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Biomatematika

Biomatematika Snímek embryonálního myšího srdce z optického tomografu, model kapilár složený z více konfokálních snímků potkaního mozku a snímek mozku bažanta pořízený magnetickou rezonancí.

Zabýváme se hlavně pořizováním a měřením 3D mikroskopických i makroskopických obrazů biologických objektů – buněčné ultrastruktury, buněk, tkání nebo pletiv, orgánů i celých organismů. Vyvíjíme nové metody hodnocení včetně počítačové implementace.

 

Hlavní směry našeho výzkumu jsou:

  • trojrozměrná analýza obrazu, stereologie, prostorová statistika, trojrozměrné rekonstrukce
  • stereologické metody 1. a 2. řádu: studium rozptylu metod, vývoj nových metod a softwaru, konzultace, školení
  • 3D mikroskopie biologických vzorků:
  1. konfokální a dvoufotonová mikroskopie: analýza dat, aplikace moderních fluorescenčních metod a metod dvoufotonové mikroskopie, kalibrační měření, dekonvoluce, obsluha a údržba dvoufotonového mikroskopu Leica SP AOBS a konfokálních mikroskopů Leica SPE, konzultace, školení
  2. optická projekční tomografie, fluorescenční a transmisní snímání submakroskopických vzorků, projasňování vzorků

Studujeme například anatomii ptačího mozku, převodní systémy srdce, kapiláry lidské placenty, potkaního svalu a mozku, vnitřní stavbu jehlic smrku a buněčné komponenty, např. jaderné struktury a endoplazmatické retikulum.

 

