Šafář Jan

ASEP Publications

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Records found: 14

0382219 - UEB-Q 2013 RIV GB eng J - Journal Article
Bartoš, Jan - Vlček, Čestmír - Choulet, F. - Džunková, Mária - Cviková, Kateřina - Šafář, Jan - Šimková, Hana - Pačes, Jan - Strnad, Hynek - Sourdille, P. - Berges, H. - Cattonaro, F. - Feuillet, C. - Doležel, Jaroslav
Intraspecific sequence comparisons reveal similar rates of non-collinear gene insertion in the B and D genomes of bread wheat.
BMC Plant Biology. Roč. 12, č. 155 (2012), s. 1-10. ISSN 1471-2229
R&D Projects: GA ČR GAP501/10/1778
Not R&D Projects: GA MŠk(CZ) ED0007/01/01
Institutional Support: CEZ:AV0Z50380511; CEZ:AV0Z50520514
Keywords: Wheat * BAC sequencing * Homoeologous genomes
Subject RIV: EB - Genetics & Molecular Biology
Impact factor: 4.354, year: 2012
Permanent link: http://hdl.handle.net/11104/0212507

0423119 - UEB-Q 2014 RIV US eng J - Journal Article
Breen, J. - Wicker, T. - Shatalina, M. - Frenkel, Z. - Bertin, I. - Philippe, R. - Spielmeyer, W. - Šimková, Hana - Šafář, Jan - Cattonaro, F. - Scalabrin, S. - Magni, F. - Vautrin, S. - Berges, H. - Paux, E. - Fahima, T. - Doležel, Jaroslav - Korol, A. - Feuillet, C. - Keller, B.
A Physical Map of the Short Arm of Wheat Chromosome 1A.
PLoS ONE. Roč. 8, č. 11 (2013). ISSN 1932-6203
Institutional Support: CEZ:AV0Z50380511
Keywords: TRITICUM-AESTIVUM L. * EXPRESSED SEQUENCE TAGS * WEIGHT GLUTENIN LOCI
Subject RIV: EB - Genetics & Molecular Biology
Impact factor: 3.534, year: 2013
Permanent link: http://hdl.handle.net/11104/0229355

0349951 - BFU-R 2011 RIV GB eng J - Journal Article
Čegan, Radim - Marais, G.A.B. - Kubeková, Hana - Blavet, N. - Widmer, A. - Vyskot, Boris - Doležel, Jaroslav - Šafář, Jan - Hobza, Roman
Structure and evolution of Apetala3, a sex-linked gene in Silene latifolia.
BMC Plant Biology. Roč. 10, č. 180 (2010), s. 1-10. ISSN 1471-2229
R&D Projects: GA ČR(CZ) GA522/09/0083; GA ČR(CZ) GD204/09/H002; GA AV ČR(CZ) KJB600040901
Institutional Support: CEZ:AV0Z50040507; CEZ:AV0Z50040702; CEZ:AV0Z50380511
Keywords: sex chromosomes evolution * Apetala3 * Silene
Subject RIV: BO - Biophysics
Impact factor: 4.085, year: 2010
Permanent link: http://hdl.handle.net/11104/0190071

0379228 - BFU-R 2013 RIV US eng J - Journal Article
Čegan, Radim - Vyskot, Boris - Kejnovský, Eduard - Kubát, Zdeněk - Blavet, Hana - Šafář, Jan - Doležel, Jaroslav - Blavet, N. - Hobza, Roman
Genomic diversity in two related plant species with and without sex chromosomes - Silene latifolia and S. vulgaris.
PLoS ONE. Roč. 7, č. 2 (2012), e31898. ISSN 1932-6203
R&D Projects: GA AV ČR(CZ) KJB600040901; GA ČR(CZ) GPP501/10/P483; GA ČR(CZ) GAP501/10/0102; GA ČR(CZ) GD204/09/H002; GA ČR(CZ) GAP305/10/0930; GA ČR(CZ) GA522/09/0083
Institutional Support: CEZ:AV0Z50040702; CEZ:AV0Z50040507; CEZ:AV0Z50380511
Keywords: Silene * repetitive DNA * genome size
Subject RIV: BO - Biophysics
Impact factor: 3.730, year: 2012
Permanent link: http://hdl.handle.net/11104/0210483

