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Mgr. Jan Vrána , Ph.D.

Position: 
research project leader

Phone: 
+420 585 238 720
Fax: 
+420 585 238 704
E-mail: 
vranaatueb [dot] cas [dot] cz

Address: 
Šlechtitelů 31 783 71 Olomouc - Holice
Room number: 
303

Education

  • B.Sc., University of Ostrava, Ostrava (1996), Biophysics and Chemical Physics
  • M.Sc., Palacky University, Olomouc (1998), Biophysics and Chemical Physics
  • Ph.D., Palacky University, Olomouc (2002), Biophysics

Appointments

2011 – present Scientist, Centre of Plant Structural and Functional Genomics, Institute of Experimental Botany, Olomouc, Czech Republic
2008 - 2011 Field Service Engineer – flow cytometers, I.T.A.-Intertact, s.r.o., Prague, Czech Republic
2002 – 2008 Flow Cytometry and Imaging Core Facility Manager, Institute for Stem Cell Research, University of Edinburgh, UK
2002 Posdoctoral Fellow, Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Olomouc, Czech Republic

Research interests

flow cytometry in plant research; chromosome analysis and sorting; nuclei analysis and sorting; cell cycle analysis

Scientific societies

Czech Society for Analytical Cytology (CSAC), member

All User Publications:
2015 (1) 2014 (13) 2013 (4) 2012 (2)
  • LTR retrotransposon dynamics in the evolution of the olive (Olea europaea) genome
    Barghini, E., Natali, L., Giordani, T., Cossu, R.M., Scalabrin, S., Cattonaro, F., Šimková, H., Vrána, J., Doležel, J., Morgante, M., Cavallini, A.
    DNA RESEARCH 22, 91-100, 2015 Fulltext: PDF link on intranet only
  • Flow cytometry in plant research: A success story
    Vrána, J., Cápal, P., Bednářová, M., Doležel, J.
    Fulltext: PDF link on intranet only
  • Advances in plant chromosome genomics
    Doležel, J., Vrána, J., Cápal, P., Kubaláková, M., Burešová, V., Šimková, H.
    BIOTECHNOLOGY ADVANCES 32, 122-136, 2014 Fulltext: PDF link on intranet only
  • SNP Discovery for mapping alien introgressions in wheat
    Tiwari, V.K., Wang, S., Sehgal, S., Vrána, J., Friebe, B., Kubaláková, M., Chhuneja, P., Doležel, J., Akhunov, E., Kalia, B., Sabir, J., Gill, B.S.
    BMC GENOMICS 15, 273, 2014 Fulltext: PDF link on intranet only
  • Flow cytometric chromosome sorting from diploid progenitors of bread wheat, T. urartu, Ae. speltoides and Ae. tauschii
    Molnár, I., Kubaláková, M., Šimková, H., Farkas, A., Cseh, A., Megyeri, M., Vrána, J., Molnár-Láng, M., Doležel, J.
    THEORETICAL AND APPLIED GENETICS 127, 1091-1104, 2014 Fulltext: PDF link on intranet only
  • A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome
    Mayer, K.F.X., Rogers, J., Doležel, J., Pozniak, C., Eversole, K., Feuillet, C., Gill, B., Friebe, B., Lukaszewski, A.J., Sourdille, P., Endo, T.R., Kubaláková, M., Číhalíková, J., Dubská, Z., Vrána, J., Šperková, R., Šimková, H., Febrer, M., Clissold, L., McLay, K., Singh, K., Chhuneja, P., Singh, N.K., Khurana, J., Akhunov, E., Choulet, F., Alberti, A., Barbe, V., Wincker, P., Kanamori, H., Kobayashi, F., Itoh, T., Matsumoto, T., Sakai, H., Tanaka, T., Wu, J.Z., Ogihara, Y., Handa, H., Maclachlan, P.R., Sharpe, A., Klassen, D., Edwards, D., Batley, J., Olsen, O.A., Sandve, S.R., Lien, S., Steuernagel, B., Wulff, B., Caccamo, M., Ayling, S., Ramirez-Gonzalez, R.H., Clavijo, B.J., Wright, J., Pfeifer, M., Spannagl, M., Martis, M.M., Mascher, M., Chapman, J., Poland, J.A., Scholz, U., Barry, K., Waugh, R., Rokhsar, D.S., Muehlbauer, G.J., Stein, N., Gundlach, H., Zytnicki, M., Jamilloux, V., Quesneville, H., Wicker, T., Faccioli, P., Colaiacovo, M., Stanca, A.M., Budak, H., Cattivelli, L., Glover, N., Pingault, L., Paux, E., Sharma, S., Appels, R., Bellgard, M., Chapman, B., Nussbaumer, T., Bader, K.C., Rimbert, H., Wang, S.C., Knox, R., Kilian, A., Alaux, M., Alfama, F., Couderc, L., Guilhot, N., Viseux, C., Loaec, M., Keller, B., Praud, S.
    SCIENCE 345(6194), 1251788, 2014 Fulltext: PDF link on intranet only
  • Common wheat chromosome 5B composition analysis using low-coverage 454 sequencing
    Sergeeva, E.M., Afonnikov, D.A., Koltunova, M.K., Gusev, V.D., Miroshnichenko, L.A., Vrána, J., Kubaláková, M., Poncet, C., Sourdille, P., Feuillet, C., Doležel, J., Salina, E.A.
    THE PLANT GENOME 7(2), 1-16, 2014 Fulltext: PDF link on intranet only
  • Proteomic analysis of barley cell nuclei purified by flow sorting
    Petrovská, B., Jeřábková, H., Chamrád, I., Vrána, J., Lenobel, R., Uřinovská, J., Sebela, M., Doležel, J.
    CYTOGENETIC AND GENOME RESEARCH 143, 78-86, 2014 Fulltext: PDF link on intranet only
  • A chromosomal genomics approach to assess and validate the desi and kabuli draft chickpea genome assemblies
    Ruperao, P., Chan, C.K., Azam, S., Karafiátová, M., Hayashi, S., Cížková, J., Saxena, R.K., Šimková, H., Song, C., Vrána, J., Chitikineni, A., Visendi, P., Gaur, P.M., Millán, T., Singh, K.B., Taran, B., Wang, J., Batley, J., Doležel, J., Varshney, R.K., Edwards, D.
    PLANT BIOTECHNOLOGY JOURNAL 12, 778-786, 2014 Fulltext: PDF link on intranet only
  • Identification of a novel retrotransposon with sex chromosome-specific distribution in Silene latifolia
    Kralova, T., Cegan, R., Kubat, Z., Vrána, J., Vyskot, B., Vogel, I., Kejnovsky, E., Hobza, R.
    CYTOGENETIC AND GENOME RESEARCH 143, 87-95, 2014 Fulltext: PDF link on intranet only
more lab. publications..