Laboratoř biochemie membránových receptorů

Aktuální projekty

Úspěchy

Publikace

Vyklický, Vojtěch - Krausová, Barbora - Černý, Jiří - Balík, Aleš - Zápotocký, Martin - Novotný, M. - Lichnerová, Katarina - Smejkalová, Tereza - Kaniaková, Martina - Kořínek, Miloslav - Petrovič, Miloš - Kačer, P. - Horák, Martin - Chodounská, Hana - Vyklický ml., Ladislav . Block of NMDA receptor channels by endogenous neurosteroids: implications for the agonist induced conformational states of the channel vestibule . Scientific Reports. 2015, Vol. 5, Jun 18, p. 10935 . IF = 5.578 [ASEP] [ doi ]
Roubalová, Lenka - Vošahlíková, Miroslava - Brejchová, Jana - Sýkora, Jan - Rudajev, Vladimír - Svoboda, Petr . High Efficacy but Low Potency of delta-Opioid Receptor-G Protein Coupling in Brij-58-Treated, Low-Density Plasma Membrane Fragments . PLoS ONE. 2015, Vol. 10, 8, e0135664 . IF = 3.234 [ASEP] [ doi ]
Lišková, Jana - Babchenko, Oleg - Varga, Marián - Kromka, Alexander - Hadraba, Daniel - Švindrych, Zdeněk - Burdíková, Zuzana - Bačáková, Lucie . Osteogenic cell differentiation on H-terminated and O-terminated nanocrystalline diamond films . International Journal of Nanomedicine. 2015, Vol. 10, 2015, p. 869-884 . IF = 4.383 [ASEP] [ doi ]
Kubínová, Lucie - Janáček, Jiří . Confocal stereology: an efficient tool for measurement of microscopic structures . Cell and Tissue Research. 2015, Vol. 360, 1, p. 13-28 . IF = 3.565 [ASEP] [ doi ]
Cvetko, E. - Čapek, Martin - Damjanovska, M. - Reina, M. A. - Eržen, I. - Stopar-Pintarič, T. The utility of three-dimensional optical projection tomography in nerve injection injury imaging . Anaesthesia. 2015, Vol. 70, 8, p. 939-947 . IF = 3.382 [ASEP] [ doi ]
Brejchová, Jana - Sýkora, Jan - Ostašov, Pavel - Merta, Ladislav - Roubalová, Lenka - Janáček, Jiří - Hof, Martin - Svoboda, Petr . TRH-receptor mobility and function in intact and cholesterol-depleted plasma membrane of HEK293 cells stably expressing TRH-R-eGFP . Biochimica Et Biophysica Acta-Biomembranes. 2015, Vol. 1848, 3, p. 781-796 . IF = 3.836 [ASEP] [ doi ]
Trojanová, Johana - Kulik, A. - Janáček, Jiří - Králíková, Michaela - Syka, Josef - Tureček, Rostislav . Distribution of glycine receptors on the surface of the mature calyx of Held nerve terminal . Frontiers in Neural Circuits 2014, roč. 8, oct, p. 120. ISSN 1662-5110. IF = 3.568 [ASEP] [ doi ]
Líšková, Silvia - Petrová, M. - Karen, Petr - Behuliak, Michal - Zicha, Josef . Contribution of Ca2+-Dependent Cl- Channels to Norepinephrine-Induced Contraction of Femoral Artery Is Replaced by Increasing EDCF Contribution during Ageing . BioMed Research International 2014, roč. 2014, 2014, p. 289361. ISSN 2314-6133. IF = 1.579 [ASEP] [ doi ]
Kubínová, Z. - Janáček, Jiří - Lhotáková, Z. - Kubínová, Lucie - Albrechtová, J. Unbiased estimation of chloroplast number in mesophyll cells: advantage of a genuine three-dimensional approach . Journal of Experimental Botany 2014, roč. 65, 2, p. 609-620. ISSN 0022-0957. IF = 5.526 [ASEP] [ doi ]
Janáček, Jiří - Čapek, Martin - Michálek, Jan - Karen, Petr - Kubínová, Lucie . 3D microscopic imaging and evaluation of tubular tissue architecture . Physiological Research 2014, roč. 63, suppl.1, s49-s55. ISSN 0862-8408. IF = 1.293 [ASEP]
Vaněčková, Ivana - Vokurková, Martina - Rauchová, Hana - Dobešová, Zdenka - Pecháňová, O. - Kuneš, Jaroslav - Vorlíček, Jaroslav - Zicha, Josef . Chronic antioxidant therapy lowers blood pressure in adult but not in young Dahl salt hypertensive rats: the role of sympathetic nervous system . Acta Physiologica, 2013, Vol. 208, 4, p. 340-349 . IF = 4.382 [ASEP] [ doi ]
Michálek, Jan - Čapek, Martin . A Piecewise Monotone Subgradient Algorithm for Accurate L1 -TV Based Registration of Physical Slices With Discontinuities in Microscopy . IEEE Transactions on Medical Imaging, 2013, Vol. 32, 5, p. 901-918 . IF = 4.027 [ASEP] [ doi ]