0381156 - UEB-Q 2013 RIV DE eng J - Journal Article
Doležel, Jaroslav - Vrána, Jan - Šafář, Jan - Bartoš, Jan - Kubaláková, Marie - Šimková, Hana
Chromosomes in the flow to simplify genome analysis.
FUNCTIONAL & INTEGRATIVE GENOMICS. Roč. 12, č. 3 (2012), s. 397-416. ISSN 1438-793X
R&D Projects: GA ČR GAP501/10/1740; GA ČR GAP501/10/1778
Institutional Support: CEZ:AV0Z50380511
Keywords: Chromosome sorting * Chromosome-specific BAC libraries * Chromosome sequencing
Subject RIV: EB - Genetics & Molecular Biology
Impact factor: 3.292, year: 2012
Permanent link: http://hdl.handle.net/11104/0211688

0422267 - UEB-Q 2014 RIV US eng J - Journal Article
Kopecký, David - Martis, M. - Čihalíková, Jarmila - Hřibová, Eva - Vrána, Jan - Bartoš, Jan - Kopecká, Jitka - Cattonaro, F. - Stočes, Štěpán - Novák, Petr - Neumann, Pavel - Macas, Jiří - Šimková, Hana - Studer, B. - Asp, T. - Baird, J. H. - Navrátil, Petr - Karafiátová, Miroslava - Kubaláková, Marie - Šafář, Jan - Mayer, K. - Doležel, Jaroslav
Flow Sorting and Sequencing Meadow Fescue Chromosome 4F.
Plant Physiology. Roč. 163, č. 3 (2013), s. 1323-1337. ISSN 0032-0889
R&D Projects: GA ČR(CZ) GAP501/11/0504; GA MŠk(CZ) OC10037
Not R&D Projects: GA MŠk(CZ) ED0007/01/01
Institutional Support: RVO:61389030 ; RVO:60077344
Keywords: SATELLITE DNA-SEQUENCES * FESTUCA-PRATENSIS * LOLIUM-MULTIFLORUM
Subject RIV: EB - Genetics & Molecular Biology
Impact factor: 7.394, year: 2013
Permanent link: http://hdl.handle.net/11104/0228467

0396782 - UEB-Q 2014 RIV US eng J - Journal Article
Lucas, S. - Akpinar, B.A. - Kantar, M. - Weinstein, Z. - Šafář, Jan - Šimková, Hana - Frenkel, Z. - Berges, H. - Doležel, Jaroslav - Budak, H.
Physical Mapping Integrated with Syntenic Analysis to Characterize the Gene Space of the Long Arm of Wheat Chromosome 1A.
PLoS ONE. Roč. 8, č. 4 (2013). ISSN 1932-6203
Not R&D Projects: GA MŠk(CZ) ED0007/01/01
Institutional Support: CEZ:AV0Z50380511
Keywords: BREAD WHEAT * COMPLEX GENOMES * MAP
Subject RIV: EB - Genetics & Molecular Biology
Impact factor: 3.534, year: 2013
Permanent link: http://hdl.handle.net/11104/0224500

0380697 - UEB-Q 2013 RIV DE eng J - Journal Article
Lucas, S. J. - Šimková, Hana - Šafář, Jan - Jurman, I. - Cattonaro, F. - Vautrin, S. - Bellec, A. - Berges, H. - Doležel, Jaroslav - Budak, H.
Functional features of a single chromosome arm in wheat (1AL) determined from its structure.
FUNCTIONAL & INTEGRATIVE GENOMICS. Roč. 12, č. 1 (2012), s. 173-182. ISSN 1438-793X
Institutional Support: CEZ:AV0Z50380511
Keywords: Wheat * A genome * BAC end sequencing
Subject RIV: EB - Genetics & Molecular Biology
Impact factor: 3.292, year: 2012
Permanent link: http://hdl.handle.net/11104/0211340

0347998 - UEB-Q 2011 RIV US eng J - Journal Article
Luo, M. C. - Ma, Y. Q. - You, F. M. - Anderson, O. D. - Kopecký, David - Šimková, Hana - Šafář, Jan - Doležel, Jaroslav - Gill, B. - McGuire, P. E. - Dvorak, J.
Feasibility of physical map construction from fingerprinted bacterial artificial chromosome libraries of polyploid plant species.
B M C Genomics. Roč. 11, č. 122 (2010), s. 1-8. ISSN 1471-2164
Institutional Support: CEZ:AV0Z50380511
Keywords: BREAD WHEAT * TETRAPLOID WHEAT * GENETIC-MAP
Subject RIV: EB - Genetics & Molecular Biology
Impact factor: 4.206, year: 2010
Permanent link: http://hdl.handle.net/11104/0188629

