Co-work publications

2016

• Fajkus, P., Peška, V., Sitová, Z., Fulnečková, J., Dvořáčková, M., Gogela, R., Sýkorová, E., Hapala, J., Fajkus, J. (2016), Allium telomeres unmasked: the unusual telomeric sequence (CTCGGTTATGGG)n is synthesized by telomerase., PLANT JOURNAL [AIS=0, IF=0]

2015

• Ohnmacht, SA., Marchetti, C., Gunaratnam, M., Besser, RJ., Haider, SM., Di Vita, G., Lowe, HL., Mellinas-Gomez, M., Diocou, S., Robson, M., Sponer, J., Islam, B., Pedley, RB., Hartley, JA., Neidle, S. (2015), A G-quadruplex-binding compound showing anti-tumour activity in an in vivo model for pancreatic cancer, SCIENTIFIC REPORTS 5 [AIS=, IF=]
• Hnyluchova, Z., Bjaloncikova, P., Karas, P., Mravec, F., Halasova, T., Pekar, M., Kubala, L., Vitecek, J. (2015), A simple microviscometric approach based on Brownian motion tracking, REVIEW OF SCIENTIFIC INSTRUMENTS 86 [AIS=, IF=]
• Muenzner, JK., Rehm, T., Biersack, B., Casini, A., de Graaf, IAM., Worawutputtapong, P., Noor, A., Kempe, R., Brabec, V., Kasparkova, J., Schobert, R. (2015), Adjusting the DNA Interaction and Anticancer Activity of Pt(II) N-Heterocyclic Carbene Complexes by Steric Shielding of the Trans Leaving Group, JOURNAL OF MEDICINAL CHEMISTRY 58, 6283-6292 [AIS=, IF=]
• Stefkova, K., Prochazkova, J., Pachernik, J. (2015), Alkaline Phosphatase in Stem Cells, STEM CELLS INTERNATIONAL [AIS=, IF=]
• Goodson, WH., Lowe, L., Carpenter, DO., Gilbertson, M., Ali, AM., Salsamendi, ALD., Lasfar, A., Carnero, A., Azqueta, A., Amedei, A., Charles, AK., Collins, AR., Ward, A., Salzberg, AC., Colacci, A., Olsen, AK., Berg, A., Barclay, BJ., Zhou, BHP., Blanco-Aparicio, C., Baglole, CJ., Dong, CF., Mondello, C., Hsu, CW., Naus, CC., Yedjou, C., Curran, CS., Laird, DW., Koch, DC., Carlin, DJ., Felsher, DW., Roy, D., Brown, DG., Ratovitski, E., Ryan, EP., Corsini, E., Rojas, E., Moon, EY., Laconi, E., Marongiu, F., Al-Mulla, F., Chiaradonna, F., Darroudi, F., Martin, FL., Van Schooten, FJ., Goldberg, GS., Wagemaker, G., Nangami, G., Calaf, GM., Williams, G., Wolf, GT., Koppen, G., Brunborg, G., Lyerly, HK., Krishnan, H., Ab Hamid, H., Yasaei, H., Sone, H., Kondoh, H., Salem, HK., Hsu, HY., Park, HH., Koturbash, I., Miousse, IR., Scovassi, AI., Klaunig, JE., Vondracek, J., Raju, J., Roman, J., Wise, JP., Whitfield, JR., Woodrick, J., Christopher, JA., Ochieng, J., Martinez-Leal, JF., Weisz, J., Kravchenko, J., Sun, J., Prudhomme, KR., Narayanan, KB., Cohen-Solal, KA., Moorwood, K., Gonzalez, L., Soucek, L., Jian, L., D'Abronzo, LS., Lin, LT., Li, L., Gulliver, L., McCawley, LJ., Memeo, L., Vermeulen, L., Leyns, L., Zhang, LP., Valverde, M., Khatami, M., Romano, MF., Chapellier, M., Williams, MA., Wade, M., Manjili, MH., Lleonart, M., Xia, MH., Gonzalez, MJ., Karamouzis, MV., Kirsch-Volders, M., Vaccari, M., Kuemmerle, NB., Singh, N., Cruickshanks, N., Kleinstreuer, N., van Larebeke, N., Ahmed, N., Ogunkua, O., Krishnakumar, PK., Vadgama, P., Marignani, PA., Ghosh, PM., Ostrosky-Wegman, P., Thompson, P., Dent, P., Heneberg, P., Darbre, P., Leung, PS., Nangia-Makker, P., Cheng, Q., Robey, RB., Al-Temaimi, R., Roy, R., Andrade-Vieira, R., Sinha, RK., Mehta, R., Vento, R., Di Fiore, R., Ponce-Cusi, R., Dornetshuber-Fleiss, R., Nahta, R., Castellino, RC., Palorini, R., Abd Hamid, R., Langie, SAS., Eltom, S., Brooks, SA., Ryeom, S., Wise, SS., Bay, SN., Harris, SA., Papagerakis, S., Romano, S., Pavanello, S., Eriksson, S., Forte, S., Casey, SC., Luanpitpong, S., Lee, TJ., Otsuki, T., Chen, T., Massfelder, T., Sanderson, T., Guarnieri, T., Hultman, T., Dormoy, V., Odero-Marah, V., Sabbisetti, V., Maguer-Satta, V., Rathmell, WK., Engstrom, W., Decker, WK., Bisson, WH., Rojanasakul, Y., Luqmani, Y., Chen, ZB., Hu, ZW. (2015), Assessing the carcinogenic potential of low-dose exposures to chemical mixtures in the environment: the challenge ahead, CARCINOGENESIS 36, S254-S296 [AIS=, IF=]
• Kaucka, M., Petersen, J., Janovska, P., Radaszkiewicz, T., Smyckova, L., Daulat, AM., Borg, JP., Schulte, G., Bryja, V. (2015), Asymmetry of VANGL2 in migrating lymphocytes as a tool to monitor activity of the mammalian WNT/planar cell polarity pathway, Cell Communication and Signaling 13 [AIS=, IF=]
• Balintova, J., Spacek, J., Pohl, R., Brazdova, M., Havran, L., Fojta, M., Hocek, M. (2015), Azidophenyl as a click-transformable redox label of DNA suitable for electrochemical detection of DNA-protein interactions, CHEMICAL SCIENCE 6, 575-587 [AIS=, IF=]
• Bowater, RP., Cobb, AM., Pivonkova, H., Havran, L., Fojta, M. (2015), Biophysical and electrochemical studies of protein-nucleic acid interactions, MONATSHEFTE FUR CHEMIE 146, 723-739 [AIS=, IF=]
• Panecka, J., Sponer, J., Trylska, J. (2015), Conformational dynamics of bacterial and human cytoplasmic models of the ribosomal A-site, BIOCHIMIE 112C, 96-110 [AIS=, IF=]
• Congur, G., Plucnara, M., Erdem, A., Fojta, M. (2015), Detection of p53 Gene by Using Genomagnetic Assay Combined with Carbon Nanotube Modified Disposable Sensor Technology, ELECTROANALYSIS 27, 1579-1586 [AIS=, IF=]
• Stavreva, DA., Coulon, A., Baek, S., Sung, MH., John, S., Stixova, L., Tesikova, M., Hakim, O., Miranda, T., Hawkins, M., Stamatoyannopoulos, JA., Chow, CC., Hager, GL. (2015), Dynamics of chromatin accessibility and long-range interactions in response to glucocorticoid pulsing, GENOME RESEARCH 25, 845-857 [AIS=, IF=]
• Kollar, P., Barta, T., Keltosova, S., Trnova, P., Zavalova, VM., Smejkal, K., Hosek, J., Fedr, R., Soucek, K., Hampl, A. (2015), Flavonoid 4 '-O-Methylkuwanon E from Morus alba Induces the Differentiation of THP-1 Human Leukemia Cells, EVIDENCE-BASED COMPLEMENTARY AND ALTERNATIVE MEDICINE [AIS=, IF=]
• Michalovova, M., Kubat, Z., Hobza, R., Vyskot, B., Kejnovsky, E. (2015), Fully automated pipeline for detection of sex linked genes using RNA-Seq data, BMC BIOINFORMATICS 16 [AIS=, IF=]
• Sharma, VK., Jelen, F., Trnkova, L. (2015), Functionalized Solid Electrodes for Electrochemical Biosensing of Purine Nucleobases and Their Analogues: A Review, SENSORS 15, 1564-1600 [AIS=, IF=]
• Muchova, V., Amiard, S., Mozgova, I., Dvorackova, M., Gallego, ME., White, C., Fajkus, J. (2015), Homology-dependent repair is involved in 45S rDNA loss in plant CAF-1 mutants, PLANT JOURNAL 81, 198-209 [AIS=, IF=]
• Blavet, N., Blavet, H., Muyle, A., Kafer, J., Cegan, R., Deschamps, C., Zemp, N., Mousset, S., Aubourg, S., Bergero, R., Charlesworth, D., Hobza, R., Widmer, A., Marais, GAB. (2015), Identifying new sex-linked genes through BAC sequencing in the dioecious plant Silene latifolia, BMC GENOMICS 16 [AIS=, IF=]
• Adamik, M., Bazantova, P., Navratilova, L., Polaskova, A., Pecinka, P., Holanova, L., Tichy, V., Brazdova, M. (2015), Impact of cadmium, cobalt and nickel on sequence-specific DNA binding of p63 and p73 in vitro and in cells, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 456, 29-34 [AIS=, IF=]
• Novohradsky, V., Bergamo, A., Cocchietto, M., Zajac, J., Brabec, V., Mestroni, G., Sava, G. (2015), Influence of the binding of reduced NAMI-A to human serum albumin on the pharmacokinetics and biological activity, DALTON TRANSACTIONS 44, 1905-1913 [AIS=, IF=]
• Haldar, S., Kuhrova, P., Banas, P., Spiwok, V., Sponer, J., Hobza, P., Otyepka, M. (2015), Insights into Stability and Folding of GNRA and UNCG Tetra loops Revealed by Microsecond Molecular Dynamics and Well-Tempered Metadynamics, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 11, 3866-3877 [AIS=, IF=]
• Buchtova, M., Chaloupkova, R., Zakrzewska, M., Vesela, I., Cela, P., Barathova, J., Gudernova, I., Zajickova, R., Trantirek, L., Martin, J., Kostas, M., Otlewski, J., Damborsky, J., Kozubik, A., Wiedlocha, A., Krejci, P. (2015), Instability restricts signaling of multiple fibroblast growth factors, CELLULAR AND MOLECULAR LIFE SCIENCES 72, 2445-2459 [AIS=, IF=]
• Nahta, R., Al-Mulla, F., Al-Temaimi, R., Amedei, A., Andrade-Vieira, R., Bay, S., Brown, DG., Calaf, GM., Castellino, RC., Cohen-Solal, KA., Colacci, A., Cruickshanks, N., Dent, P., Di Fiore, R., Forte, S., Goldberg, GS., Hamid, RA., Krishnan, H., Laird, DW., Lasfar, A., Marignani, PA., Memeo, L., Mondello, C., Naus, CC., Ponce-Cusi, R., Raju, J., Roy, D., Roy, R., Ryan, EP., Salem, HK., Scovassi, AI., Singh, N., Vaccari, M., Vento, R., Vondracek, J., Wade, M., Woodrick, J., Bisson, WH. (2015), Mechanisms of environmental chemicals that enable the cancer hallmark of evasion of growth suppression, CARCINOGENESIS 36, S2-S18 [AIS=, IF=]
• Knotigova, PT., Zyka, D., Masek, J., Kovalova, A., Krupka, M., Bartheldyova, E., Kulich, P., Koudelka, S., Lukac, R., Kauerova, Z., Vacek, A., Horynova, MS., Kozubik, A., Miller, AD., Fekete, L., Kratochvilova, I., Jezek, J., Ledvina, M., Raska, M., Turanek, J. (2015), Molecular Adjuvants Based on Nonpyrogenic Lipophilic Derivatives of norAbuMDP/GMDP Formulated in Nanoliposomes: Stimulation of Innate and Adaptive Immunity, PHARMACEUTICAL RESEARCH 32, 1186-1199 [AIS=, IF=]
• Hudcova, K., Trnkova, L., Kejnovska, I., Vorlickova, M., Gumulec, J., Kizek, R., Masarik, M. (2015), Novel biophysical determination of miRNAs related to prostate and head and neck cancers, EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 44, 131-138 [AIS=, IF=]
• Ekumi, KM., Paculova, H., Lenasi, T., Pospichalova, V., Bosken, CA., Rybarikova, J., Bryja, V., Geyer, M., Blazek, D., Barboric, M. (2015), Ovarian carcinoma CDK12 mutations misregulate expression of DNA repair genes via deficient formation and function of the Cdk12/CycK complex, NUCLEIC ACIDS RESEARCH 43, 2575-2589 [AIS=, IF=]
• Gresh, N., Sponer, JE., Devereux, M., Gkionis, K., de Courcy, B., Piquemal, JP., Sponer, J. (2015), Stacked and H-Bonded Cytosine Dimers. Analysis of the Intermolecular Interaction Energies by Parallel Quantum Chemistry and Polarizable Molecular Mechanics., JOURNAL OF PHYSICAL CHEMISTRY B 119, 9477-9495 [AIS=, IF=]
• Humpolicek, P., Radaszkiewicz, KA., Kasparkova, V., Stejskal, J., Trchova, M., Kucekova, Z., Vicarova, H., Pachernik, J., Lehocky, M., Minarik, A. (2015), Stem cell differentiation on conducting polyaniline, RSC ADVANCES 5, 68796-68805 [AIS=, IF=]
