Publications

Journal articles

• Profant, O.; Škoch, A.; Balogová, Z.; Tintěra, J.; Hlinka, J. & Syka, J. Diffusion tensor imaging and MR morphometry of the central auditory pathway and auditory cortex in aging. Neuroscience, in press, published online 2013: http://dx.doi.org/10.1016/j.neuroscience.2013.12.010
• J. Hlinka, D. Hartman, N. Jajcay, M. Vejmelka, R. Donner, N. Marwan, J. Kurths, M. Paluš: Regional and inter-regional effects in evolving climate network. Nonlinear Processes in Geophysics 21, 451-462, 2014. [link]
• J. Hlinka, D. Hartman, M. Vejmelka, J. Runge, N. Marwan, J. Kurths and M. Paluš: Reliability of inference of directed climate networks using conditional mutual information. Entropy 15(6), 2023-2045, 2013.
  
• J. Hlinka, D. Hartman, M. Vejmelka, D. Novotná and M. Paluš: Non-linear dependence and teleconnections in climate data: sources, relevance, nonstationarity. Climate Dynamics, 42:7-8, 1873-1886, 2014. [arxiv.org:1211.6688]
• Hlinka, J., Coombes, S. Using Computational models to relate structural and functional brain connectivity. European Journal of Neuroscience 36(2), 2137-2145, 2012 
  
• J. Hlinka, D. Hartman, and M. Paluš: Small-world topology of functional connectivity in randomly connected dynamical systems. Chaos 22(3), 033107, 2012 [preprint]
  
• Paluš, M., Hartman, D., Hlinka, J., and Vejmelka, M.: Discerning connectivity from dynamics in climate networks, Nonlin. Processes Geophys., 18, 751-763, doi:10.5194/npg-18-751-2011, 2011.
  

• Hartman, D., Hlinka, J., Paluš, M., Mantini, D., Corbetta, M. The Role of Nonlinearity in Computing Graph-Theoretical Properties of Resting-State Functional Magnetic Resonance Imaging Brain Networks. 2011. Chaos. 013119 

• [paper] - Copyright 2011 American Institute of Physics. This article may be downloaded for personal use only. Any other use requires prior permission of the author and the American Institute of Physics. The following article appeared in Chaos 21, 013119, 2011 and may be found at this [link].

• Hlinka, J., Palus, M., Vejmelka, M., Mantini, D., Corbetta, M. Functional connectivity in resting-state fMRI: Is linear correlation sufficient? 2011, Neuroimage, 54, 2218-2225 [preprint]

• Hlinka, J., Alexakis, C., Diukova, A., Liddle, P.F., Auer, D.P. Slow EEG pattern predicts reduced intrinsic functional connectivity in the default mode network: an inter-subject analysis. 2010, Neuroimage, 53(1):239-246

• Hlinka, J., Alexakis, C., Hardman, J.G., Siddiqui, Q., Auer, D.P. Is sedation-induced BOLD fMRI low-frequency fluctuation increase mediated by increased motion? 2010, Magnetic Resonance Materials in Physics, Biology and Medicine, 23, 367-374

• Hlinka, J., Coombes, S. Depolarization Induced Suppression of Excitation and the Emergence of Ultraslow Rhythms in Neural Networks. 2010, Physical Review Letters, 104, 068101

• Dineen, R. A., Vilisaar, J., Hlinka, J., Bradshaw, C. M., Morgan, P. S., Constantinescu, C. S., and Auer, D. P. Disconnection as a mechanism for cognitive dysfunction in multiple sclerosis. 2009, Brain 132 (1):239-249.

• Fekete, L., Hlinka, J. Y., Kadlec, F., Kužel, P., Mounaix, P. Active optical control of the terahertz reflectivity of high-resistivity semiconductors. 2005, Optics Letters, 30 (15): 1992-1994 (Highlighted in: Mat. Res. Soc. Bulletin, vol. 30, p. 668 2005, highlight article by V. Ranjan).