Kubínová, Lucie - Mao, X. W. - Janáček, Jiří . Blood Capillary Length Estimation from Three-Dimensional Microscopic Data by Image Analysis and Stereology . Microscopy and Microanalysis, 2013, Vol. 19, 4, p. 898-906 . IF = 2.495 [ASEP] [ doi ]
Cvetko, E. - Janáček, Jiří - Kubínová, Lucie - Eržen, I. The capillary pattern in human masseter muscle during ageing . Image Analysis and Stereology, 2013, Vol. 32, 3, p. 135-144 . IF = 0.639 [ASEP] [ doi ]
Behuliak, Michal - Pintérová, Mária - Bencze, Michal - Petrová, M. - Líšková, Silvia - Karen, Petr - Kuneš, Jaroslav - Vaněčková, Ivana - Zicha, Josef . Ca2+ sensitization and Ca2+ entry in the control of blood pressure and adrenergic vasoconstriction in conscious Wistar-Kyoto and spontaneously hypertensive rats . Journal of Hypertension, 2013, Vol. 31, 10, p. 2025-2035 . IF = 3.806 [ASEP] [ doi ]
Šepitka, J. - Lukeš, J. - Staněk, L. - Filová, Eva - Burdíková, Zuzana - Řezníček, J. Nanoindentation of intervertebral disc tissues localised by SHG imaging . Computer methods in biomechanics and biomedical engineering, 2012, Vol. 15, Suppl.1, p. 335-336 . IF = 1.393 [ASEP] [ doi ]
Vohník, Martin - Burdíková, Zuzana - Wilkinson, D. M. Testate Amoebae Communities in the Rhizosphere of Rhododendron ponticum (Ericaceae) in an Evergreen Broadleaf Forest in Southern Spain . Acta Protozoologica, 2012, Vol. 51, Sp. iss.3, p. 259-269 . IF = 0.984 [ASEP] [ doi ]
Skalský, I. - Szárszoi, O. - Filová, Elena - Pařízek, Martin - Lytvynets, Andriy - Malušková, J. - Lodererová, A. - Brynda, Eduard - Lisá, Věra - Burdíková, Zuzana - Čapek, Martin - Pirk, J. - Bačáková, Lucie . A perivascular system releasing sirolimus prevented intimal hyperplasia in a rabbit model in a medium-term study . International Journal of Pharmaceutics, 2012, Vol. 427, 2, p. 311-319 . IF = 3.458 [ASEP] [ doi ]
Lhotáková, Z. - Urban, Otmar - Dubánková, M. - Cvikrová, Milena - Tomášková, Ivana - Kubínová, Lucie - Zvára, K. - Marek, Michal V. - Albrechtová, J. The impact of long-term CO2 enrichment on sun and shade needles of Norway spruce (Picea abies): Photosynthetic performance, needle anatomy and phenolics accumulation . Plant Science, 2012, 188-189, JUN, p. 60-70 . IF = 2.922 [ASEP] [ doi ]
Jirkovská, M. - Kučera, T. - Kaláb, J. - Jadrníček, M. - Niedobová, V. - Janáček, Jiří - Kubínová, Lucie - Moravcová, M. - Žižka, Z. - Krejčí, V. The branching pattern of villous capillaries and structural changes of placental terminal villi in type 1 diabetes mellitus . Placenta, 2012, Vol. 33, 5, p. 343-351 . IF = 3.117 [ASEP] [ doi ]
Janáček, Jiří - Kreft, M. - Čebašek, V. - Eržen, I. Correcting the axial shrinkage of skeletal muscle thick sections visualized by confocal microscopy . Journal of Microscopy, 2012, Vol. 246, 2, p. 107-112 . IF = 1.633 [ASEP] [ doi ]
Hudcovic, Tomáš - Kolínská, Jiřina - Klepetář, Jan - Štěpánková, Renata - Řezanka, Tomáš - Šrůtková, Dagmar - Schwarzer, Martin - Erban, V. - Du, Zhengyu - Wells, J. M. - Hrnčíř, Tomáš - Tlaskalová-Hogenová, Helena - Kozáková, Hana . Protective effect of Clostridium tyrobutyricum in acute dextran sodium sulphate-induced colitis: differential regulation of tumour necrosis factor-α and interleukin-18 in BALB/c and severe combined immunodeficiency mice . Clinical and Experimental Immunology, 2012, Vol. 167, 2, p. 356-365 . IF = 3.409 [ASEP] [ doi ]
Cvetko, E. - Karen, Petr - Eržen, I. Wearing of complete dentures reduces slow fibre and enhances hybrid fibre fraction in masseter muscle . Journal of Oral Rehabilitation, 2012, Vol. 39, 8, p. 608-614 . IF = 2.344 [ASEP] [ doi ]
Cvetko, E. - Karen, Petr - Eržen, I. Myosin heavy chain composition of the human sternocleidomastoid muscle . Annals of Anatomy-Anatomischer Anzeiger, 2012, Vol. 194, 5, p. 467-472 . IF = 1.960 [ASEP] [ doi ]