• Janockova, J., Plsikova, J., Koval', J., Jendzelovsky, R., Mikes, J., Kasparkova, J., Brabec, V., Hamulakova, S., Fedorocko, P., Kozurkova, M. (2015), Tacrine derivatives as dual topoisomerase I and II catalytic inhibitors, BIOORGANIC CHEMISTRY 59, 168-176 [AIS=, IF=]
• Fojtova, M., Sykorova, E., Najdekrova, L., Polanska, P., Zachova, D., Vagnerova, R., Angelis, KJ., Fajkus, J. (2015), Telomere dynamics in the lower plant Physcomitrella patens, PLANT MOLECULAR BIOLOGY 87, 591-601 [AIS=, IF=]
• McCarthy, EW., Arnold, SEJ., Chittka, L., Le Comber, SC., Verity, R., Dodsworth, S., Knapp, S., Kelly, LJ., Chase, MW., Baldwin, IT., Kovarik, A., Mhiri, C., Taylor, L., Leitch, AR. (2015), The effect of polyploidy and hybridization on the evolution of floral colour in Nicotiana (Solanaceae), ANNALS OF BOTANY 115, 1117-1131 [AIS=, IF=]
• Dobra, J., Cerny, M., Storchova, H., Dobrev, P., Skalak, J., Jedelsky, PL., Luksanova, H., Gaudinova, A., Pesek, B., Malbeck, J., Vanek, T., Brzobohaty, B., Vankova, R. (2015), The impact of heat stress targeting on the hormonal and transcriptomic response in Arabidopsis, PLANT SCIENCE 231, 52-61 [AIS=, IF=]
• Mlynsky, V., Walter, NG., Sponer, J., Otyepka, M., Banas, P. (2015), The role of an active site Mg2+ in HDV ribozyme self-cleavage: insights from QM/MM calculations, PHYSICAL CHEMISTRY CHEMICAL PHYSICS 17, 670-679 [AIS=, IF=]
• Kratochvilova, K., Horak, P., Esner, M., Soucek, K., Pils, D., Anees, M., Tomasich, E., Drafi, F., Jurtikova, V., Hampl, A., Krainer, M., Vanhara, P. (2015), Tumor suppressor candidate 3 (TUSC3) prevents the epithelial-to-mesenchymal transition and inhibits tumor growth by modulating the endoplasmic reticulum stress response in ovarian cancer cells, INTERNATIONAL JOURNAL OF CANCER 137, 1330-1340 [AIS=, IF=]
• Skolakova, P., Foldynova-Trantirkova, S., Bednarova, K., Fiala, R., Vorlickova, M., Trantirek, L. (2015), Unique C. elegans telomeric overhang structures reveal the evolutionarily conserved properties of telomeric DNA, NUCLEIC ACIDS RESEARCH 43, 4733-4745 [AIS=, IF=]
• Sripathi, KN., Banas, P., Reblova, K., Sponer, J., Otyepka, M., Walter, NG. (2015), Wobble pairs of the HDV ribozyme play specific roles in stabilization of active site dynamics, PHYSICAL CHEMISTRY CHEMICAL PHYSICS 17, 5887-5900 [AIS=, IF=]
• Marzo, T., Pillozzi, S., Hrabina, O., Kasparkova, J., Brabec, V., Arcangeli, A., Bartoli, G., Severi, M., Lunghi, A., Totti, F., Gabbiani, C., Quiroga, AG., Messori, L. (2015), cis-Pt I-2(NH3)(2): a reappraisal, DALTON TRANSACTIONS 44, 14896-14905 [AIS=, IF=]
• Baltes, NJ; Hummel, AW; Konecna, E; Cegan, R; Bruns, AN; Bisaro, DM; Voytas, DF (2015), Conferring resistance to geminiviruses with the CRISPR-Cas prokaryotic immune system, NATURE PLANTS [AIS=0, IF=0]
• Cermak, Tomas; Baltes, Nicholas J; Cegan, Radim; Zhang, Yong; Voytas, Daniel F (2015), High-frequency, precise modification of the tomato genome., Genome biology [AIS=0, IF=0]
• Hobza, R; Kubat, Z; Cegan, R; Jesionek, W; Vyskot, B; Kejnovsky, E (2015), Impact of repetitive DNA on sex chromosome evolution in plants, CHROMOSOME RESEARCH [AIS=0, IF=0]
• Kejnovsky, E; Tokan, V; Lexa, M (2015), Transposable elements and G-quadruplexes, CHROMOSOME RESEARCH [AIS=0, IF=0]

2014

• Navratil, R., Jelen, F., Kayran, YU., Trnkova, L. (2014), A Pencil Graphite Electrode In Situ Modified by Monovalent Copper: a Promising Tool for the Determination of Methylxanthines, ELECTROANALYSIS 26, 952-961 [AIS=, IF=]
• Plencner, M., East, B., Tonar, Z., Otahal, M., Prosecka, E., Rampichova, M., Krejci, T., Litvinec, A., Buzgo, M., Mickova, A., Necas, A., Hoch, J., Amler, E. (2014), Abdominal closure reinforcement by using polypropylene mesh functionalized with poly-epsilon-caprolactone nanofibers and growth factors for prevention of incisional hernia formation, INTERNATIONAL JOURNAL OF NANOMEDICINE 9, 3263-3277 [AIS=, IF=]
• Bartosik, M., Hrstka, R., Palecek, E., Vojtesek, B. (2014), Adsorptive Transfer Stripping for Quick Electrochemical Determination of microRNAs in Total RNA Samples, ELECTROANALYSIS 26, 2558-2562 [AIS=, IF=]
• Borkovcova, P., Pekarova, B., Valkova, M., Dopitova, R., Brzobohaty, B., Janda, L., Hejatko, J. (2014), Antibodies against CKI1(RD), a receiver domain of the sensor histidine kinase in Arabidopsis thaliana: From antigen preparation to in planta immunolocalization, PHYTOCHEMISTRY 100, 6-15 [AIS=, IF=]
• Denev, P., Kratchanova, M., Ciz, M., Lojek, A., Vasicek, O., Blazheva, D., Nedelcheva, P., Vojtek, L., Hyrsl, P. (2014), Antioxidant, antimicrobial and neutrophil-modulating activities of herb extracts, ACTA BIOCHIMICA POLONICA 61, 359-367 [AIS=, IF=]
• Kuehrova, P., Otyepka, M., Sponer, J., Banas, P. (2014), Are Waters around RNA More than Just a Solvent? - An Insight from Molecular Dynamics Simulations, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 10, 401-411 [AIS=, IF=]
• Zgarbova, M., Otyepka, M., Sponer, J., Lankas, F., Jurecka, P. (2014), Base Pair Fraying in Molecular Dynamics Simulations of DNA and RNA, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 10, 3177-3189 [AIS=, IF=]
• Denev, P., Kratchanova, M., Ciz, M., Lojek, A., Vasicek, O., Nedelcheva, P., Blazheva, D., Toshkova, R., Gardeva, E., Yossifova, L., Hyrsl, P., Vojtek, L. (2014), Biological activities of selected polyphenol-rich fruits related to immunity and gastrointestinal health, FOOD CHEMISTRY 157, 37-44 [AIS=, IF=]
• Christodoulou, MS., Thomas, A., Poulain, S., Vidakovic, M., Lahtela-Kakkonen, M., Matulis, D., Bertrand, P., Bartova, E., Blanquart, C., Mikros, E., Fokialakis, N., Passarella, D., Benhida, R., Martinet, N. (2014), Can we use the epigenetic bioactivity of caloric restriction and phytochemicals to promote healthy ageing?, MEDCHEMCOMM 5, 1804-1820 [AIS=, IF=]
• Mangelings, D., Vander Heyden, Y., Vespalec, R. (2014), Chiral separability of boron cluster species studied by screening approaches utilizing polysaccharide-based chiral stationary phases, BIOMEDICAL CHROMATOGRAPHY 28, 694-707 [AIS=, IF=]
• Majerova, E., Mandakova, T., Vu, GTH., Fajkus, J., Lysak, MA., Fojtova, M. (2014), Chromatin features of plant telomeric sequences at terminal vs. internal positions, FRONTIERS IN PLANT SCIENCE 5 [AIS=, IF=]
• Kucekova, Z., Humpolicek, P., Kasparkova, V., Perecko, T., Lehocky, M., Hauerlandova, I., Saha, P., Stejskal, J. (2014), Colloidal polyaniline dispersions: Antibacterial activity, cytotoxicity and neutrophil oxidative burst, COLLOIDS AND SURFACES B-BIOINTERFACES 116, 411-417 [AIS=, IF=]
• Mlynsky, V., Banas, P., Sponer, J., van der Kamp, MW., Mulholland, AJ., Otyepka, M. (2014), Comparison of ab Initio, DFT, and Semiempirical QM/MM Approaches for Description of Catalytic Mechanism of Hairpin Ribozyme, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 10, 1608-1622 [AIS=, IF=]
• Emadzade, K., Jang, TS., Macas, J., Kovarik, A., Novak, P., Parker, J., Weiss-Schneeweiss, H. (2014), Differential amplification of satellite PaB6 in chromosomally hypervariable Prospero autumnale complex (Hyacinthaceae), ANNALS OF BOTANY 114, 1597-1608 [AIS=, IF=]
• Kilander, MBC., Petersen, J., Andressen, KW., Ganji, RS., Levy, FO., Schuster, J., Dahl, N., Bryja, V., Schulte, G. (2014), Disheveled regulates precoupling of heterotrimeric G proteins to Frizzled 6, FASEB JOURNAL 28, 2293-2305 [AIS=, IF=]
• Bryja, V., Bernatik, O. (2014), Dishevelled at the Crossroads of Pathways, WNT SIGNALING IN DEVELOPMENT AND DISEASE: MOLECULAR MECHANISMS AND BIOLOGICAL FUNCTIONS, 207-216 [AIS=, IF=]
• Sripathi, KN., Tay, WW., Banas, P., Otyepka, M., Sponer, J., Walter, NG. (2014), Disparate HDV ribozyme crystal structures represent intermediates on a rugged free-energy landscape, RNA-A PUBLICATION OF THE RNA SOCIETY 20, 1112-1128 [AIS=, IF=]
• Pilarova, I., Kejnovska, I., Vorlickova, M., Trnkova, L. (2014), Dynamic Structures of DNA Heptamers with Different Central Trinucleotide Sequences Studied by Electrochemical and Spectral Methods, ELECTROANALYSIS 26, 2118-2128 [AIS=, IF=]
• Becher, H., Ma, L., Kelly, LJ., Kovarik, A., Leitch, IJ., Leitch, AR. (2014), Endogenous pararetrovirus sequences associated with 24 nt small RNAs at the centromeres of Fritillaria imperialis L. (Liliaceae), a species with a giant genome, PLANT JOURNAL 80, 823-833 [AIS=, IF=]
• Nevrtalova, E., Baloun, J., Hudzieczek, V., Cegan, R., Vyskot, B., Dolezel, J., Safar, J., Milde, D., Hobza, R. (2014), Expression response of duplicated metallothionein 3 gene to copper stress in Silene vulgaris ecotypes, PROTOPLASMA 251, 1427-1439 [AIS=, IF=]
• Bernatik, O., Sedova, K., Schille, C., Ganji, RS., Cervenka, I., Trantirek, L., Schambony, A., Zdrahal, Z., Bryja, V. (2014), Functional Analysis of Dishevelled-3 Phosphorylation Identifies Distinct Mechanisms Driven by Casein Kinase 1 epsilon and Frizzled5, JOURNAL OF BIOLOGICAL CHEMISTRY 289, 23520-23533 [AIS=, IF=]
• Schrofel, A., Cmarko, D., Bartova, E., Raska, I. (2014), Gold Nanoparticles for High Resolution Imaging in Modern Immunocytochemistry, INTRACELLULAR DELIVERY II: FUNDAMENTALS AND APPLICATIONS 7, 189-206 [AIS=, IF=]
• de Groot, REA., Ganji, RS., Bernatik, O., Lloyd-Lewis, B., Seipel, K., Sedova, K., Zdrahal, Z., Dhople, VM., Dale, TC., Korswagen, HC., Bryja, V. (2014), Huwe1-Mediated Ubiquitylation of Dishevelled Defines a Negative Feedback Loop in the Wnt Signaling Pathway, SCIENCE SIGNALING 7 [AIS=, IF=]
• Gkionis, K., Kruse, H., Platts, JA., Mladek, A., Koca, J., Sponer, J. (2014), Ion Binding to Quadruplex DNA Stems. Comparison of MM and QM Descriptions Reveals Sizable Polarization Effects Not Included in Contemporary Simulations, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 10, 1326-1340 [AIS=, IF=]
• Plsikova, J., Stepankova, J., Kasparkova, J., Brabec, V., Backor, M., Kozurkova, M. (2014), Lichen secondary metabolites as DNA-interacting agents, TOXICOLOGY IN VITRO 28, 182-186 [AIS=, IF=]
• Babinsky, M., Fiala, R., Kejnovska, I., Bednarova, K., Marek, R., Sagi, J., Sklenar, V., Vorlickova, M. (2014), Loss of loop adenines alters human telomere d[AG(3)(TTAG(3))(3)] quadruplex folding, NUCLEIC ACIDS RESEARCH 42, 14031-14041 [AIS=, IF=]
