Centre of Plant Structural and
Functional Genomics
of the Institute of Experimental Botany AS CR

2014

• Evaluation of turf-type interspecific hybrids of meadow fescue with perennial ryegrass for improved stress tolerance
  Barnes, B.D., Kopecký, D., Lukaszewski, A.J., Baird, J.H.
  CROP SCIENCE 54, 355-365, 2014 Fulltext: PDF link on intranet only
• Flow cytometry in plant research: A success story
  Vrána, J., Cápal, P., Bednářová, M., Doležel, J.
  Fulltext: PDF link on intranet only
• Molecular mapping of stripe rust resistance gene Yr51 in chromosome 4AL of wheat
  Randhawa, M., Bansal, U., Valárik, M., Klocová, B., Doležel, J., Bariana, H.
  THEORETICAL AND APPLIED GENETICS 127, 317-324, 2014 Fulltext: PDF link on intranet only
• Can a late bloomer become an early bird? Tools for flowering time adjustment
  Milec Z., Valárik M., Bartoš J., Šafář J.
  BIOTECHNOLOGY ADVANCES 32, 200-214, 2014 Fulltext: PDF link on intranet only
• Advances in plant chromosome genomics
  Doležel, J., Vrána, J., Cápal, P., Kubaláková, M., Burešová, V., Šimková, H.
  BIOTECHNOLOGY ADVANCES 32, 122-136, 2014 Fulltext: PDF link on intranet only
• Can a late bloomer become an early bird? Tools for flowering time adjustment
  Milec, Z., Valárik, M., Bartoš, J., Šafář, J.
  BIOTECHNOLOGY ADVANCES 32, 200-214, 2014 Fulltext: PDF link on intranet only
• Emerging technologies advancing forage and turf grass genomics
  Kopecký, D., Studer, B.
  BIOTECHNOLOGY ADVANCES 32, 190-199, 2014 Fulltext: PDF link on intranet only
• The Wheat Black Jack: Advances towards sequencing the 21 chromosomes of bread wheat
  Choulet, F., Caccamo, M., Wright, J., Alaux, M., Šimková, H., Šafář, J., Leroy, P., Doležel, J., Rogers, J., Eversole, K., Feuillet, C.
  Fulltext: PDF link on intranet only
• Computational identification and comparative analysis of miRNAs in wheat group 7 chromosomes
  Deng, P., Nie, X., Wang, L., Cui, L., Liu, P., Tong, W., Biradar, S.S., Edwards, D., Berkman, P., Šimková, H., Doležel, J., Luo, M., You, F., Batley, J., Fleury, D., Appels, R., Weining, S.
  PLANT MOLECULAR BIOLOGY REPORTER 32, 487-500, 2014 Fulltext: PDF link on intranet only
• SNP Discovery for mapping alien introgressions in wheat
  Tiwari, V.K., Wang, S., Sehgal, S., Vrána, J., Friebe, B., Kubaláková, M., Chhuneja, P., Doležel, J., Akhunov, E., Kalia, B., Sabir, J., Gill, B.S.
  BMC GENOMICS 15, 273, 2014 Fulltext: PDF link on intranet only
• Strong accumulation of chloroplast DNA in the Y chromosomes of Rumex acetosa and Silene latifolia
  Steflova, P., Hobza, R., Vyskot, B., Kejnovsky, E.
  CYTOGENETIC AND GENOME RESEARCH 142, 59-65, 2014 Fulltext: PDF link on intranet only
• Flow cytometric chromosome sorting from diploid progenitors of bread wheat, T. urartu, Ae. speltoides and Ae. tauschii
  Molnár, I., Kubaláková, M., Šimková, H., Farkas, A., Cseh, A., Megyeri, M., Vrána, J., Molnár-Láng, M., Doležel, J.
  THEORETICAL AND APPLIED GENETICS 127, 1091-1104, 2014 Fulltext: PDF link on intranet only
• Next-generation survey sequencing and the molecular organization of wheat chromosome 6B
  Tanaka, T., Kobayashi, F., Joshi, G.P., Onuki, R., Sakai, H., Kanamori, H., Wu, J., Šimková, H., Nasuda, S., Endo, T.R., Hayakawa, K., Doležel, J., Ogihara, Y., Itoh, T., Matsumoto, T., Handa, H.
