3-carene by Picea abies suspension culture. Molecules 16[12], 10541-10555 (2011)

Dvo��kov�, M. - Valterov�, I. - Van�k, T.: Biocatalytic conversion of turpentine � a wood processing waste � into oxygenated monoterpenes. Biocatalysis and Biotransformation 29[5],204�211 (2011)

Ro�kov�, �. - Nevoral, J. - Rada, V. - Mar��k, P. - Sklen��, J. - Hinkov�, A. - Vlkov�, E. - Marounek, M.: Factors affecting the growth of bifidobacteria in human milk. International Dairy Journal 21, 504-508 (2011)


2012

Soudek, P. - Kinderman, P. - Mar��k, P. - Petrov�, �. - Van�k, T.: Biomonitoring of air pollution in Prague using tree leaves. Journal of Food Agriculture & Environment 10[2], 810-817 (2012)

Petrov�, �. - Bene�ov�, D. - Soudek, P. - Van�k, T.: Enhancement of metal(loid)s phytoextraction by Cannabis sativa L. Journal of Food Agriculture & Environment 10[1], 631-641 (2012)

Petrov�, �. - Soudek, P. - Van�k, T.: Remediation of uranium mining areas in the Czech Republic. Chemick� Listy in press (2012)

Landa, P. - Kutil, Z. - Temml, V. - Vuorinen, A. - Mal�k, J. - Dvo��kov�, M. - Mar��k, P. - Koko�ka, L. - P�ibylov�, M. - Schuster, D. - Van�k T.: Redox and non-redox mechanism of in vitro cyclooxygenase inhibition by natural quinones. Planta Medica 78, 326-333 (2012)

Langhansov�, L. - Mar��k, P. - Van�k, T.: Regulation of tissue differentiation by plant growth regulators on tTCLs of Panax ginseng adventitious roots. Industrial Crops and Products 35[1], 154-159 (2012)

Zia-Ul-Haq, M. - Khan, M.A. - Landa, P. - Kutil, Z. - Ahmed, S. - Qayum, M. - Ahmad, S.: Platelet aggregation and anti-inflammatory effects of garden pea, desi chickpea and kabuli chickpea. Acta Poloniae Pharmaceutica 69, 707-711 (2012)


2013