• Bartosik, M., Hrstka, R., Palecek, E., Vojtesek, B. (2014), Magnetic bead-based hybridization assay for electrochemical detection of microRNA, ANALYTICA CHIMICA ACTA 813, 35-40 [AIS=, IF=]
• Drsata, T., Zgarbova, M., Spackova, N., Jurecka, P., Sponer, J., Lankas, F. (2014), Mechanical Model of DNA Allostery, JOURNAL OF PHYSICAL CHEMISTRY LETTERS 5, 3831-3835 [AIS=, IF=]
• Drsata, T., Spackova, N., Jurecka, P., Zgarbova, M., Sponer, J., Lankas, F. (2014), Mechanical properties of symmetric and asymmetric DNA A-tracts: implications for looping and nucleosome positioning, NUCLEIC ACIDS RESEARCH 42, 7383-7394 [AIS=, IF=]
• Kruta, M., Seneklova, M., Raska, J., Salykin, A., Zerzankova, L., Pesl, M., Bartova, E., Franek, M., Baumeisterova, A., Koskova, S., Neelsen, KJ., Hampl, A., Dvorak, P., Rotrekl, V. (2014), Mutation Frequency Dynamics in HPRT Locus in Culture-Adapted Human Embryonic Stem Cells and Induced Pluripotent Stem Cells Correspond to Their Differentiated Counterparts, STEM CELLS AND DEVELOPMENT 23, 2443-2454 [AIS=, IF=]
• Civis, S., Zelinger, Z., Nevrly, V., Dorogan, A., Ferus, M., Iakovlev, V., Sirbu, A., Mereuta, A., Caliman, A., Suruceanu, G., Kapon, E. (2014), Near-infrared wafer-fused vertical-cavity surface-emitting lasers for HF detection, JOURNAL OF QUANTITATIVE SPECTROSCOPY & RADIATIVE TRANSFER 147, 53-59 [AIS=, IF=]
• Ungvarsky, J., Plsikova, J., Janovec, L., Koval, J., Mikes, J., Mikesova, L., Harvanova, D., Fedorocko, P., Kristian, P., Kasparkova, J., Brabec, V., Vojtickova, M., Sabolova, D., Stramova, Z., Rosocha, J., Imrich, J., Kozurkova, M. (2014), Novel trisubstituted acridines as human telomeric quadruplex binding ligands, BIOORGANIC CHEMISTRY 57, 13-29 [AIS=, IF=]
• Krivanek, J., Svandova, E., Kralik, J., Hajda, S., Fedr, R., Vinarsky, V., Jaros, J., Soucek, K., Buchtova, M., Matalova, E., Hampl, A. (2014), Properties of Neural Crest-Like Cells Differentiated from Human Embryonic Stem Cells, FOLIA BIOLOGICA 60, 30-38 [AIS=, IF=]
• Klinke, A., Moller, A., Pekarova, M., Ravekes, T., Friedrichs, K., Berlin, M., Scheu, KM., Kubala, L., Kolarova, H., Ambrozova, G., Schermuly, RT., Woodcock, SR., Freeman, BA., Rosenkranz, S., Baldus, S., Rudolph, V., Rudolph, TK. (2014), Protective Effects of 10-nitro-oleic Acid in a Hypoxia-Induced Murine Model of Pulmonary Hypertension, AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY 51, 155-162 [AIS=, IF=]
• Kruse, H., Havrila, M., Sponer, J. (2014), QM Computations on Complete Nucleic Acids Building Blocks: Analysis of the Sarcin-Ricin RNA Motif Using DFT-D3, HF-3c, PM6-D3H, and MM Approaches, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 10, 2615-2629 [AIS=, IF=]
• Adam, M., Gajdova, S., Kolarova, H., Kubala, L., Lau, D., Geisler, A., Ravekes, T., Rudolph, V., Tsao, PS., Blankenberg, S., Baldus, S., Klinke, A. (2014), Red blood cells serve as intravascular carriers of myeloperoxidase, JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY 74, 353-363 [AIS=, IF=]
• Panecka, J., Havrila, M., Reblova, K., Sponer, J., Trylska, J. (2014), Role of S-turn2 in the Structure, Dynamics, and Function of Mitochondrial Ribosomal A-Site. A Bioinformatics and Molecular Dynamics Simulation Study, JOURNAL OF PHYSICAL CHEMISTRY B 118, 6687-6701 [AIS=, IF=]
• Civis, S., Ferus, M., Sponer, JE., Sponer, J., Kavan, L., Zukalova, M. (2014), Room temperature spontaneous conversion of OCS to CO2 on the anatase TiO2 surface, CHEMICAL COMMUNICATIONS 50, 7712-7715 [AIS=, IF=]
• Ferus, M., Kavan, L., Zukalova, M., Zukal, A., Klementova, M., Civis, S. (2014), Spontaneous and Photoinduced Conversion of CO2 on TiO2 Anatase (001)/(101) Surfaces, JOURNAL OF PHYSICAL CHEMISTRY C 118, 26845-26850 [AIS=, IF=]
• Smigova, J., Juda, P., Krejci, J., Raska, I. (2014), Structural Basis of Polycomb Bodies, FOLIA BIOLOGICA 60, 13-20 [AIS=, IF=]
• Vaverkova, V., Vrana, O., Adam, V., Pekarek, T., Jampilek, J., Babula, P. (2014), The Study of Naphthoquinones and Their Complexes with DNA by Using Raman Spectroscopy and Surface Enhanced Raman Spectroscopy: New Insight into Interactions of DNA with Plant Secondary Metabolites, BIOMED RESEARCH INTERNATIONAL [AIS=, IF=]
• Vaverkova, V., Vrana, O., Adam, V., Pekarek, T., Jampilek, J., Babula, P. (2014), The Study of Naphthoquinones and Their Complexes with DNA by Using Raman Spectroscopy and Surface Enhanced Raman Spectroscopy: New Insight into Interactions of DNA with Plant Secondary Metabolites, BIOMED RESEARCH INTERNATIONAL [AIS=, IF=]
• Dib, K., Perecko, T., Jenei, V., McFarlane, C., Comer, D., Brown, V., Katebe, M., Scheithauer, T., Thurmond, RL., Chazot, PL., Ennis, M. (2014), The histamine H-4 receptor is a potent inhibitor of adhesion-dependent degranulation in human neutrophils, JOURNAL OF LEUKOCYTE BIOLOGY 96, 411-418 [AIS=, IF=]
• Steinmetz, B., Hackl, H., Slabakova, E., Schwarzinger, I., Smejova, M., Spittler, A., Arbesu, I., Shehata, M., Soucek, K., Wieser, R. (2014), The oncogene EVI1 enhances transcriptional and biological responses of human myeloid cells to all-trans retinoic acid, CELL CYCLE 13, 2931-2943 [AIS=, IF=]
• Juda, P., Smigova, J., Kovacik, L., Bartova, E., Raska, I. (2014), Ultrastructure of Cytoplasmic and Nuclear Inosine-5 '-Monophosphate Dehydrogenase 2 "Rods and Rings" Inclusions, JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY 62, 739-750 [AIS=, IF=]
• Sorokin, DV., Suchankova, J., Bartova, E., Matula, P. (2014), Visualizing Stable Features in Live Cell Nucleus for Evaluation of the Cell Global Motion Compensation, FOLIA BIOLOGICA 60, 45-49 [AIS=, IF=]
• Seitz, K., Dursch, V., Harnos, J., Bryja, V., Gentzel, M., Schambony, A. (2014), beta-Arrestin Interacts with the Beta/Gamma Subunits of Trimeric G-Proteins and Dishevelled in the Wnt/Ca2+ Pathway in Xenopus Gastrulation, PLOS ONE 9 [AIS=, IF=]
• Kriz, V., Pospichalova, V., Masek, J., Kilander, MBC., Slavik, J., Tanneberger, K., Schulte, G., Machala, M., Kozubik, A., Behrens, J., Bryja, V. (2014), beta-Arrestin Promotes Wnt-induced Low Density Lipoprotein Receptor-related Protein 6 (Lrp6) Phosphorylation via Increased Membrane Recruitment of Amer1 Protein, JOURNAL OF BIOLOGICAL CHEMISTRY 289, 1128-1141 [AIS=, IF=]
• Pasi, M., Maddocks, JH., Beveridge, D., Bishop, TC., Case, DA., Cheatham, TC., Dans, PD., Jayaram, B., Lankas, F., Laughton, C., Mitchell, J., Osman, R., Orozco, M., Perez, A., Petkeviciute, D., Spackova, N., Sponer, J., Zakrzewska, K., Lavery, R. (2014), mu ABC: a systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA, NUCLEIC ACIDS RESEARCH 42, 12272-12283 [AIS=, IF=]
• Poltronieri, J., Marquioni, V., Bertollo, LAC., Kejnovsky, E., Molina, WF., Liehr, T., Cioffi, MB. (2014), Comparative Chromosomal Mapping of Microsatellites in Leporinus Species (Characiformes, Anostomidae): Unequal Accumulation on the W Chromosomes, CYTOGENETIC AND GENOME RESEARCH 142, 40-45 [AIS=0, IF=0]
• Ogrocka, A., Polanska, P., Majerova, E., Janeba, Z., Fajkus, J., Fojtova, M. (2014), Compromised telomere maintenance in hypomethylated Arabidopsis thaliana plants, NUCLEIC ACIDS RESEARCH 42, 2919-2931 [AIS=0, IF=0]
• Fojtova, M., Fajkus, J. (2014), Epigenetic Regulation of Telomere Maintenance, CYTOGENETIC AND GENOME RESEARCH 143, 125-135 [AIS=0, IF=0]
• Lexa, M., Kejnovsky, E., Steflova, P., Konvalinova, H., Vorlickova, M., Vyskot, B. (2014), Quadruplex-forming sequences occupy discrete regions inside plant LTR retrotransposons, NUCLEIC ACIDS RESEARCH 42, 968-978 [AIS=0, IF=0]
• Schrumpfova, PP., Vychodilova, I., Dvorackova, M., Majerska, J., Dokladal, L., Schorova, S., Fajkus, J. (2014), Telomere repeat binding proteins are functional components of Arabidopsis telomeres and interact with telomerase, PLANT JOURNAL 77, 770-781 [AIS=0, IF=0]

2013

• Jaske, K., Mokros, P., Mozgova, I., Fojtova, M., Fajkus, J. (2013), A telomerase-independent component of telomere loss in chromatin assembly factor 1 mutants of Arabidopsis thaliana, CHROMOSOMA 122, 285-293 [AIS=, IF=]
• Frybortova, M., Novakova, O., Stepankova, J., Novohradsky, V., Gibson, D., Kasparkova, J., Brabec, V. (2013), Activation of trans geometry in bifunctional mononuclear platinum complexes by a non-bulky methylamine ligand, JOURNAL OF INORGANIC BIOCHEMISTRY 126, 46-54 [AIS=, IF=]
• Dadova, J., Vidlakova, P., Pohl, R., Havran, L., Fojta, M., Hocek, M. (2013), Aqueous Heck Cross-Coupling Preparation of Acrylate-Modified Nucleotides and Nucleoside Triphosphates for Polymerase Synthesis of Acrylate-Labeled DNA, JOURNAL OF ORGANIC CHEMISTRY 78, 9627-9637 [AIS=, IF=]
• Svizenska, IH., Brazda, V., Klusakova, I., Dubovy, P. (2013), Bilateral Changes of Cannabinoid Receptor Type 2 Protein and mRNA in the Dorsal Root Ganglia of a Rat Neuropathic Pain Model, JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY 61, 529-547 [AIS=, IF=]
• Renciuk, D., Blacque, O., Vorlickova, M., Spingler, B. (2013), Crystal structures of B-DNA dodecamer containing the epigenetic modifications 5-hydroxymethylcytosine or 5-methylcytosine, NUCLEIC ACIDS RESEARCH 41, 9891-9900 [AIS=, IF=]
• Novotna, E., Tichy, A., Pejchal, J., Lukasova, E., Salovska, B., Vavrova, J. (2013), DNA-dependent protein kinase and its inhibition in support of radiotherapy, INTERNATIONAL JOURNAL OF RADIATION BIOLOGY 89, 416-423 [AIS=, IF=]
• Zhao, Y., Woods, JA., Farrer, NJ., Robinson, KS., Pracharova, J., Kasparkova, J., Novakova, O., Li, HL., Salassa, L., Pizarro, AM., Clarkson, GJ., Song, LJ., Brabec, V., Sadler, PJ. (2013), Diazido Mixed-Amine Platinum(IV) Anticancer Complexes Activatable by Visible-Light Form Novel DNA Adducts, CHEMISTRY-A EUROPEAN JOURNAL 19, 9578-9591 [AIS=, IF=]
• Renny-Byfield, S., Kovarik, A., Kelly, LJ., Macas, J., Novak, P., Chase, MW., Nichols, RA., Pancholi, MR., Grandbastien, MA., Leitch, AR. (2013), Diploidization and genome size change in allopolyploids is associated with differential dynamics of low- and high-copy sequences, PLANT JOURNAL 74, 829-839 [AIS=, IF=]
• Brazda, V., Klusakova, I., Svizenska, IH., Dubovy, P. (2013), Dynamic response to peripheral nerve injury detected by in situ hybridization of IL-6 and its receptor mRNAs in the dorsal root ganglia is not strictly correlated with signs of neuropathic pain, MOLECULAR PAIN 9 [AIS=, IF=]