  DNA RESEARCH 21, 103-114, 2014 Fulltext: PDF link on intranet only
• Karyotype analysis in Agropyron cristatum
  Said M., Cabrera A., Doležel J.
  Fulltext: public PDF link
• Molecular and cytogenetic characterization of a common wheat-Agropyron cristatum chromosome translocation conferring resistance to leaf rust
  Ochoa V., Madrid E., Said M., Rubiales D., Cabrera A.
  EUPHYTICA DOI 10.1007/s10681-014-1190-5, , 2014 External fulltext
• Karyotype analysis in Agropyron cristatum
  Said M., Cabrera A., Doležel J.
  Fulltext: public PDF link
• A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome
  Mayer, K.F.X., Rogers, J., Doležel, J., Pozniak, C., Eversole, K., Feuillet, C., Gill, B., Friebe, B., Lukaszewski, A.J., Sourdille, P., Endo, T.R., Kubaláková, M., Číhalíková, J., Dubská, Z., Vrána, J., Šperková, R., Šimková, H., Febrer, M., Clissold, L., McLay, K., Singh, K., Chhuneja, P., Singh, N.K., Khurana, J., Akhunov, E., Choulet, F., Alberti, A., Barbe, V., Wincker, P., Kanamori, H., Kobayashi, F., Itoh, T., Matsumoto, T., Sakai, H., Tanaka, T., Wu, J.Z., Ogihara, Y., Handa, H., Maclachlan, P.R., Sharpe, A., Klassen, D., Edwards, D., Batley, J., Olsen, O.A., Sandve, S.R., Lien, S., Steuernagel, B., Wulff, B., Caccamo, M., Ayling, S., Ramirez-Gonzalez, R.H., Clavijo, B.J., Wright, J., Pfeifer, M., Spannagl, M., Martis, M.M., Mascher, M., Chapman, J., Poland, J.A., Scholz, U., Barry, K., Waugh, R., Rokhsar, D.S., Muehlbauer, G.J., Stein, N., Gundlach, H., Zytnicki, M., Jamilloux, V., Quesneville, H., Wicker, T., Faccioli, P., Colaiacovo, M., Stanca, A.M., Budak, H., Cattivelli, L., Glover, N., Pingault, L., Paux, E., Sharma, S., Appels, R., Bellgard, M., Chapman, B., Nussbaumer, T., Bader, K.C., Rimbert, H., Wang, S.C., Knox, R., Kilian, A., Alaux, M., Alfama, F., Couderc, L., Guilhot, N., Viseux, C., Loaec, M., Keller, B., Praud, S.
  SCIENCE 345(6194), 1251788, 2014 Fulltext: PDF link on intranet only
• Genome-wide analysis of repeat diversity across the family Musaceae
  Novák, P., Hřibová, E., Neumann, P., Koblížková, A., Doležel, J., Macas, J.
  PLoS ONE 9(6), e98918, 2014 Fulltext: PDF link on intranet only
• Structural and functional partitioning of bread wheat chromosome 3B
  Choulet, F., Alberti, A., Theil, S., Glover, N., Barbe, V., Daron, J., Pingault, L., Sourdille, P., Couloux, A., Paux, E., Leroy, P., Mangenot, S., Guilhot, N., Le Gouis, J., Balfourier, F., Alaux, M., Jamilloux, V., Poulain, J., Durand, C., Bellec, A., Gaspin, C., Šafář, J., Doležel, J., Rogers, J., Vandepoele, K., Aury, JM., Mayer, K., Berges, H., Quesneville, H., Wincker, P., Feuillet, C.
  SCIENCE 345(6194), 1249721, 2014 Fulltext: PDF link on intranet only
• Common wheat chromosome 5B composition analysis using low-coverage 454 sequencing
  Sergeeva, E.M., Afonnikov, D.A., Koltunova, M.K., Gusev, V.D., Miroshnichenko, L.A., Vrána, J., Kubaláková, M., Poncet, C., Sourdille, P., Feuillet, C., Doležel, J., Salina, E.A.
  THE PLANT GENOME 7(2), 1-16, 2014 Fulltext: PDF link on intranet only