Cvetko, E. - Karen, Petr - Janáček, Jiří - Kubínová, Lucie - Plasencia, A.L. - Eržen, I. Human Masseter Muscle Fibers From the Elderly Express Less Neonatal Myosin Than Those of Young Adults . Anatomical Record-Advances in Integrative Anatomy and Evolutionary Biology, 2012, Vol. 295, 8, p. 1364-1372 . IF = 1.343 [ASEP] [ doi ]
Burdíková, Zuzana - Čapek, Martin - Švindrych, Zdeněk - Gryndler, M. - Kubínová, Lucie - Holcová, K. Ecology of Testate Amoebae in the Komořany Ponds in the Vltava Basin . Microbial Ecology, 2012, Vol. 64, 1, p. 117-130 . IF = 3.277 [ASEP] [ doi ]
Váchová, Libuše - Šťovíček, V. - Hlaváček, Otakar - Chernyavskiy, Oleksandr - Štěpánek, L. - Kubínová, Lucie - Palková, Z. Flo11p, drug efflux pumps, and the extracellular matrix cooperate to form biofilm yeast colonies . Journal of Cell Biology, 2011, Vol. 194, 5, p. 679-687 . IF = 10.264 [ASEP] [ doi ]
Vohník, Martin - Burdíková, Zuzana - Vyhnal, Aleš - Koukol, O. Interactions Between Testate Amoebae and Saprotrophic Microfungi in a Scots Pine Litter Microcosm . Microbial Ecology, 2011, Vol. 61, 3, p. 660-668 . IF = 2.912 [ASEP] [ doi ]
Skalský, I. - Filová, Elena - Szárszoi, O. - Pařízek, Martin - Lytvynets, Andriy - Malušková, J. - Lodererová, A. - Brynda, Eduard - Lisá, Věra - Burdíková, Zuzana - Čapek, Martin - Pirk, J. - Bačáková, Lucie . A periadventitial sirolimus-releasing mesh decreased intimal hyperplasia in a rabbit model . Physiological Research, 2011, Vol. 60, 3, p. 585-588 . IF = 1.555 [ASEP]
Philimonenko, Anatoly - Janáček, Jiří - Snyers, L. - Almeder, M. - Berger, W. - Schmidt, W. - Schofer, C. - Hozák, Pavel . Chromosomal dynamics of cell cycle regulator gene p21 during transcriptional activation . Journal of Structural Biology, 2011, Vol. 173, 2, p. 382-390 . IF = 3.406 [ASEP] [ doi ]
Michálek, Jan - Čapek, Martin - Kubínová, Lucie . Nonrigid Registration of CLSM Images of Physical Sections with Discontinuous Deformations . Microscopy and Microanalysis, 2011, Vol. 17, 6, p. 923-936 . IF = 3.007 [ASEP] [ doi ]
Michálek, Jan - Čapek, Martin - Kubínová, Lucie . Compensation of inhomogeneous fluorescence signal distribution in 2D images acquired by confocal microscopy . Microscopy Research Technique, 2011, Vol. 74, 9, p. 831-838 . IF = 1.792 [ASEP] [ doi ]
Líšková, Silvia - Petrová, M. - Karen, Petr - Kuneš, Jaroslav - Zicha, Josef . Effects of aging and hypertension on the participation of endothelium-derived constricting factor (EDCF) in norepinephrine-induced contraction of rat femoral artery . European Journal of Pharmacology, 2011, Vol. 667, 1-3, p. 265-270 . IF = 2.516 [ASEP] [ doi ]
Kozina, V. - Geist, D. - Kubínová, Lucie - Bilic, E. - Karnthaler, H. P. - Waitz, T. - Janáček, Jiří - Chernyavskiy, Oleksandr - Krhen, I. - Ježek, D. Visualization of Reinke’s crystals in normal and cryptorchid testis . Histochemistry and Cell Biology, 2011, Vol. 135, 2, p. 215-228 . IF = 2.588 [ASEP] [ doi ]
Kozina, V. - Banek, L. - Kneževič, N. - Geist, D. - Kubínová, Lucie - Kosovič, M. - Rentenberger, Ch. - Vukasovič, A. - Ježek, D. Reinke´s Crystals in Perivascular and Peritubular Leydig Cells . Croatica Chemica Acta, 2011, Vol. 84, 2, p. 159-167 . IF = 0.763 [ASEP] [ doi ]
Kochová, P. - Cimrman, R. - Janáček, Jiří - Witter, K. - Tonar, Z. How to asses, visualize and compare the anisotropy of linear structures reconstructed from optical sections ? A study based on histopathological quantification of human brain microvessels . Journal of Theoretical Biology, 2011, Vol. 286, -, p. 67-78 . IF = 2.208 [ASEP] [ doi ]
Janáček, Jiří - Cvetko, E. - Kubínová, Lucie - Travnik, L. - Eržen, I. A novel method for evaluation of capillarity in human skeletal muscles from confocal 3D images . Microvascular Research, 2011, Vol. 81, 2, p. 231-238 . IF = 2.828 [ASEP] [ doi ]