• Smigova, J., Juda, P., Bartova, E., Raska, I. (2013), Dynamics of Polycomb chromatin domains under conditions of increased molecular crowding, BIOLOGY OF THE CELL 105, 519-534 [AIS=, IF=]
• Ruszova, E., Cheel, J., Pavek, S., Moravcova, M., Hermannova, M., Matejkova, I., Spilkova, J., Velebny, V., Kubala, L. (2013), Epilobium angustifolium extract demonstrates multiple effects on dermal fibroblasts in vitro and skin photo-protection in vivo, GENERAL PHYSIOLOGY AND BIOPHYSICS 32, 347-359 [AIS=, IF=]
• Hronesova, L., Holacka, K., Polaskova, A., Adamik, M., Navratilova, L., Tichy, V., Helma, R., Ballova, L., Busova, M., Bazantova, P., Fojta, M., Brazdova, M. (2013), INFLUENCE OF P53 MUTATION ON RESPONSE OF HUMAN GLIOBLASTOMA TO CYTOSTATIC TREATMENT, CHEMICKE LISTY 107, S376-S377 [AIS=, IF=]
• Vavrova, J., Zarybnicka, L., Lukasova, E., Rezacova, M., Novotna, E., Sinkorova, Z., Tichy, A., Pejchal, J., Durisova, K. (2013), Inhibition of ATR kinase with the selective inhibitor VE-821 results in radiosensitization of cells of promyelocytic leukaemia (HL-60), RADIATION AND ENVIRONMENTAL BIOPHYSICS 52, 471-479 [AIS=, IF=]
• Horova, V., Hradilova, N., Jelinkova, I., Koc, M., Svadlenka, J., Brazina, J., Klima, M., Slavik, J., Vaculova, AH., Andera, L. (2013), Inhibition of vacuolar ATPase attenuates the TRAIL-induced activation of caspase-8 and modulates the trafficking of TRAIL receptosomes, FEBS JOURNAL 280, 3436-3450 [AIS=, IF=]
• De Rache, A., Doneux, T., Kejnovska, I., Buess-Herman, C. (2013), On the interaction between [Ru(NH3)(6)](3+) and the G-quadruplex forming thrombin binding aptamer sequence, JOURNAL OF INORGANIC BIOCHEMISTRY 126, 84-90 [AIS=, IF=]
• Szabla, R., Tuna, D., Gora, RW., Sponer, J., Sobolewski, AL., Domcke, W. (2013), Photochemistry of 2-Aminooxazole, a Hypothetical Prebiotic Precursor of RNA Nucleotides, JOURNAL OF PHYSICAL CHEMISTRY LETTERS 4, 2785-2788 [AIS=, IF=]
• Kollar, P., Barta, T., Hosek, J., Soucek, K., Zavalova, VM., Artinian, S., Talhouk, R., Smejkal, K., Suchy, P., Hampl, A. (2013), Prenylated Flavonoids from Morus alba L. Cause Inhibition of G1/S Transition in THP-1 Human Leukemia Cells and Prevent the Lipopolysaccharide-Induced Inflammatory Response, EVIDENCE-BASED COMPLEMENTARY AND ALTERNATIVE MEDICINE [AIS=, IF=]
• Pino, S., Costanzo, G., Giorgi, A., Sponer, J., Sponer, JE., Di Mauro, E. (2013), Ribozyme Activity of RNA Nonenzymatically Polymerized from 3 ',5 '-Cyclic GMP, ENTROPY 15, 5362-5383 [AIS=, IF=]
• Zachova, D., Fojtova, M., Dvorackova, M., Mozgova, I., Lermontova, I., Peska, V., Schubert, I., Fajkus, J., Sykorova, E. (2013), Structure-function relationships during transgenic telomerase expression in Arabidopsis, PHYSIOLOGIA PLANTARUM 149, 114-126 [AIS=, IF=]
• Soldano, A., Okray, Z., Janovska, P., Tmejova, K., Reynaud, E., Claeys, A., Yan, JK., Atak, ZK., De Strooper, B., Dura, JM., Bryja, V., Hassan, BA. (2013), The Drosophila Homologue of the Amyloid Precursor Protein Is a Conserved Modulator of Wnt PCP Signaling, PLOS BIOLOGY 11 [AIS=, IF=]
• Perecko, T., Drabikova, K., Lojek, A., Ciz, M., Ponist, S., Bauerova, K., Nosal, R., Harmatha, J., Jancinova, V. (2013), The Effects of Pterostilbene on Neutrophil Activity in Experimental Model of Arthritis, BIOMED RESEARCH INTERNATIONAL [AIS=, IF=]
• Mandakova, T., Kovarik, A., Zozomova-Lihova, J., Shimizu-Inatsugi, R., Shimizu, KK., Mummenhoff, K., Marhold, K., Lysak, MA. (2013), The More the Merrier: Recent Hybridization and Polyploidy in Cardamine, PLANT CELL 25, 3280-3295 [AIS=, IF=]
• Blahova, L., Adamovsky, O., Kubala, L., Sindlerova, LS., Zounkova, R., Blaha, L. (2013), The isolation and characterization of lipopolysaccharides from Microcystis aeruginosa, a prominent toxic water bloom forming cyanobacteria, TOXICON 76, 187-196 [AIS=, IF=]
• Zgarbova, M., Luque, FJ., Sponer, J., Cheatham, TE., Otyepka, M., Jurecka, P. (2013), Toward Improved Description of DNA Backbone: Revisiting Epsilon and Zeta Torsion Force Field Parameters, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 9, 2339-2354 [AIS=, IF=]
• Vermeersch, L., De Winne, N., Nolf, J., Bleys, A., Kovarik, A., Depicker, A. (2013), Transitive RNA silencing signals induce cytosine methylation of a transgenic but not an endogenous target, PLANT JOURNAL 74, 867-879 [AIS=, IF=]
• Dadova, J., Orsag, P., Pohl, R., Brazdova, M., Fojta, M., Hocek, M. (2013), Vinylsulfonamide and Acrylamide Modification of DNA for Cross-linking with Proteins, ANGEWANDTE CHEMIE-INTERNATIONAL EDITION 52, 10515-10518 [AIS=, IF=]
• Andersson, ER., Salto, C., Villaescusa, JC., Cajanek, L., Yang, SZ., Bryjova, L., Nagy, II., Vainio, SJ., Ramirez, C., Bryja, V., Arenas, E. (2013), Wnt5a cooperates with canonical Wnts to generate midbrain dopaminergic neurons in vivo and in stem cells, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 110, E602-E610 [AIS=4.892, IF=9.737]
• Islam, B., Sgobba, M., Laughton, C., Orozco, M., Sponer, J., Neidle, S., Haider, S. (2013), Conformational dynamics of the human propeller telomeric DNA quadruplex on a microsecond time scale, NUCLEIC ACIDS RESEARCH 41, 2723-2735 [AIS=3.28, IF=8.278]
• Kruta, M., Balek, L., Hejnova, R., Dobsakova, Z., Eiselleova, L., Matulka, K., Barta, T., Fojtik, P., Fajkus, J., Hampl, A., Dvorak, P., Rotrekl, V. (2013), Decrease in Abundance of Apurinic/Apyrimidinic Endonuclease Causes Failure of Base Excision Repair in Culture-Adapted Human Embryonic Stem Cells, STEM CELLS 31, 693-702 [AIS=2.744, IF=7.701]
• Kuhrova, P., Banas, P., Best, RB., Sponer, J., Otyepka, M. (2013), Computer Folding of RNA Tetraloops? Are We There Yet?, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 9, 2115-2125 [AIS=1.865, IF=5.389]
• Cajanek, L., Ganji, RS., Henriques-Oliveira, C., Theofilopoulos, S., Konik, P., Bryja, V., Arenas, E. (2013), Tiam1 Regulates the Wnt/Dvl/Rac1 Signaling Pathway and the Differentiation of Midbrain Dopaminergic Neurons, MOLECULAR AND CELLULAR BIOLOGY 33, 59-70 [AIS=2.788, IF=5.372]
• Faust, D., Vondracek, J., Krcmar, P., Smerdova, L., Prochazkova, J., Hruba, E., Hulinkova, P., Kaina, B., Dietrich, C., Machala, M. (2013), AhR-mediated changes in global gene expression in rat liver progenitor cells, ARCHIVES OF TOXICOLOGY 87, 681-698 [AIS=0.865, IF=5.215]
• Drsata, T., Perez, A., Orozco, M., Morozov, AV., Sponer, J., Lankas, F. (2013), Structure, Stiffness and Substates of the Dickerson-Drew Dodecamer, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 9, 707-721 [AIS=1.718, IF=5.215]
• Dubovy, P., Brazda, V., Klusakova, I., Hradilova-Svizenska, I. (2013), Bilateral elevation of interleukin-6 protein and mRNA in both lumbar and cervical dorsal root ganglia following unilateral chronic compression injury of the sciatic nerve, JOURNAL OF NEUROINFLAMMATION 10 [AIS=1.344, IF=4.351]
• Sevcik, J., Falk, M., Macurek, L., Kleiblova, P., Lhota, F., Hojny, J., Stefancikova, L., Janatova, M., Bartek, J., Stribrna, J., Hodny, Z., Jezkova, L., Pohlreich, P., Kleibl, Z. (2013), Expression of human BRCA1 Delta 17-19 alternative splicing variant with a truncated BRCT domain in MCF-7 cells results in impaired assembly of DNA repair complexes and aberrant DNA damage response, CELLULAR SIGNALLING 25, 1186-1193 [AIS=1.455, IF=4.304]
• Josypcuk, B., Fojta, M., Yosypchuk, O. (2013), Thiolate monolayers formed on different amalgam electrodes. Part II: Properties and application, JOURNAL OF ELECTROANALYTICAL CHEMISTRY 694, 84-93 [AIS=0.649, IF=2.672]
• Hofer, M., Pospisil, M., Hoferova, Z., Komurkova, D., Paral, P., Savvulidi, F., Sefc, L. (2013), The pharmacological activation of adenosine A(1) and A(3) receptors does not modulate the long- or short-term repopulating ability of hematopoietic stem and multipotent progenitor cells in mice, PURINERGIC SIGNALLING 9, 207-214 [AIS=0.9, IF=2.635]
• Popov, A., Smirnov, E., Kovacik, L., Raska, O., Hagen, G., Stixova, L., Raska, I. (2013), Duration of the first steps of the human rRNA processing, NUCLEUS-AUSTIN 4, 134-141 [AIS=0, IF=0]
• Quante, T., Otto, B., Brazdova, M., Kejnovska, I., Deppert, W., Tolstonog, G.V., (2013), Mutant p53 is a transcriptional co-factor that binds to G-rich regulatory regions of active genes and generates transcriptional plasticity, CELL CYCLE [AIS=1.713, IF=5.359]

2012

• Chaki, M., Airik, R., Ghosh, AK., Giles, RH., Chen, R., Slaats, GG., Wang, H., Hurd, TW., Zhou, WB., Cluckey, A., Gee, HY., Ramaswami, G., Hong, CJ., Hamilton, BA., Cervenka, I., Ganji, RS., Bryja, V., Arts, HH., van Reeuwijk, J., Oud, MM., Letteboer, SJF., Roepman, R., Husson, H., Ibraghimov-Beskrovnaya, O., Yasunaga, T., Walz, G., Eley, L., Sayer, JA., Schermer, B., Liebau, MC., Benzing, T., Le Corre, S., Drummond, I., Janssen, S., Allen, SJ., Natarajan, S., O'Toole, JF., Attanasio, M., Saunier, S., Antignac, C., Koenekoop, RK., Ren, HN., Lopez, I., Nayir, A., Stoetzel, C., Dollfus, H., Massoudi, R., Gleeson, JG., Andreoli, SP., Doherty, DG., Lindstrad, A., Golzio, C., Katsanis, N., Pape, L., Abboud, EB., Al-Rajhi, AA., Lewis, RA., Omran, H., Lee, EYHP., Wang, SH., Sekiguchi, JM., Saunders, R., Johnson, CA., Garner, E., Vanselow, K., Andersen, JS., Shlomai, J., Nurnberg, G., Nurnberg, P., Levy, S., Smogorzewska, A., Otto, EA., Hildebrandt, F. (2012), Exome Capture Reveals ZNF423 and CEP164 Mutations, Linking Renal Ciliopathies to DNA Damage Response Signaling, CELL 150, 533-548 [AIS=20.554, IF=32.403]
• Wang, YL., Zhou, XY., Oberoi, K., Phelps, R., Couwenhoven, R., Sun, M., Rezza, A., Holmes, G., Percival, CJ., Friedenthal, J., Krejci, P., Richtsmeier, JT., Huso, DL., Rendl, M., Jabs, EW. (2012), p38 Inhibition ameliorates skin and skull abnormalities in Fgfr2 Beare-Stevenson mice, JOURNAL OF CLINICAL INVESTIGATION 122, 2153-2164 [AIS=6.944, IF=13.069]
• Rudolph, TK., Wipper, S., Reiter, B., Rudolph, V., Coym, A., Detter, C., Lau, D., Klinke, A., Friedrichs, K., Rau, T., Pekarova, M., Russ, D., Knoll, K., Kolk, M., Schroeder, B., Wegscheider, K., Andresen, H., Schwedhelm, E., Boeger, R., Ehmke, H., Baldus, S. (2012), Myeloperoxidase deficiency preserves vasomotor function in humans, EUROPEAN HEART JOURNAL 33, 1625-1634 [AIS=3.889, IF=10.476]
