Centre of Plant Structural and Functional Genomics | of the Institute of Experimental Botany AS CR

Position:

deputy head

Phone:

+420 585 238 711

Fax:

+420 585 238 704

E-mail:

bartos

ueb [dot] cas [dot] cz

Address:

Šlechtitelů 31, 78371 Olomouc - Holice, Czech Republic

Room number:

204

Education

M.Sc., Palacky University, Olomouc (1999), Biophysics and Chemical Physics
Ph.D., Palacky University, Olomouc (2004), Biophysics (Ph.D. thesis: Analysis of plant nuclear genome using flow cytometry)

*Appointments*
2013 – present	Deputy Head, Centre of Structural and Functional Genomics, Institute of Experimental Botany, Olomouc, Czech Republic
2011 – 2012	Deputy Head, Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Olomouc, Czech Republic
2009 – 2011	Scientist, Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Olomouc, Czech Republic
2004 – 2008	Posdoctoral Fellow, Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Olomouc, Czech Republic

*Research interests*
2004 – present	flow cytometry and chromosome sorting, physical genome mapping
2007– present	genome structure analysis, seqeuncing, bioinformatics

*Synergistic activities*
2010 – present	Member of the Scientific Board of the Centre of the region Haná for the Biotechnological and Agricultural Research
2011 – present	Member of the Coordinating Committee of the International Wheat Genome Sequencing Consortium

*Academic honours and awards*
2009	Otto Wichterle Award (given by the Academy of Sciences of the Czech Republic)

All User Publications:

Number of publications: 50

Genetic mapping of DArT markers in the Festuca–Lolium complex and their use in freezing tolerance association analysis

Bartoš, J., Sandve, S.R., Kölliker, R. Kopecký, D., Christelová, P., Stočes, Š., Østrem, L., Larsen, A., Kilian, A., Rognli, O-A, Doležel, J.
THEORETICAL AND APPLIED GENETICS 122, 1133-1147, 2011 Fulltext: PDF link on intranet only
An improved consensus linkage map of barley based on flow-sorted chromosomes and single nucleotide polymorphism markers.

Muñoz-Amatriaín, M., Moscou, M.J., Bhat, P.R., Svensson, J.T., Bartoš, J., Suchánková, P., Šimková, H., Endo, T.R., Fenton, R.D., Lonardi, S., Castillo, A.M., Chao, S., Cistué, L., Cuesta-Marcos, A., Forrest, K.L., Hayden, M.J., Hayes, P.M., Horsley, R.D., Makoto, K., Moody, D., Sato, K., Vallés, M.P., Wulff, B.B.H., Muehlbauer, G.J., Doležel, J., Close, T.J.
THE PLANT GENOME 4 (3), 238-249, 2011 Fulltext: PDF link on intranet only

Development of chromosome-specific BAC resources for genomics of bread wheat

Šafář, J., Šimková, H., Kubaláková, M., Číhalíková, J., Suchánková, P., Bartoš, J., Doležel, J.
CYTOGENETIC AND GENOME RESEARCH 129, 211-223, 2010 Fulltext: PDF link on intranet only
Physical distribution of homoeologous recombination in individual chromosomes of Festuca pratensis in Lolium multiflorum

Kopecký, D., Havránková, M., Loureiro, J., Castro, S., Lukaszewski, A.J., Bartoš, J., Kopecká, J., Doležel, J.
CYTOGENETIC AND GENOME RESEARCH 129, 162-172, 2010 Fulltext: PDF link on intranet only
DArTFest – a platform for high-throughput genome profiling within the Festuca – Lolium complex

Kopecký, D., Bartoš, J., Lukaszewski, A.J., Baird, J.H., Černoch, V., Kölliker, R., Sandve, S.R., Rognli, O.A., Blois, H., Caig, V., Doležel, J., Kilian, A.
Fulltext: PDF link on intranet only

Chromosome genomics in the Triticeae

Doležel, J., Šimková, H., Kubaláková, M., Šafář, J., Suchánková, P., Číhalíková, J., Bartoš, J., Valárik, M.
Fulltext: PDF link on intranet only
Development and mapping of DArT markers within the Festuca - Lolium complex

Kopecký, D., Bartoš, J., Lukaszewski, A.J., Baird, J.H., Černoch, V., Kölliker, R., Rognli, O.A., Blois, H., Caig, V., Lübberstedt, T., Studer, B., Shaw, P., Doležel, J., Kilian, A.
BMC GENOMICS 10, 473, 2009 Fulltext: PDF link on intranet only
Generating resources for genomics of wheat homoeologous chromosome group 3: 3AS- and 3DS-specific BAC libraries

Šafář, J., Šimková, H., Kubaláková, M., Suchánková, P., Číhalíková, J., Bartoš, J., Fiocchetti, F., Roselli, M., Gill, B.S., Doležel, J., Lucretti, S.

A first survey of the rye (Secale cereale) genome composition through BAC end sequencing of the short arm of chromosome 1R

Bartoš, J., Paux, E., Kofler, R., Havránková, M., Kopecký, D., Suchánková, P., Šafář, J., Šimková, H., Town, C.D., Lelley, T., Feuillet, C., Doležel, J.
BMC PLANT BIOLOGY 8, , 2008 Fulltext: PDF link on intranet only
Development of microsatellite markers specific for the short arm of rye (Secale cereale L.) chromosome 1

Kofler, R., Bartoš, J., Gong, L., Stift, G., Suchánková, P., Šimková, H., Berenyi, M., Burg, K., Doležel, J., Lelley, T.
THEORETICAL AND APPLIED GENETICS 117, 915-926, 2008 Fulltext: PDF link on intranet only

Centre of Plant Structural and
Functional Genomics
of the Institute of Experimental Botany AS CR