Centre of Plant Structural and Functional Genomics | of the Institute of Experimental Botany AS CR

Position:

deputy head

Phone:

+420 585 238 711

Fax:

+420 585 238 704

E-mail:

bartos

ueb [dot] cas [dot] cz

Address:

Šlechtitelů 31, 78371 Olomouc - Holice, Czech Republic

Room number:

204

Education

M.Sc., Palacky University, Olomouc (1999), Biophysics and Chemical Physics
Ph.D., Palacky University, Olomouc (2004), Biophysics (Ph.D. thesis: Analysis of plant nuclear genome using flow cytometry)

*Appointments*
2013 – present	Deputy Head, Centre of Structural and Functional Genomics, Institute of Experimental Botany, Olomouc, Czech Republic
2011 – 2012	Deputy Head, Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Olomouc, Czech Republic
2009 – 2011	Scientist, Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Olomouc, Czech Republic
2004 – 2008	Posdoctoral Fellow, Laboratory of Molecular Cytogenetics and Cytometry, Institute of Experimental Botany, Olomouc, Czech Republic

*Research interests*
2004 – present	flow cytometry and chromosome sorting, physical genome mapping
2007– present	genome structure analysis, seqeuncing, bioinformatics

*Synergistic activities*
2010 – present	Member of the Scientific Board of the Centre of the region Haná for the Biotechnological and Agricultural Research
2011 – present	Member of the Coordinating Committee of the International Wheat Genome Sequencing Consortium

*Academic honours and awards*
2009	Otto Wichterle Award (given by the Academy of Sciences of the Czech Republic)

All User Publications:

Number of publications: 52

A first survey of the rye (Secale cereale) genome composition through BAC end sequencing of the short arm of chromosome 1R

Bartoš, J., Paux, E., Kofler, R., Havránková, M., Kopecký, D., Suchánková, P., Šafář, J., Šimková, H., Town, C.D., Lelley, T., Feuillet, C., Doležel, J.
BMC PLANT BIOLOGY 8, , 2008 Fulltext: PDF link on intranet only
Development of microsatellite markers specific for the short arm of rye (Secale cereale L.) chromosome 1

Kofler, R., Bartoš, J., Gong, L., Stift, G., Suchánková, P., Šimková, H., Berenyi, M., Burg, K., Doležel, J., Lelley, T.
THEORETICAL AND APPLIED GENETICS 117, 915-926, 2008 Fulltext: PDF link on intranet only
A novel resource for genomics of Triticeae: BAC library specific for the short arm of rye (Secale cereale L.) chromosome 1R (1RS).

Šimková, H., Šafář, J., Suchánková, P., Kovářová, P., Bartoš, J., Kubaláková, M., Janda, J., Číhalíková, J., Mago, R., Lelley, T., Doležel, J.
BMC GENOMICS 9, 23, 2008 Fulltext: PDF link on intranet only
Coupling amplified DNA from flow-sorted chromosomes to high-density SNP mapping in barley

Šimková, H., Svensson, J.T., Condamine, P., Hřibová, E., Suchánková, P., Bhat, P.R., Bartoš, J., Šafář, J., Close, T.J., Doležel, J.
BMC GENOMICS 9, , 2008 Fulltext: PDF link on intranet only

Production of microgram amounts of DNA from flow-sorted plant chromosomes

Suchánková, Pavla; Šimková, Hana; Svensson, J.T.; Hřibová, Eva; Condamine, P.; Bhat, P.R.; Bartoš, Jan; Šafář, Jan; Close, T.J.; Doležel, Jaroslav
CHROMOSOME RESEARCH 15 [2], 4-5, 2007
Chromosome analysis and sorting

Doležel, J., Kubaláková,M., Suchánková, P., Kovářová, P., Bartoš, J., Šimková, H.
Chromosome-based genomics in cereals

Dolezel, J., Kubalakova, M., Paux, E., Bartos, J., Feuillet, C.
CHROMOSOME RESEARCH 15 [1], 51-66, 2007 Fulltext: PDF link on intranet only

MK17, a specific marker closely linked to the gynoecium suppression region on the Y chromosome in Silene latifolia

Hobza, R., Hrušáková, P., Šafář, J., Bartoš, J., Janoušek, B., Žlůvová, J., Michu, E., Doležel, J., Vyskot, B.
THEORETICAL AND APPLIED GENETICS 113 [2], 280-287, 2006
Dissection of the nuclear genome of barley by chromosome flow sorting

Suchánková, P., Kubaláková, M., Kovářová, P., Bartoš, J., Číhalíková, J., Molnár-Láng, M., Endo, T. R., Doležel, J.
THEORETICAL AND APPLIED GENETICS 113, 651-659, 2006
Advanced resources for plant genomics: BAC library specific for the short arm of wheat chromosome 1B

Janda, J., Šafář, J., Kubaláková, M., Bartoš, J., Kovářová, P., Suchánková, P., Pateyron, S., Číhalíková, J., Sourdille, P., Šimková, H., Faivre-Rampant, P., Hřibová, E., Bernard, M., Lukaszewski, A., Doležel, J., Chalhoub, B.
PLANT JOURNAL 47, 977-986, 2006

Centre of Plant Structural and
Functional Genomics
of the Institute of Experimental Botany AS CR