• Merrill, AE., Sarukhanov, A., Krejci, P., Idoni, B., Camacho, N., Estrada, KD., Lyons, KM., Deixler, H., Robinson, H., Chitayat, D., Curry, CJ., Lachman, RS., Wilcox, WR., Krakow, D. (2012), Bent Bone Dysplasia-FGFR2 type, a Distinct Skeletal Disorder, Has Deficient Canonical FGF Signaling, AMERICAN JOURNAL OF HUMAN GENETICS 90, 550-557 [AIS=5.867, IF=10.083]
• Lee, H., Graham, JM., Rimoin, DL., Lachman, RS., Krejci, P., Tompson, SW., Nelson, SF., Krakow, D., Cohn, DH. (2012), Exome Sequencing Identifies PDE4D Mutations in Acrodysostosis, AMERICAN JOURNAL OF HUMAN GENETICS 90, 746-751 [AIS=5.867, IF=10.083]
• Ferus, M., Civis, S., Mladek, A., Sponer, J., Juha, L., Sponer, JE. (2012), On the Road from Formamide Ices to Nucleobases: IR-Spectroscopic Observation of a Direct Reaction between Cyano Radicals and Formamide in a High-Energy Impact Event, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 134, 20788-20796 [AIS=2.799, IF=9.907]
• Lee, LY., Wu, FH., Hsu, CT., Shen, SC., Yeh, HY., Liao, DC., Fang, MJ., Liu, NT., Yen, YC., Dokladal, L., Sykorova, E., Gelvin, SB., Lin, CS. (2012), Screening a cDNA Library for Protein-Protein Interactions Directly in Planta, PLANT CELL 24, 1746-1759 [AIS=3.747, IF=8.987]
• Ovaere, M., Sponer, J., Sponer, JE., Herdewijn, P., Van Meervelt, L. (2012), How does hydroxyl introduction influence the double helical structure: the stabilization of an altritol nucleic acid: ribonucleic acid duplex, NUCLEIC ACIDS RESEARCH 40, 7573-7583 [AIS=3.007, IF=8.026]
• Reblova, K., Sponer, J., Lankas, F. (2012), Structure and mechanical properties of the ribosomal L1 stalk three-way junction, NUCLEIC ACIDS RESEARCH 40, 6290-6303 [AIS=3.007, IF=8.026]
• Fonville, JM., Swart, M., Vokacova, Z., Sychrovsky, V., Sponer, JE., Sponer, J., Hilbers, CW., Bickelhaupt, FM., Wijmenga, SS. (2012), Chemical Shifts in Nucleic Acids Studied by Density Functional Theory Calculations and Comparison with Experiment, CHEMISTRY-A EUROPEAN JOURNAL 18, 12372-12387 [AIS=1.532, IF=5.925]
• Terenzi, A., Ducani, C., Blanco, V., Zerzankova, L., Westendorf, AF., Peinador, C., Quintela, JM., Bednarski, PJ., Barone, G., Hannon, MJ. (2012), DNA Binding Studies and Cytotoxicity of a Dinuclear PtII Diazapyrenium-Based Metallo-supramolecular Rectangular Box, CHEMISTRY-A EUROPEAN JOURNAL 18, 10983-10990 [AIS=1.532, IF=5.925]
• De Rache, A., Kejnovska, I., Vorlickova, M., Buess-Herman, C. (2012), Elongated Thrombin Binding Aptamer: A G-Quadruplex Cation-Sensitive Conformational Switch, CHEMISTRY-A EUROPEAN JOURNAL 18, 4392-4400 [AIS=1.532, IF=5.925]
• Borsarelli, CD., Falomir-Lockhart, LJ., Ostatna, V., Fauerbach, JA., Hsiao, HH., Urlaub, H., Palecek, E., Jares-Erijman, EA., Jovin, TM. (2012), Biophysical properties and cellular toxicity of covalent crosslinked oligomers of alpha-synuclein formed by photoinduced side-chain tyrosyl radicals, FREE RADICAL BIOLOGY AND MEDICINE 53, 1004-1015 [AIS=1.578, IF=5.423]
• Ogrocka, A., Sykorova, E., Fajkus, J., Fojtova, M. (2012), Developmental silencing of the AtTERT gene is associated with increased H3K27me3 loading and maintenance of its euchromatic environment, JOURNAL OF EXPERIMENTAL BOTANY 63, 4233-4241 [AIS=1.598, IF=5.364]
• Zgarbova, M., Luque, FJ., Sponer, J., Otyepka, M., Jurecka, P. (2012), A Novel Approach for Deriving Force Field Torsion Angle Parameters Accounting for Conformation-Dependent Solvation Effects, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 8, 3232-3242 [AIS=1.718, IF=5.215]
• Banas, P., Mladek, A., Otyepka, M., Zgarbova, M., Jurecka, P., Svozil, D., Lankas, F., Sponer, J. (2012), Can We Accurately Describe the Structure of Adenine Tracts in B-DNA? Reference Quantum-Chemical Computations Reveal Overstabilization of Stacking by Molecular Mechanics, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 8, 2448-2460 [AIS=1.716, IF=5.215]
• Krepl, M., Zgarbova, M., Stadlbauer, P., Otyepka, M., Banas, P., Koca, J., Cheatham, TE., Jurecka, P., Sponer, J. (2012), Reference Simulations of Noncanonical Nucleic Acids with Different chi Variants of the AMBER Force Field: Quadruplex DNA, Quadruplex RNA, and Z-DNA, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 8, 2506-2520 [AIS=1.716, IF=5.215]
• Tai, HC., Brodbeck, R., Kasparkova, J., Farrer, NJ., Brabec, V., Sadler, PJ., Deeth, RJ. (2012), Combined Theoretical and Computational Study of Interstrand DNA Guanine-Guanine Cross-Linking by trans-[Pt(pyridine)(2)] Derived from the Photoactivated Prodrug trans,trans,trans-[Pt(N-3)(2)(OH)(2)(pyridine)(2)], INORGANIC CHEMISTRY 51, 6830-6841 [AIS=0.964, IF=4.601]
• Riedl, J., Menova, P., Pohl, R., Orsag, P., Fojta, M., Hocek, M. (2012), GFP-like Fluorophores as DNA Labels for Studying DNA-Protein Interactions, JOURNAL OF ORGANIC CHEMISTRY 77, 8287-8293 [AIS=1.057, IF=4.45]
• Renny-Byfield, S., Kovarik, A., Chester, M., Nichols, RA., Macas, J., Novak, P., Leitch, AR. (2012), Independent, Rapid and Targeted Loss of Highly Repetitive DNA in Natural and Synthetic Allopolyploids of Nicotiana tabacum, PLOS ONE 7 [AIS=1.797, IF=4.092]
• Krejci, P., Aklian, A., Kaucka, M., Sevcikova, E., Prochazkova, J., Masek, JK., Mikolka, P., Pospisilova, T., Spoustova, T., Weis, M., Paznekas, WA., Wolf, JH., Gutkind, JS., Wilcox, WR., Kozubik, A., Jabs, EW., Bryja, V., Salazar, L., Vesela, I., Balek, L. (2012), Receptor Tyrosine Kinases Activate Canonical WNT/beta-Catenin Signaling via MAP Kinase/LRP6 Pathway and Direct beta-Catenin Phosphorylation, PLOS ONE 7 [AIS=1.797, IF=4.092]
• Blavet, N., Blavet, H., Cegan, R., Zemp, N., Zdanska, J., Janousek, B., Hobza, R., Widmer, A. (2012), Comparative analysis of a plant pseudoautosomal region (PAR) in Silene latifolia with the corresponding S-vulgaris autosome, BMC GENOMICS 13 [AIS=1.478, IF=4.073]
• Sevcik, J., Falk, M., Kleiblova, P., Lhota, F., Stefancikova, L., Janatova, M., Weiterova, L., Lukasova, E., Kozubek, S., Pohlreich, P., Kleibl, Z. (2012), The BRCA1 alternative splicing variant Delta 14-15 with an in-frame deletion of part of the regulatory serine-containing domain (SCD) impairs the DNA repair capacity in MCF-7 cells, CELLULAR SIGNALLING 24, 1023-1030 [AIS=1.478, IF=4.058]
• Knopfova, L., Benes, P., Pekarcikova, L., Hermanova, M., Masarik, M., Pernicova, Z., Soucek, K., Smarda, J. (2012), c-Myb regulates matrix metalloproteinases 1/9, and cathepsin D: implications for matrix-dependent breast cancer cell invasion and metastasis, MOLECULAR CANCER 11 [AIS=1.578, IF=3.993]
• Betanzos-Lara, S., Salassa, L., Habtemariam, A., Novakova, O., Pizarro, AM., Clarkson, GJ., Liskova, B., Brabec, V., Sadler, PJ. (2012), Photoactivatable Organometallic Pyridyl Ruthenium(II) Arene Complexes, ORGANOMETALLICS 31, 3466-3479 [AIS=0.83, IF=3.963]
• Hofmanova, J., Ciganek, M., Slavik, J., Kozubik, A., Stixova, L., Vaculova, A., Dusek, L., Machala, M. (2012), Lipid alterations in human colon epithelial cells induced to differentiation and/or apoptosis by butyrate and polyunsaturated fatty acids, JOURNAL OF NUTRITIONAL BIOCHEMISTRY 23, 539-548 [AIS=1.035, IF=3.891]
• Garcia, S., Garnatje, T., Kovarik, A. (2012), Plant rDNA database: ribosomal DNA loci information goes online, CHROMOSOMA 121, 389-394 [AIS=2.021, IF=3.847]
• Denev, PN., Kratchanov, CG., Ciz, M., Lojek, A., Kratchanova, MG. (2012), Bioavailability and Antioxidant Activity of Black Chokeberry (Aronia melanocarpa) Polyphenols: in vitro and in vivo Evidences and Possible Mechanisms of Action: A Review, COMPREHENSIVE REVIEWS IN FOOD SCIENCE AND FOOD SAFETY 11, 471-489 [AIS=1.192, IF=3.724]
• Banas, P., Sklenovsky, P., Wedekind, JE., Sponer, J., Otyepka, M. (2012), Molecular Mechanism of preQ(1) Riboswitch Action: A Molecular Dynamics Study, JOURNAL OF PHYSICAL CHEMISTRY B 116, 12721-12734 [AIS=1.161, IF=3.696]
• Starha, P., Travnicek, Z., Popa, A., Popa, I., Muchova, T., Brabec, V. (2012), How to modify 7-azaindole to form cytotoxic Pt(II) complexes: Highly in vitro anticancer effective cisplatin derivatives involving halogeno-substituted 7-azaindole, JOURNAL OF INORGANIC BIOCHEMISTRY 115, 57-63 [AIS=0.792, IF=3.354]
• Plsikova, J., Janovec, L., Koval, J., Ungvarsky, J., Mikes, J., Jendzelovsky, R., Fedorocko, P., Imrich, J., Kristian, P., Kasparkova, J., Brabec, V., Kozurkova, M. (2012), 3,6-Bis(3-alkylguanidino)acridines as DNA-intercalating antitumor agents, EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY 57, 283-295 [AIS=0.707, IF=3.346]
• Betanzos-Lara, S., Novakova, O., Deeth, RJ., Pizarro, AM., Clarkson, GJ., Liskova, B., Brabec, V., Sadler, PJ., Habtemariam, A. (2012), Bipyrimidine ruthenium(II) arene complexes: structure, reactivity and cytotoxicity, JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 17, 1033-1051 [AIS=1.029, IF=3.289]
• Vorlickova, M., Tomasko, M., Sagi, AJ., Bednarova, K., Sagi, J. (2012), 8-Oxoguanine in a quadruplex of the human telomere DNA sequence, FEBS JOURNAL 279, 29-39 [AIS=1.142, IF=3.129]
• Valovicova, Z., Mesarosova, M., Trilecova, L., Hruba, E., Marvanova, S., Krcmar, P., Milcova, A., Schmuczerova, J., Vondracek, J., Machala, M., Topinka, J., Gabelova, A. (2012), Genotoxicity of 7H-dibenzo[c,g]carbazole and its methyl derivatives in human keratinocytes, MUTATION RESEARCH-GENETIC TOXICOLOGY AND ENVIRONMENTAL MUTAGENESIS 743, 91-98 [AIS=0.752, IF=3.035]
• Hammerova, J., Uldrijan, S., Taborska, E., Vaculova, AH., Slaninova, I. (2012), Necroptosis modulated by autophagy is a predominant form of melanoma cell death induced by sanguilutine, BIOLOGICAL CHEMISTRY 393, 647-658 [AIS=1.026, IF=2.965]
• Jakubec, P., Bancirova, M., Halouzka, V., Lojek, A., Ciz, M., Denev, P., Cibicek, N., Vacek, J., Vostalova, J., Ulrichova, J., Hrbac, J. (2012), Electrochemical Sensing of Total Antioxidant Capacity and Polyphenol Content in Wine Samples Using Amperometry Online-Coupled with Microdialysis, JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 60, 7836-7843 [AIS=0.724, IF=2.823]
• Kovarik, A., Lim, KY., Souckova-Skalicka, K., Matyasek, R., Leitch, AR. (2012), A plant culture (BY-2) widely used in molecular and cell studies is genetically unstable and highly heterogeneous, BOTANICAL JOURNAL OF THE LINNEAN SOCIETY 170, 459-471 [AIS=0.612, IF=2.821]