Hájková, Zuzana - Bugajev, Viktor - Dráberová, Eduarda - Vinopal, Stanislav - Dráberová, Lubica - Janáček, Jiří - Dráber, Petr - Dráber, Pavel . STIM1-Directed Reorganization of Microtubules in Activated Mast Cells . Journal of Immunology, 2011, Vol. 186, 2, p. 913-923 . IF = 5.788 [ASEP]
Grausová, Ľubica - Kromka, Alexander - Burdíková, Zuzana - Eckhardt, Adam - Rezek, Bohuslav - Vacík, Jiří - Haenen, K. - Lisá, Věra - Bačáková, Lucie . Enhanced Growth and Osteogenic Differentiation of Human Osteoblast-Like Cells on Boron-Doped Nanocrystalline Diamond Thin Films . PLoS ONE, 2011, Vol. 6, 6, e20943 . IF = 4.092 [ASEP] [ doi ]
Eržen, I. - Janáček, Jiří - Kubínová, Lucie . Characterization of the capillary network in skeletal muscles from 3D data . Physiological Research, 2011, Vol. 60, 1, p. 1-13 . IF = 1.555 [ASEP]
Dráberová, Eduarda - Vinopal, Stanislav - Morfini, G. - Liu, P. S. - Sládková, Vladimíra - Sulimenko, Tetyana - Burns, M.R. - Solowska, J. - Kulandaivel, K. - De Chadarévian, J.P. - Legido, A. - Mork, S.J. - Janáček, Jiří - Baas, P. - Dráber, Pavel - Kats . Microtubule-severing ATPase spastin in glioblastoma: increased expression in human glioblastoma cell lines and inverse roles in cell motility and proliferation . Journal of Neuropathology and Experimental Neurology, 2011, Vol. 70, 9, p. 811-826 . IF = 4.258 [ASEP] [ doi ]
Čebašek, V. - Eržen, I. - Vyhnal, Aleš - Janáček, Jiří - Ribarič, S. - Kubínová, Lucie . The estimation error of skeletal muscle capillary supply is significantly reduced by 3D Metod . Microvascular Research, 2010, Vol. 79, 1, p. 40-46 . IF = 2.390 [ASEP] [ doi ]
Pintérová, Mária - Karen, Petr - Kuneš, Jaroslav - Zicha, Josef . Role of nifedipine-sensitive sympathetic vasoconstriction in maintenance of high blood pressure in spontaneously hypertensive rats: effect of Gi-protein inactivation by pertussis toxin . Journal of Hypertension, 2010, Vol. 28, 5, p. 969-978 . IF = 3.980 [ASEP] [ doi ]
Philimonenko, Vlada - Janáček, Jiří - Harata, M. - Hozák, Pavel . Transcription-dependent rearrangements of actin and nuclear myosin I in the nucleolus . Histochemistry and Cell Biology, 2010, Vol. 134, 3, p. 243-249 . IF = 4.727 [ASEP] [ doi ]
Michálek, Jan - Čapek, M. - Mao, X. W. - Kubínová, Lucie . Lateral Brightness Correction in Confocal Microscopy Images Using Mathematical Morphology Filters . Microscopy and Microanalysis, 2010, Vol. 16, Suppl.2, p. 758-759 . IF = 2.179 [ASEP] [ doi ]
Michálek, Jan - Čapek, M. - Janáček, Jiří - Kubínová, Lucie . Elastic Alignment of Microscopic Images Using Parallel Processing on CUDA-Supported Graphics Processor Units . Microscopy and Microanalysis, 2010, Vol. 16, Suppl.2, p. 730-731 . IF = 2.179 [ASEP] [ doi ]
Mao, X. W. - Favre, C. J. - Fike, J. R. - Kubínová, Lucie - Anderson, E. - Campbell-Beachler, M. - Jones, T. - Smith, A. - Rightnar, S. - Nelson, G. A. High-LET Radiation-Induced Response of Microvessels in the Hippocampus . Radiation Research, 2010, Vol. 173, 4, p. 486-493 . IF = 2.578 [ASEP] [ doi ]
Kubínová, Lucie - Janáček, Jiří - Eržen, I. - Mao, X. W. Measurement of capillary lenght from 3D images acquired by confocal microscopy using image analysis and stereology . Microscopy and Microanalysis, 2010, Vol. 16, Suppl.2, p. 736-737 . IF = 2.179 [ASEP] [ doi ]
Filová, Eva - Burdíková, Zuzana - Rampichová, Michala - Bianchini, P. - Čapek, Martin - Košťáková, E. - Amler, Evžen - Kubínová, Lucie . Analysis and three-dimensional visualization of collagen in artificial scaffolds using nonlinear microscopy techniques . Journal of Biomedical Optics, 2010, Vol. 15, 6, 066011-1-066011-7 . IF = 3.188 [ASEP] [ doi ]
Burdíková, Zuzana - Čapek, Martin - Ostašov, Pavel - Machač, Jiří - Pelc, Radek - Mitchell, E.A.D. - Kubínová, Lucie . Testate Amoebae Examined by Confocal and Two-Photon Microscopy: Implications for Taxonomy and Ecophysiology . Microscopy and Microanalysis, 2010, Vol. 16, 6, p. 735-746 . IF = 2.179 [ASEP] [ doi ]