0429978 - UEB-Q 2015 RIV US eng J - Journal Article
Milec, Zbyněk - Valárik, Miroslav - Bartoš, Jan - Šafář, Jan
Can a late bloomer become an early bird? Tools for flowering time adjustment.
Biotechnology Advances. Roč. 32, č. 1 (2014), s. 200-214. ISSN 0734-9750
R&D Projects: GA ČR GAP501/10/1778; GA ČR GAP501/10/1740
Not R&D Projects: GA MŠk(CZ) ED0007/01/01
Institutional Support: RVO:61389030
Keywords: Flowering * Photoperiod * Vernalization
Subject RIV: EB - Genetics & Molecular Biology
Impact factor: 8.905, year: 2013
Permanent link: http://hdl.handle.net/11104/0234923

0423121 - UEB-Q 2014 RIV GB eng J - Journal Article
Philippe, R. - Paux, E. - Bertin, I. - Sourdille, P. - Choulet, F. - Laugier, Ch. - Šimková, Hana - Šafář, Jan - Bellec, A. - Vautrin, S. - Frenkel, Z. - Cattonaro, F. - Magni, F. - Scalabrin, S. - Martis, M.M. - Mayer, K. F. X. - Korol, A. - Berges, H. - Doležel, Jaroslav - Feuillet, C.
A high density physical map of chromosome 1BL supports evolutionary studies, map-based cloning and sequencing in wheat.
Genome Biology. Roč. 14, č. 6 (2013). ISSN 1465-6906
Institutional Support: CEZ:AV0Z50380511
Keywords: chromosome 1BL * evolution * gene space
Subject RIV: EB - Genetics & Molecular Biology
Impact factor: 10.465, year: 2013
Permanent link: http://hdl.handle.net/11104/0229356

0374549 - UEB-Q 2012 RIV US eng J - Journal Article
Rustenholz, C. - Choulet, F. - Laugier, Ch. - Šafář, Jan - Šimková, Hana - Doležel, Jaroslav - Magni, F. - Scalabrin, S. - Cattonaro, F. - Vautrin, S. - Bellec, A. - Berges, H. - Feuillet, C. - Paux, E.
A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat.
Plant Physiology. Roč. 157, č. 4 (2011), s. 1596-1608. ISSN 0032-0889
R&D Projects: GA MŠk ED0007/01/01
Institutional Support: CEZ:AV0Z50380511
Keywords: LOCAL COEXPRESSION DOMAINS * ARABIDOPSIS-THALIANA * NEIGHBORING GENES
Subject RIV: EB - Genetics & Molecular Biology
Impact factor: 6.535, year: 2011
Permanent link: http://hdl.handle.net/11104/0207446

0349181 - UEB-Q 2011 RIV CH eng J - Journal Article
Šafář, Jan - Šimková, Hana - Kubaláková, Marie - Čihalíková, Jarmila - Suchánková, Pavla - Bartoš, Jan - Doležel, Jaroslav
Development of Chromosome-Specific BAC Resources for Genomics of Bread Wheat.
Cytogenetics and Genome Research. Roč. 129, 1-3 (2010), s. 211-223. ISSN 1424-8581
R&D Projects: GA ČR GA521/07/1573; GA MŠk(CZ) LC06004
Not R&D Projects: European Community’s Seventh Framework Programme(XE) FP7/2007–2013
Institutional Support: CEZ:AV0Z50380511
Keywords: BAC library * Chromosome * DNA markers
Subject RIV: GE - Plant Breeding
Impact factor: 1.783, year: 2010
Permanent link: http://hdl.handle.net/11104/0189489

0364122 - UEB-Q 2012 RIV US eng J - Journal Article
Šimková, Hana - Šafář, Jan - Kubaláková, Marie - Suchánková, Pavla - Čihalíková, Jarmila - Robert-Quatre, Heda - Azhaguvel, P. - Weng, Y. Q. - Peng, J. - Lapitan, N. L. V. - Ma, Y. Q. - You, F. M. - Luo, M. C. - Bartoš, Jan - Doležel, Jaroslav
BAC Libraries from Wheat Chromosome 7D: Efficient Tool for Positional Cloning of Aphid Resistance Genes.
Journal of Biomedicine and Biotechnology. -, č. 302543 (2011), s. 1-11. ISSN 1110-7243
R&D Projects: GA ČR GA521/07/1573; GA MŠk(CZ) LC06004
Institutional Support: CEZ:AV0Z50380511
Keywords: TRITICUM-AESTIVUM L. * HEXAPLOID WHEAT * BREAD WHEAT
Subject RIV: EB - Genetics & Molecular Biology
Impact factor: 2.436, year: 2011
Permanent link: http://hdl.handle.net/11104/0006543