• Lukas, Z., Falk, M., Feit, J., Soucek, O., Falkova, I., Stefancikova, L., Janousova, E., Fajkusova, L., Zaoralkova, J., Hrabalkova, R. (2012), Sequestration of MBNL1 in tissues of patients with myotonic dystrophy type 2, NEUROMUSCULAR DISORDERS 22, 604-616 [AIS=0.933, IF=2.797]
• Vavrova, J., Sinkorova, Z., Rezacova, M., Tichy, A., Filip, S., Mokry, J., Lukasova, E. (2012), Irradiated stem cells and ageing of the haematopoietic system, RADIATION AND ENVIRONMENTAL BIOPHYSICS 51, 205-213 [AIS=0, IF=1.696]
• Penttinen, N., Hason, S., Silvennoinen, M., Joska, L., Silvennoinen, R. (2012), Comparison of optical models and signals from XPS and VASE characterized titanium after PBS immersion, OPTICS COMMUNICATIONS 285, 965-968 [AIS=0.401, IF=1.486]
• Muthna, D., Vavrova, J., Lukasova, E., Tichy, A., Knizek, J., Kohlerova, R., Mazankova, N., Rezacova, M. (2012), Valproic Acid Decreases the Reparation Capacity of Irradiated MOLT-4 Cells, MOLECULAR BIOLOGY 46, 110-116 [AIS=0.159, IF=0.658]
• Muchova, T., Quintal, SM., Farrell, NP., Brabec, V., Kasparkova, J. (2012), Antitumor bifunctional dinuclear Pt-II complex BBR3535 forms interduplex DNA cross-links under molecular crowding conditions, JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 17, 239-245 [AIS=0, IF=0]
• Penttinen, N., Hason, S., Vanek, J., Silvennoinen, R. (2012), Optical analysis of adsorption sensitivity of titanium, Ti-6Al-4V, and Ti-35Nb-6Ta, APPLIED OPTICS 51, C32-C37 [AIS=0, IF=0]
• Cioffi, MD., Kejnovsky, E., Marquioni, V., Poltronieri, J., Molina, WF., Diniz, D., Bertollo, LAC. (2012), The key role of repeated DNAs in sex chromosome evolution in two fish species with ZW sex chromosome system, MOLECULAR CYTOGENETICS 5 [AIS=0, IF=0]
• Howson, SE., Bolhuis, A., Brabec, V., Clarkson, GJ., Malina, J., Rodger, A., Scott, P. (2012), Optically pure, water-stable metallo-helical 'flexicate' assemblies with antibiotic activity, NATURE CHEMISTRY 4, 31-36 [AIS=8.167, IF=17.927]
• Smetana, O., Siroky, J., Houlne, G., Opatrny, Z., Chaboute, ME. (2012), Non-apoptotic programmed cell death with paraptotic-like features in bleomycin-treated plant cells is suppressed by inhibition of ATM/ATR pathways or NtE2F overexpression, JOURNAL OF EXPERIMENTAL BOTANY 63, 2631-2644 [AIS=1.597, IF=5.364]

2011

• Cang, XH., Sponer, J., Cheatham, TE. (2011), Insight into G-DNA Structural Polymorphism and Folding from Sequence and Loop Connectivity through Free Energy Analysis, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 133, 14270-14279 [AIS=, IF=]
• Pekarova, M., Lojek, A., Martiskova, H., Vasicek, O., Bino, L., Klinke, A., Lau, D., Kuchta, R., Kadlec, J., Vrba, R., Kubala, L. (2011), New Role for L-Arginine in Regulation of Inducible Nitric-Oxide-Synthase-Derived Superoxide Anion Production in Raw 264.7 Macrophages, THESCIENTIFICWORLDJOURNAL 11, 2443-2457 [AIS=, IF=]
• von Leitner, EC., Klinke, A., Atzler, D., Slocum, JL., Lund, N., Kielstein, JT., Maas, R., Schmidt-Haupt, R., Pekarova, M., Hellwinkel, O., Tsikas, D., D'Alecy, LG., Lau, D., Willems, S., Kubala, L., Ehmke, H., Meinertz, T., Blankenberg, S., Schwedhelm, E., Gadegbeku, CA., Boger, RH., Baldus, S., Sydow, K. (2011), Pathogenic Cycle Between the Endogenous Nitric Oxide Synthase Inhibitor Asymmetrical Dimethylarginine and the Leukocyte-Derived Hemoprotein Myeloperoxidase, CIRCULATION 124, 2735-U342 [AIS=5.317, IF=14.432]
• Fiala, R., Spackova, N., Foldynova-Trantirkova, S., Sponer, J., Sklenar, V., Trantirek, L. (2011), NMR Cross-Correlated Relaxation Rates Reveal Ion Coordination Sites in DNA, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 133, 13790-13793 [AIS=2.799, IF=9.907]
• Dubreuil-Maurizi, C., Vitecek, J., Marty, L., Branciard, L., Frettinger, P., Wendehenne, D., Meyer, AJ., Mauch, F., Poinssot, B. (2011), Glutathione Deficiency of the Arabidopsis Mutant pad2-1 Affects Oxidative Stress-Related Events, Defense Gene Expression, and the Hypersensitive Response, PLANT PHYSIOLOGY 157, 2000-2012 [AIS=2.217, IF=6.535]
• Renny-Byfield, S., Chester, M., Kovarik, A., Le Comber, SC., Grandbastien, MA., Deloger, M., Nichols, RA., Macas, J., Novak, P., Chase, MW., Leitch, AR. (2011), Next Generation Sequencing Reveals Genome Downsizing in Allotetraploid Nicotiana tabacum, Predominantly through the Elimination of Paternally Derived Repetitive DNAs, MOLECULAR BIOLOGY AND EVOLUTION 28, 2843-2854 [AIS=3.604, IF=5.51]
• Bernatik, O., Ganji, RS., Dijksterhuis, JP., Konik, P., Cervenka, I., Polonio, T., Krejci, P., Schulte, G., Bryja, V. (2011), Sequential Activation and Inactivation of Dishevelled in the Wnt/beta-Catenin Pathway by Casein Kinases, JOURNAL OF BIOLOGICAL CHEMISTRY 286, 10396-10410 [AIS=2.029, IF=4.773]
• Prochazkova, J., Kabatkova, M., Bryja, V., Umannova, L., Bernatik, O., Kozubik, A., Machala, M., Vondracek, J. (2011), The Interplay of the Aryl Hydrocarbon Receptor and beta-Catenin Alters Both AhR-Dependent Transcription and Wnt/beta-Catenin Signaling in Liver Progenitors, TOXICOLOGICAL SCIENCES 122, 349-360 [AIS=1.353, IF=4.652]
• Macas, J., Kejnovsky, E., Neumann, P., Novak, P., Koblizkova, A., Vyskot, B. (2011), Next Generation Sequencing-Based Analysis of Repetitive DNA in the Model Dioceous Plant Silene latifolia, PLOS ONE 6 [AIS=1.941, IF=4.411]
• Ksiazczyk, T., Kovarik, A., Eber, F., Huteau, V., Khaitova, L., Tesarikova, Z., Coriton, O., Chevre, AM. (2011), Immediate unidirectional epigenetic reprogramming of NORs occurs independently of rDNA rearrangements in synthetic and natural forms of a polyploid species Brassica napus, CHROMOSOMA 120, 557-571 [AIS=2.431, IF=4.196]
• Majerova, E., Fojtova, M., Mozgova, I., Bittova, M., Fajkus, J. (2011), Hypomethylating drugs efficiently decrease cytosine methylation in telomeric DNA and activate telomerase without affecting telomere lengths in tobacco cells, PLANT MOLECULAR BIOLOGY 77, 371-380 [AIS=1.342, IF=4.149]
• Doneux, T., Ostatna, V., Palecek, E. (2011), On the mechanism of hydrogen evolution catalysis by proteins: A case study with bovine serum albumin, ELECTROCHIMICA ACTA 56, 9337-9343 [AIS=1.021, IF=3.65]
• Hruba, E., Vondracek, J., Libalova, H., Topinka, J., Bryja, V., Soucek, K., Machala, M. (2011), Gene expression changes in human prostate carcinoma cells exposed to genotoxic and nongenotoxic aryl hydrocarbon receptor ligands, TOXICOLOGY LETTERS 206, 178-188 [AIS=0.886, IF=3.581]
• Gabelova, A., Valovicova, Z., Mesarosova, M., Trilecova, L., Hruba, E., Marvanova, S., Krcmar, P., Milcova, A., Schmuczerova, J., Vondracek, J., Machala, M., Topinka, J. (2011), Genotoxicity of 7H-dibenzo[c,g]carbazole and Its Tissue-Specific Derivatives in Human Hepatoma HepG2 Cells Is Related to CYP1A1/1A2 Expression, ENVIRONMENTAL AND MOLECULAR MUTAGENESIS 52, 636-645 [AIS=0.743, IF=3.493]
• Pokorna, M., Kratochvil, L., Kejnovsky, E. (2011), Microsatellite distribution on sex chromosomes at different stages of heteromorphism and heterochromatinization in two lizard species (Squamata: Eublepharidae: Coleonyx elegans and Lacertidae: Eremias velox), BMC GENETICS 12 [AIS=0.819, IF=2.489]
• Orlova, DY., Borisov, VI., Kozhevnikov, VS., Maltsev, VP., Chernyshev, AV. (2011), Distribution function approach to the study of the kinetics of IgM antibody binding to Fc gamma RIIIb (CD16b) receptors on neutrophils by flow cytometry, JOURNAL OF THEORETICAL BIOLOGY 290, 1-6 [AIS=0.839, IF=2.208]
• Matyasek, R., Fulnecek, J., Leitch, AR., Kovarik, A. (2011), Analysis of two abundant, highly related satellites in the allotetraploid Nicotiana arentsii using double-strand conformation polymorphism analysis and sequencing, NEW PHYTOLOGIST 192, 747-759 [AIS=2.274, IF=6.645]
• Hocek, M., Fojta, M. (2011), Nucleobase modification as redox DNA labelling for electrochemical detection, CHEMICAL SOCIETY REVIEWS 40, 5802-5814 [AIS=8.069, IF=28.76]
• Klinke, A., Nussbaum, C., Kubala, L., Friedrichs, K., Rudolph, TK., Rudolph, V., Paust, HJ., Schroder, C., Benten, D., Lau, D., Szocs, K., Furtmuller, PG., Heeringa, P., Sydow, K., Duchstein, HJ., Ehmke, H., Schumacher, U., Meinertz, T., Sperandio, M., Baldus, S. (2011), Myeloperoxidase attracts neutrophils by physical forces, BLOOD 117, 1350-1358 [AIS=3.503, IF=10.555]
• Tanneberger, K., Pfister, AS., Kriz, V., Bryja, V., Schambony, A., Behrens, J. (2011), Structural and Functional Characterization of the Wnt Inhibitor APC Membrane Recruitment 1 (Amer1), JOURNAL OF BIOLOGICAL CHEMISTRY 286, 19204-19214 [AIS=5.299, IF=10.124]
• Tanneberger, K., Pfister, AS., Brauburger, K., Schneikert, J., Hadjihannas, MV., Kriz, V., Schulte, G., Bryja, V., Behrens, J. (2011), Amer1/WTX couples Wnt-induced formation of PtdIns(4,5)P-2 to LRP6 phosphorylation, EMBO JOURNAL 30, 1433-1443 [AIS=5.552, IF=8.993]
• Scuto, A., Krejci, P., Popplewell, L., Wu, J., Wang, Y., Kujawski, M., Kowolik, C., Xin, H., Chen, L., Wang, Y., Kretzner, L., Yu, H., Wilcox, WR., Yen, Y., Forman, S., Jove, R. (2011), The novel JAK inhibitor AZD1480 blocks STAT3 and FGFR3 signaling, resulting in suppression of human myeloma cell growth and survival, LEUKEMIA 25, 538-550 [AIS=2.82, IF=8.966]
• Cang, XH., Sponer, J., Cheatham, TE. (2011), Explaining the varied glycosidic conformational, G-tract length and sequence preferences for anti-parallel G-quadruplexes, NUCLEIC ACIDS RESEARCH 39, 4499-4512 [AIS=3.012, IF=7.836]
• Cervenka, I., Wolf, J., Masek, J., Krejci, P., Wilcox, WR., Kozubik, A., Schulte, G., Gutkind, JS., Bryja, V. (2011), Mitogen-Activated Protein Kinases Promote WNT/beta-Catenin Signaling via Phosphorylation of LRP6, MOLECULAR AND CELLULAR BIOLOGY 31, 179-189 [AIS=3.435, IF=6.057]
• Liao, JCC., Lam, R., Brazda, V., Duan, SL., Ravichandran, M., Ma, J., Xiao, T., Tempel, W., Zuo, XB., Wang, YX., Chirgadze, NY., Arrowsmith, CH. (2011), Interferon-Inducible Protein 16: Insight into the Interaction with Tumor Suppressor p53, STRUCTURE 19, 418-429 [AIS=3.126, IF=5.904]
• Campuzano, S., Kuralay, F., Lobo-Castanon, MJ., Bartosik, M., Vyavahare, K., Palecek, E., Haake, DA., Wang, J. (2011), Ternary monolayers as DNA recognition interfaces for direct and sensitive electrochemical detection in untreated clinical samples, BIOSENSORS & BIOELECTRONICS 26, 3577-3583 [AIS=1.237, IF=5.429]