Burdíková, Zuzana - Čapek, Martin - Ostašov, Pavel - Mitchell, E.A.D. - Machač, Jiří - Kubínová, Lucie . Confocal Laser Scanning Microscopy and Two Photon Excitation Microscopy as Tools to Study Testate Amoebae . Microscopy and Microanalysis, 2010, Vol. 16, Suppl.2, p. 1142-1143 . IF = 2.179 [ASEP] [ doi ]
Čapek, Martin - Brůža, Petr - Janáček, Jiří - Karen, Petr - Kubínová, Lucie - Vagnerová, R. Volume reconstruction of large tissue specimens from serial physical sections using confocal microscopy and correction of cutting deformations by elastic registration . Microscopy Research Technique, 2009, Vol. 72, 2, p. 110-119 . IF = 1.850 [ASEP] [ doi ]
Váchová, Libuše - Chernyavskiy, Oleksandr - Strachotová, Dita - Bianchini, P. - Burdíková, Zuzana - Ferčíková, I. - Kubínová, Lucie - Palková, Z. Architecture of developing multicellular yeast colony: spatio-temporal expression of Ato1p ammonium exporter . Environmental Microbiology, 2009, Vol. 11, 7, p. 1866-1877 . IF = 4.909 [ASEP] [ doi ]
Vohník, Martin - Burdíková, Zuzana - Albrechtová, Jana - Vosátka, Miroslav . Testate Amoebae (Arcellinida & Euglyphida) vs. Ericoid Mycorrhizal and DSE Fungi: A Possible Novel Interaction in The Mycorrhizosphere of Ericaceous Plants? . Microbial Ecology, 2009, Vol. 57, 1, p. 203-214 . IF = 3.251 [ASEP] [ doi ]
Tonar, Z. - Janáček, Jiří - Nedorost, L. - Grill, R. - Báča, V. - Záťura, F. Analysis of microcracks caused by drop shatter testing of porcine kidneys . Annals of Anatomy-Anatomischer Anzeiger, 2009, Vol. 191, 3, p. 294-308 . IF = 0.877 [ASEP] [ doi ]
Radochová, Barbora - Tichá, I. Leaf anatomy during leaf development of photoautotrophically in vitro -grown tobacco plants as affected by growth irradiance . Biologia Plantarum, 2009, Vol. 53, 1, p. 21-27 . IF = 1.656 [ASEP] [ doi ]
Pelc, Radek - Ishii, N. - Ashley, C. C. Laser flash photolysis of diazo-2, a caged calcium chelator: The relationship between the extent and rate of smooth muscle relaxation . Journal of Laser Applications, 2009, Vol. 21, 1, p. 32-38 . IF = 0.652 [ASEP] [ doi ]
Kundrát, M. - Janáček, Jiří - Russell, A. P. Developmental patterns of the crocodilian and avian columella auris: reappraisal of interpretations of the derivation of the dorsal hyoid arch in archosaurian tetrapods . Zoological Journal of the Linnean Society, 2009, Vol. 156, 2, p. 384-410 . IF = 2.031 [ASEP] [ doi ]
Kundrát, M. - Janáček, Jiří - Martin, S. Development of transient head cavities during early organogenesis of the Nile Crocodile (Crocodylus niloticus) . Journal of Morphology, 2009, Vol. 270, 9, p. 1069-1083 . IF = 1.706 [ASEP] [ doi ]
Karen, Petr - Števanec, M. - Smerdu, V. - Cvetko, E. - Kubínová, Lucie - Eržen, I. Software for muscle fibre type classification and analysis . European Journal of Histochemistry, 2009, Vol. 53, 2, p. 87-95 . IF = 0.886 [ASEP]
Johnson, M.D. - He, L. - Herman, D. - Wakimoto, H. - Wallace, C. A. - Zídek, Václav - Mlejnek, Petr - Musilová, Alena - Šimáková, Miroslava - Vorlíček, Jaroslav - Křen, Vladimír - Vyklický, O. - Qi, N.R. - Wang, J. - Seidman, Ch. E. - Seidman, J. - Kurtz, . Dissection of Chromosome 18 Blood Pressure and Salt-Sensitivity Quantitative Trait Loci in the Spontaneously Hypertensive Rat . Hypertension, 2009, Vol. 54, 3, p. 639-645 . IF = 6.614 [ASEP] [ doi ]
Janáček, Jiří - Čebašek, V. - Kubínová, Lucie - Ribarič, S. - Eržen, I. 3D Visualization and Measurement of Capillaries Supplying Metabolically Different Fiber Types in the Rat Extensor Digitorum Longus Muscle During Denervation and Reinnervation . Journal of Histochemistry and Cytochemistry, 2009, Vol. 57, 5, p. 437-447 . IF = 2.372 [ASEP] [ doi ]
Griffiths, P. J. - Isackson, H. - Pelc, Radek - Redwood, C.S. - Funari, S.S. - Watkins, H. - Ashley, C. C. Synchronous In Situ ATPase Activity, Mechanics, and Ca2+ Sensitivity of Human and Porcine Myocardium . Biophysical Journal, 2009, Vol. 97, 9, p. 2503-2512 . IF = 4.390 [ASEP] [ doi ]