• Zgarbova, M., Otyepka, M., Sponer, J., Mladek, A., Banas, P., Cheatham, TE., Jurecka, P. (2011), Refinement of the Cornell et al. Nucleic Acids Force Field Based on Reference Quantum Chemical Calculations of Glycosidic Torsion Profiles, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 7, 2886-2902 [AIS=1.764, IF=5.138]
• Sklenovsky, P., Florova, P., Banas, P., Reblova, K., Lankas, F., Otyepka, M., Sponer, J. (2011), Understanding RNA Flexibility Using Explicit Solvent Simulations: The Ribosomal and Group I Intron Reverse Kink-Turn Motifs, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 7, 2963-2980 [AIS=1.764, IF=5.138]
• Hamers, T., Kamstra, JH., Cenijn, PH., Pencikova, K., Palkova, L., Simeckova, P., Vondracek, J., Andersson, PL., Stenberg, M., Machala, M. (2011), In Vitro Toxicity Profiling of Ultrapure Non-Dioxin-like Polychlorinated Biphenyl Congeners and Their Relative Toxic Contribution to PCB Mixtures in Humans, TOXICOLOGICAL SCIENCES 121, 88-100 [AIS=1.323, IF=5.093]
• Lexa, M., Martinek, T., Burgetova, I., Kopecek, D., Brazdova, M. (2011), A dynamic programming algorithm for identification of triplex-forming sequences, BIOINFORMATICS 27, 2510-2517 [AIS=2.647, IF=4.877]
• Liu, Z., Habtemariam, A., Pizarro, AM., Fletcher, SA., Kisova, A., Vrana, O., Salassa, L., Bruijnincx, PCA., Clarkson, GJ., Brabec, V., Sadler, PJ. (2011), Organometallic Half-Sandwich Iridium Anticancer Complexes, JOURNAL OF MEDICINAL CHEMISTRY 54, 3011-3026 [AIS=1.289, IF=4.802]
• Orlova, DY., Bartova, E., Maltsev, VP., Kozubek, S., Chernyshev, AV. (2011), A Nonfitting Method Using a Spatial Sine Window Transform for Inhomogeneous Effective-Diffusion Measurements by FRAP, BIOPHYSICAL JOURNAL 100, 507-516 [AIS=1.919, IF=4.39]
• van Rijt, SH., Kostrhunova, H., Brabec, V., Sadler, PJ. (2011), Functionalization of Osmium Arene Anticancer Complexes with (Poly)arginine: Effect on Cellular Uptake, Internalization, and Cytotoxicity, BIOCONJUGATE CHEMISTRY 22, 218-226 [AIS=1.363, IF=4.35]
• Cerny, M., Dycka, F., Bobalova, J., Brzobohaty, B. (2011), Early cytokinin response proteins and phosphoproteins of Arabidopsis thaliana identified by proteome and phosphoproteome profiling, JOURNAL OF EXPERIMENTAL BOTANY 62, 921-937 [AIS=1.466, IF=4.271]
• Trilecova, L., Krckova, S., Marvanova, S., Pencikova, K., Krcmar, P., Neca, J., Hulinkova, P., Palkova, L., Ciganek, M., Milcova, A., Topinka, J., Vondracek, J., Machala, M. (2011), Toxic Effects of Methylated Benzo[a]pyrenes in Rat Liver Stem-Like Cells, CHEMICAL RESEARCH IN TOXICOLOGY 24, 866-876 [AIS=0.965, IF=4.14]
• Kilander, MBC., Dijksterhuis, JP., Ganji, RS., Bryja, V., Schulte, G. (2011), WNT-5A stimulates the GDP/GTP exchange at pertussis toxin-sensitive heterotrimeric G proteins, CELLULAR SIGNALLING 23, 550-554 [AIS=1.666, IF=4.094]
• Triantafillidi, K., Karidi, K., Novakova, O., Malina, J., Garoufis, A. (2011), DNA binding selectivity of oligopyridine-ruthenium(II)-lysine conjugate, DALTON TRANSACTIONS 40, 472-483 [AIS=0.882, IF=4.081]
• Majerska, J., Sykorova, E., Fajkus, J. (2011), Non-telomeric activities of telomerase, MOLECULAR BIOSYSTEMS 7, 1013-1023 [AIS=1.598, IF=3.859]
• Schrumpfova, PP., Fojtova, M., Mokros, P., Grasser, KD., Fajkus, J. (2011), Role of HMGB Proteins in Chromatin Dynamics and Telomere Maintenance in Arabidopsis thaliana, CURRENT PROTEIN & PEPTIDE SCIENCE 12, 105-111 [AIS=1.234, IF=3.838]
• Peska, V., Schrumpfova, PP., Fajkus, J. (2011), Using the Telobox to Search for Plant Telomere Binding Proteins, CURRENT PROTEIN & PEPTIDE SCIENCE 12, 75-83 [AIS=1.234, IF=3.838]
• Horakova, P., Macickova-Cahova, H., Pivonkova, H., Spacek, J., Havran, L., Hocek, M., Fojta, M. (2011), Tail-labelling of DNA probes using modified deoxynucleotide triphosphates and terminal deoxynucleotidyl tranferase. Application in electrochemical DNA hybridization and protein-DNA binding assays, ORGANIC & BIOMOLECULAR CHEMISTRY 9, 1366-1371 [AIS=0.971, IF=3.762]
• Benes, P., Knopfova, L., Trcka, F., Nemajerova, A., Pinheiro, D., Soucek, K., Fojta, M., Smarda, J. (2011), Inhibition of topoisomerase II alpha: Novel function of wedelolactone, CANCER LETTERS 303, 29-38 [AIS=1.007, IF=3.741]
• Mladek, A., Sponer, J., Sumpter, BG., Fuentes-Cabrera, M., Sponer, JE. (2011), Theoretical modeling on the kinetics of the arsenate-ester hydrolysis: implications to the stability of As-DNA, PHYSICAL CHEMISTRY CHEMICAL PHYSICS 13, 10869-10871 [AIS=1.329, IF=3.454]
• Westendorf, AF., Zerzankova, L., Salassa, L., Sadler, PJ., Brabec, V., Bednarski, PJ. (2011), Influence of pyridine versus piperidine ligands on the chemical, DNA binding and cytotoxic properties of light activated trans,trans,trans-[Pt(N(3))(2)(OH)(2)(NH(3))(L)], JOURNAL OF INORGANIC BIOCHEMISTRY 105, 652-662 [AIS=0.871, IF=3.317]
• Vazquez-Mayagoitia, A., Horton, SR., Sumpter, BG., Sponer, J., Sponer, JE., Fuentes-Cabrera, M. (2011), On the Stabilization of Ribose by Silicate Minerals, ASTROBIOLOGY 11, 115-121 [AIS=1.204, IF=3.257]
• Matiasovic, J., Stepanova, H., Volf, J., Kubala, L., Ovesna, P., Rychlik, I., Faldyna, M. (2011), Influence of the lipopolysaccharide structure of Salmonella enterica serovar Enteritidis on interactions with pig neutrophils, VETERINARY MICROBIOLOGY 150, 167-172 [AIS=0.797, IF=3.256]
• Andrysik, Z., Vondracek, J., Marvanova, S., Ciganek, M., Neca, J., Pencikova, K., Mahadevan, B., Topinka, J., Baird, WM., Kozubik, A., Machala, M. (2011), Activation of the aryl hydrocarbon receptor is the major toxic mode of action of an organic extract of a reference urban dust particulate matter mixture: The role of polycyclic aromatic hydrocarbons, MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS 714, 53-62 [AIS=1.366, IF=3.204]
• Prochazkova, J., Kubala, L., Kotasova, H., Gudernova, I., Sramkova, Z., Pekarova, M., Sarkadi, B., Pachernik, J. (2011), ABC transporters affect the detection of intracellular oxidants by fluorescent probes, FREE RADICAL RESEARCH 45, 779-787 [AIS=0.802, IF=2.805]
• Vacek, J., Vrublova, E., Kubala, M., Janovska, M., Fojta, M., Simkova, E., Styskala, J., Skopalova, J., Hrbac, J., Ulrichova, J. (2011), Oxidation of Sanguinarine and Its Dihydro-Derivative at a Pyrolytic Graphite Electrode Using Ex Situ Voltammetry. Study of the Interactions of the Alkaloids with DNA, ELECTROANALYSIS 23, 1671-1680 [AIS=0.649, IF=2.721]
• Mikes, J., Hyzdalova, M., Koci, L., Jendzelovsky, R., Koval, J., Vaculova, A., Hofmanova, J., Kozubik, A., Fedorocko, P. (2011), Lower sensitivity of FHC fetal colon epithelial cells to photodynamic therapy compared to HT-29 colon adenocarcinoma cells despite higher intracellular accumulation of hypericin, PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES 10, 626-632 [AIS=0.815, IF=2.708]
• Buchtikova, S., Simkova, A., Rohlenova, K., Flajshans, M., Lojek, A., Lilius, EM., Hyrsl, P. (2011), The seasonal changes in innate immunity of the common carp (Cyprinus carpio), AQUACULTURE 318, 169-175 [AIS=0.547, IF=2.044]
• Mazura, P., Filipi, T., Soucek, P., Brzobohaty, B. (2011), Focused directed evolution of beta-glucosidases: theoretical versus real effectiveness of a minimal working setup and simple robust screening, CARBOHYDRATE RESEARCH 346, 238-242 [AIS=0.506, IF=1.898]
• Cioffi, MB., Kejnovsky, E., Bertollo, LAC. (2011), The Chromosomal Distribution of Microsatellite Repeats in the Genome of the Wolf Fish Hoplias malabaricus, Focusing on the Sex Chromosomes, CYTOGENETIC AND GENOME RESEARCH 132, 289-296 [AIS=0.671, IF=1.729]
• Krenova, Z., Kren, L., Blatny, J., Falk, M., Kazakov, DV., Grossmann, P., Shimada, H., Sterba, J. (2011), Extraosseal Ewing Sarcoma as a Rare Cause of the Blueberry Muffin Baby Syndrome: A Case Report and the Review of the Literature, AMERICAN JOURNAL OF DERMATOPATHOLOGY 33, 733-735 [AIS=0.339, IF=1.263]
• Bernard, V., Fojt, L., Skorpikova, J., Mornstein, V. (2011), Determination of free cisplatin in medium by differential pulse polarography after ultrasound and cisplatin treatment of a cancer cell culture, INDIAN JOURNAL OF BIOCHEMISTRY & BIOPHYSICS 48, 59-62 [AIS=0.101, IF=0.574]
• Mala, S., Kovaru, F., Misurova, L., Pavlata, L., Dvorak, R., Lojek, A. (2011), INFLUENCE OF ZINC ON INNATE IMMUNE SYSTEM IN KIDS, BULLETIN OF THE VETERINARY INSTITUTE IN PULAWY 55, 83-86 [AIS=0.062, IF=0.218]
• Zoldakova, M., Biersack, B., Kostrhunova, H., Ahmad, A., Padhye, S., Sarkar, FH., Schobert, R., Brabec, V. (2011), (Carboxydiamine)Pt(II) complexes of a combretastatin A-4 analogous chalcone: the influence of the diamine ligand on DNA binding and anticancer effects, MEDCHEMCOMM 2, 493-499 [AIS=0, IF=0]

2010

• Lankas, F., Spackova, N., Moakher, M., Enkhbayar, P., Sponer, J. (2010), A measure of bending in nucleic acids structures applied to A-tract DNA, NUCLEIC ACIDS RESEARCH 38, 3414-3422 [AIS=3, IF=7.48]
• Lavery, R., Zakrzewska, K., Beveridge, D., Bishop, TC., Case, DA., Cheatham, T., Dixit, S., Jayaram, B., Lankas, F., Laughton, C., Maddocks, JH., Michon, A., Osman, R., Orozco, M., Perez, A., Singh, T., Spackova, N., Sponer, J. (2010), A systematic molecular dynamics study of nearest-neighbor effects on base pair and base pair step conformations and fluctuations in B-DNA, NUCLEIC ACIDS RESEARCH 38, 299-313 [AIS=3, IF=7.48]
• Reblova, K., Razga, F., Li, W., Gao, HX., Frank, J., Sponer, J. (2010), Dynamics of the base of ribosomal A-site finger revealed by molecular dynamics simulations and Cryo-EM, NUCLEIC ACIDS RESEARCH 38, 1325-1340 [AIS=3, IF=7.48]
• Andrysik, Z., Bernstein, WZ., Deng, L., Myer, DL., Li, YQ., Tischfield, JA., Stambrook, PJ., Bahassi, E. (2010), The novel mouse Polo-like kinase 5 responds to DNA damage and localizes in the nucleolus, NUCLEIC ACIDS RESEARCH 38, 2931-2943 [AIS=3, IF=7.48]
• Rudolph, TK., Rudolph, V., Edreira, MM., Cole, MP., Bonacci, G., Schopfer, FJ., Woodcock, SR., Franek, A., Pekarova, M., Khoo, NKH., Hasty, AH., Baldus, S., Freeman, BA. (2010), Nitro-Fatty Acids Reduce Atherosclerosis in Apolipoprotein E-Deficient Mice, ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY 30, 938-945 [AIS=2.608, IF=7.235]