Chernyavskiy, Oleksandr - Vannucci, Luca - Bianchini, Paolo - Difato, Francesco - Saieh, M. - Kubínová, Lucie . Imaging of mouse experimental melanoma in vivo and ex vivo by combination of confocal and nonlinear microscopy . Microscopy Research Technique, 2009, Vol. 72, 6, p. 411-423 . IF = 1.850 [ASEP]
Radochová, Barbora - Tichá, I. Excess irradiance causes early symptoms of senescence during leaf expansion in photoautotrophically in vitro grown tobacco plants . Photosynthetica, 2008, Vol. 46, 3, p. 471-475 . IF = 1.000 [ASEP]
Pelc, Radek - Hostounský, Z. - Otaki, T. Correlation between off-axis illumination and apodized phase-contrast: two complementary microscopic phase-imaging modes . Journal of Biomedical Optics, 2008, Vol. 13, 5, , 054067-1-054067-12 . IF = 2.970 [ASEP] [ doi ]
Lhotáková, Zuzana - Albrechtová, Jana - Janáček, Jiří - Kubínová, Lucie . Advantages and pitfalls of using free-hand sections of frozen needles for three-dimensional analysis of mesophyll by stereology and confocal microscopy . Journal of Microscopy, 2008, Vol. 232, 1, p. 56-63 . IF = 1.409 [ASEP]
Kuneš, Jaroslav - Dobešová, Zdenka - Musilová, Alena - Zídek, Václav - Vorlíček, Jaroslav - Pravenec, Michal - Křen, Vladimír - Zicha, Josef . Hemodynamic Characterization of Recombinant Inbred Strains: Twenty Years Later . Hypertension Research, 2008, Vol. 31, 8, p. 1659-1668 . IF = 3.146 [ASEP]
Jirkovská, M. - Janáček, Jiří - Kaláb, Josef - Kubínová, Lucie . Three-dimensional Arrangement of the Capillary Bed and Its Relationship to Microrheology in the Terminal Villi of Normal Term Placenta . Placenta, 2008, Vol. 29, 10, p. 892-897 . IF = 2.775 [ASEP] [ doi ]
Janáček, Jiří . Asymptotics of variance of the lattice point count . Czechoslovak Mathematical Journal, 2008, Vol. 58, 3, p. 751-758 . IF = 0.210 [ASEP] [ doi ]
Kovanda, J. - Hák, T. - Janáček, Jiří . Economy-wide material flow indicators in the Czech Republic: trends, decoupling analysis and uncertainties . International Journal of Environment and Pollution, 2008, Vol. 35, 1, p. 25-41 . IF = 0.568 [ASEP]
Čebašek, V. - Kubínová, Lucie - Janáček, Jiří - Ribarič, S. - Eržen, I. Adaptation of muscle fibre types and capillary network to acute denervation and shortlasting reinnervation . Cell and Tissue Research, 2007, Vol. 330, 2, p. 279-289 . IF = 2.613 [ASEP]
Tonar, Z. - Kochová, P. - Holeček, M. - Janáček, Jiří . Stereological assessment, mechanical measurement and computer modelling of smooth muscle . Materials Science Forum, 2007, 567-568, -, p. 353-356 . IF = 0.399 [ASEP]
Kundrát, M. - Janáček, Jiří . Cranial pneumatization and auditory perceptions of the oviraptorid dinosaur Conchoraptor gracilis (Theropoda, Maniraptora) from the Late Cretaceous of Mongolia . Naturwissenschaften, 2007, Vol. 94, 9, p. 769-778 . IF = 1.955 [ASEP]
Kubínová, Lucie - Kutík, J. Surface density and volume density measurements of chloroplast thylakoids in maize ( Zea mays L.) under chilling conditions . Photosynthetica, 2007, Vol. 45, 4, p. 481-488 . IF = 0.976 [ASEP]
Handl, M. - Filová, Eva - Kubala, M. - Lánský, Z. - Koláčná, Lucie - Vorlíček, Jaroslav - Trč, T. - Amler, Evžen . Fluorescent advanced glycation end products in the detection of factual stages of cartilage degeneration . Physiological Research, 2007, Vol. 56, 2, p. 235-242 . IF = 1.505 [ASEP]
Albrechtová, Jana - Janáček, Jiří - Lhotáková, Zuzana - Radochová, Barbora - Kubínová, Lucie . Novel efficient methods for measuring mesophyll anatomical characteristics from fresh thick sections using stereology and confocal microscopy: application on acid rain-treated Norway spruce needles . Journal of Experimental Botany, 2007, Vol. 58, 6, p. 1451-1461 . IF = 3.917 [ASEP]

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Kontakty

Fyziologický ústav AV ČR, v.v.i.
Oddělení biomatematiky

Vídeňská 1083
14220 Praha 4
tel. +420 241 062 768
 

jiri.janacek@fgu.cas.cz

Lidé

  RNDr. Jiří Janáček, Ph.D.
vedoucí oddělení
  RNDr. Lucie Kubínová, CSc.
zástupce vedoucího
  Ing. Martin Čapek, Ph.D.
vědecký pracovník
  RNDr. Radek Pelc, DPhil.
vědecký pracovník
  RNDr. Barbora Radochová, Ph.D.
vědecký pracovník
  Mgr. Zuzana Burdíková, Ph.D.
postdoktorand
  Alexandr Čerňavský, Ph.D.
postdoktorand
  Mgr. Daniel Hadraba
postgraduální student
  MUDr. Petr Karen, CSc.
vědecký pracovník
  Ing. Kateřina Špačková
projektový manažer
  Alena Dědičová
technický pracovník
 

 

Laboratoř biochemie membránových receptorů

  Doc. RNDr. Petr Svoboda, DrSc.
vědecký pracovník
  RNDr. Lenka Roubalová, Ph.D.
vědecký pracovník
  RNDr. Hana Ujčíková, Ph.D.
vědecký pracovník
  Ing. Miroslava Vošahlíková, Ph.D.
vědecký pracovník
  Mgr. Jana Brejchová, Ph.D.
vědecký pracovník
  Ing. Kateřina Stolařová
postgraduální student
  Bc. Kristina Cechová
pregraduální student
   
   
   
   

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