• Witte, F., Bernatik, O., Kirchner, K., Masek, J., Mahl, A., Krejci, P., Mundlos, S., Schambony, A., Bryja, V., Stricker, S. (2010), Negative regulation of Wnt signaling mediated by CK1-phosphorylated Dishevelled via Ror2, FASEB JOURNAL 24, 2417-2426 [AIS=2.521, IF=6.401]
• Lindqvist, M., Horn, Z., Bryja, V., Schulte, G., Papachristou, P., Ajima, R., Dyberg, C., Arenas, E., Yamaguchi, TP., Lagercrantz, H., Ringstedt, T. (2010), Vang-like protein 2 and Rac1 interact to regulate adherens junctions, JOURNAL OF CELL SCIENCE 123, 472-483 [AIS=3.251, IF=6.144]
• Le Comber, SC., Ainouche, ML., Kovarik, A., Leitch, AR. (2010), Making a functional diploid: from polysomic to disomic inheritance, NEW PHYTOLOGIST 186, 113-122 [AIS=2.07, IF=6.03]
• Petit, M., Guidat, C., Daniel, J., Denis, E., Montoriol, E., Bui, QT., Lim, KY., Kovarik, A., Leitch, AR., Grandbastien, MA., Mhiri, C. (2010), Mobilization of retrotransposons in synthetic allotetraploid tobacco, NEW PHYTOLOGIST 186, 135-147 [AIS=2.07, IF=6.03]
• Krejci, P., Murakami, S., Prochazkova, J., Trantirek, L., Chlebova, K., Ouyang, ZF., Aklian, A., Smutny, J., Bryja, V., Kozubik, A., Wilcox, WR. (2010), NF449 Is a Novel Inhibitor of Fibroblast Growth Factor Receptor 3 (FGFR3) Signaling Active in Chondrocytes and Multiple Myeloma Cells, JOURNAL OF BIOLOGICAL CHEMISTRY 285, 20644-20653 [AIS=2.223, IF=5.328]
• Schulte, G., Schambony, A., Bryja, V. (2010), beta-arrestins - scaffolds and signalling elements essential for WNT/Frizzled signalling pathways?, BRITISH JOURNAL OF PHARMACOLOGY 159, 1051-1058 [AIS=1.316, IF=5.204]
• Alkhader, S., Ezra, A., Kasparkova, J., Brabec, V., Yavin, E. (2010), A Metal-Free DNA Nuclease Based on a Cyclic Peptide Scaffold, BIOCONJUGATE CHEMISTRY 21, 1425-1431 [AIS=1.348, IF=4.35]
• Biton, A., Ezra, A., Kasparkova, J., Brabec, V., Yavin, E. (2010), DNA Photocleavage by DNA and DNA-LNA Amino Acid-Dye Conjugates, BIOCONJUGATE CHEMISTRY 21, 616-621 [AIS=1.348, IF=4.35]
• Ben Mosbah, I., Rosello-Catafau, J., Alfany-Fernandez, I., Rimola, A., Parellada, PP., Mitjavila, MT., Lojek, A., Ben Abdennebi, H., Boillot, O., Rodes, J., Peralta, C. (2010), Addition of Carvedilol to University Wisconsin Solution Improves Rat Steatotic and Nonsteatotic Liver Preservation, LIVER TRANSPLANTATION 16, 163-171 [AIS=1.06, IF=3.724]
• Mlynsky, V., Banas, P., Hollas, D., Reblova, K., Walter, NG., Sponer, J., Otyepka, M. (2010), Extensive Molecular Dynamics Simulations Showing That Canonical G8 and Protonated A38H(+) Forms Are Most Consistent with Crystal Structures of Hairpin Ribozyme, JOURNAL OF PHYSICAL CHEMISTRY B 114, 6642-6652 [AIS=1.396, IF=3.471]
• Sharma, P., Sponer, JE., Sponer, J., Sharma, S., Bhattacharyya, D., Mitra, A. (2010), On the Role of the cis Hoogsteen:Sugar-Edge Family of Base Pairs in Platforms and Triplets-Quantum Chemical Insights into RNA Structural Biology, JOURNAL OF PHYSICAL CHEMISTRY B 114, 3307-3320 [AIS=1.396, IF=3.471]
• Hradilova, J., Rehulka, P., Rehulkova, H., Vrbova, M., Griga, M., Brzobohaty, B. (2010), Comparative analysis of proteomic changes in contrasting flax cultivars upon cadmium exposure, ELECTROPHORESIS 31, 421-431 [AIS=0.635, IF=3.077]
• Dubovy, P., Klusakova, I., Svizenska, I., Brazda, V. (2010), Spatio-temporal changes of SDF1 and its CXCR4 receptor in the dorsal root ganglia following unilateral sciatic nerve injury as a model of neuropathic pain, HISTOCHEMISTRY AND CELL BIOLOGY 133, 323-337 [AIS=0.964, IF=3.021]
• Andersson, E., Bryjova, L., Biris, K., Yamaguchi, TP., Arenas, E., Bryja, V. (2010), Genetic Interaction Between Lrp6 and Wnt5a During Mouse Development, DEVELOPMENTAL DYNAMICS 239, 237-245 [AIS=1.4, IF=2.833]
• Labuda, J., Brett, AMO., Evtugyn, G., Fojta, M., Mascini, M., Ozsoz, M., Palchetti, I., Palecek, E., Wang, J. (2010), Electrochemical nucleic acid-based biosensors: Concepts, terms, and methodology (IUPAC Technical Report), PURE AND APPLIED CHEMISTRY 82, 1161-1187 [AIS=0.87, IF=2.29]
• Dubovy, P., Klusakova, I., Svizenska, I., Brazda, V. (2010), Satellite glial cells express IL-6 and corresponding signal-transducing receptors in the dorsal root ganglia of rat neuropathic pain model, NEURON GLIA BIOLOGY 6, 73-83 [AIS=0.95, IF=1.94]
• Vrbsky, J., Akimcheva, S., Watson, JM., Turner, TL., Daxinger, L., Vyskot, B., Aufsatz, W., Riha, K. (2010), siRNA-Mediated Methylation of Arabidopsis Telomeres, PLOS GENETICS 6, e1000986 [AIS=5.89, IF=9.53]
• Mozgova, I., Mokros, P., Fajkus, J. (2010), Dysfunction of Chromatin Assembly Factor 1 Induces Shortening of Telomeres and Loss of 45S rDNA in Arabidopsis thaliana, PLANT CELL 22, 2768-2780 [AIS=4.532, IF=9.293]
• Sousa, KM., Villaescusa, JC., Cajanek, L., Ondr, JK., Castelo-Branco, G., Hofstra, W., Bryja, V., Palmberg, C., Bergman, T., Wainwright, B., Lang, RA., Arenas, E. (2010), Wnt2 Regulates Progenitor Proliferation in the Developing Ventral Midbrain, JOURNAL OF BIOLOGICAL CHEMISTRY 285, 7246-7253 [AIS=2.222, IF=5.328]
• Foldynova-Trantirkova, S., Sekyrova, P., Tmejova, K., Brumovska, E., Bernatik, O., Blankenfeldt, W., Krejci, P., Kozubik, A., Dolezal, T., Trantirek, L., Bryja, V. (2010), Breast cancer-specific mutations in CK1 epsilon inhibit Wnt/beta-catenin and activate the Wnt/Rac1/JNK and NFAT pathways to decrease cell adhesion and promote cell migration, BREAST CANCER RESEARCH 12, R30 [AIS=1.788, IF=5.326]
• Fojtova, M., Wong, JTY., Dvorackova, M., Yan, KTH., Sykorova, E., Fajkus, J. (2010), Telomere maintenance in liquid crystalline chromosomes of dinoflagellates, CHROMOSOMA 119, 485-493 [AIS=2.267, IF=4.979]
• Banas, P., Hollas, D., Zgarbova, M., Jurecka, P., Orozco, M., Cheatham, TE., Sponer, J., Otyepka, M. (2010), Performance of Molecular Mechanics Force Fields for RNA Simulations: Stability of UUCG and GNRA Hairpins, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 6, 3836-3849 [AIS=1.746, IF=4.804]
• Reshetnikov, R., Golovin, A., Spiridonova, V., Kopylov, A., Sponer, J. (2010), Structural Dynamics of Thrombin-Binding DNA Aptamer d(GGTTGGTGTGGTTGG) Quadruplex DNA Studied by Large-Scale Explicit Solvent Simulations, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 6, 3003-3014 [AIS=1.746, IF=4.804]
• Zgarbova, M., Otyepka, M., Sponer, J., Hobza, P., Jurecka, P. (2010), Large-scale compensation of errors in pairwise-additive empirical force fields: comparison of AMBER intermolecular terms with rigorous DFT-SAPT calculations, PHYSICAL CHEMISTRY CHEMICAL PHYSICS 12, 10476-10493 [AIS=1.298, IF=4.116]
• Krejci, P., Prochazkova, J., Smutny, J., Chlebova, K., Lin, P., Aklian, A., Bryja, V., Kozubik, A., Wilcox, WR. (2010), FGFR3 signaling induces a reversible senescence phenotype in chondrocytes similar to oncogene-induced premature senescence, BONE 47, 102-110 [AIS=1.414, IF=4.089]
• Hruba, E., Trilecova, L., Marvanova, S., Krcmar, P., Vykopalova, L., Milcova, A., Libalova, H., Topinka, J., Starsichova, A., Soucek, K., Vondracek, J., Machala, M. (2010), Genotoxic polycyclic aromatic hydrocarbons fail to induce the p53-dependent DNA damage response, apoptosis or cell-cycle arrest in human prostate carcinoma LNCaP cells, TOXICOLOGY LETTERS 197, 227-235 [AIS=0.831, IF=3.479]
• Svozil, D., Hobza, P., Sponer, J. (2010), Comparison of Intrinsic Stacking Energies of Ten Unique Dinucleotide Steps in A-RNA and B-DNA Duplexes. Can We Determine Correct Order of Stability by Quantum-Chemical Calculations?, JOURNAL OF PHYSICAL CHEMISTRY B 114, 1191-1203 [AIS=1.396, IF=3.471]
• Banas, P., Walter, NG., Sponer, J., Otyepka, M. (2010), Protonation States of the Key Active Site Residues and Structural Dynamics of the glmS Riboswitch As Revealed by Molecular Dynamics, JOURNAL OF PHYSICAL CHEMISTRY B 114, 8701-8712 [AIS=1.396, IF=3.471]
• Denev, P., Ciz, M., Ambrozova, G., Lojek, A., Yanakieva, I., Kratchanova, M. (2010), Solid-phase extraction of berries' anthocyanins and evaluation of their antioxidative properties, FOOD CHEMISTRY 123, 1055-1061 [AIS=0.75, IF=3.146]
• Cajanek, L., Adlerz, L., Bryja, V., Arenas, E. (2010), WNT Unrelated Activities in Commercially Available Preparations of Recombinant WNT3a, JOURNAL OF CELLULAR BIOCHEMISTRY 111, 1077-1079 [AIS=1.151, IF=2.935]
• Vrublova, E., Ulrichova, J., Simanek, V., Fojta, M., Vacek, J. (2010), Oxidation of Protopine at a Pyrolytic Graphite Electrode Using Cyclic and Square-Wave Voltammetry, ELECTROANALYSIS 22, 2879-2883 [AIS=0.616, IF=2.63]
• Skolakova, P., Bednarova, K., Vorlickova, M., Sagi, J. (2010), Quadruplexes of human telomere dG(3)(TTAG(3))(3) sequences containing guanine abasic sites, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 399, 203-208 [AIS=0.905, IF=2.548]
• Kulikova, L., Mikes, J., Hyzdalova, M., Palumbo, G., Fedorocko, P. (2010), NF-kappa B is Not Directly Responsible for Photoresistance Induced by Fractionated Light Delivery in HT-29 Colon Adenocarcinoma Cells, PHOTOCHEMISTRY AND PHOTOBIOLOGY 86, 1285-1293 [AIS=0.707, IF=2.253]
• Breusing, N., Grune, T., Andrisic, L., Atalay, M., Bartosz, G., Biasi, F., Borovic, S., Bravo, L., Casals, I., Casillas, R., Dinischiotu, A., Drzewinska, J., Faber, H., Fauzi, NM., Gajewska, A., Gambini, J., Gradinaru, D., Kokkola, T., Lojek, A., Luczaj, W., Margina, D., Mascia, C., Mateos, R., Meinitzer, A., Mitjavila, MT., Mrakovcic, L., Munteanu, MC., Podborska, M., Poli, G., Sicinska, P., Skrzydlewska, E., Vina, J., Wiswedel, I., Zarkovic, N., Zelzer, S., Spickett, CM. (2010), An inter-laboratory validation of methods of lipid peroxidation measurement in UVA-treated human plasma samples, FREE RADICAL RESEARCH 44, 1203-1215 [AIS=0.713, IF=2.215]
• Chester, M., Sykorova, E., Fajkus, J., Leitch, AR. (2010), Single Integration and Spread of a Copia-Like Sequence Nested in rDNA Intergenic Spacers of Allium cernuum (Alliaceae), CYTOGENETIC AND GENOME RESEARCH 129, 35-46 [AIS=0.672, IF=1.729]
• Silvennoinen, R., Hason, S., Vetterl, V., Penttinen, N., Silvennoinen, M., Myller, K., Cernochova, P., Bartakova, S., Prachar, P., Cvrcek, L. (2010), Diffractive-optics-based sensor as a tool for detection of biocompatibility of titanium and titanium-doped hydrocarbon samples, APPLIED OPTICS 49, 5583-5591 [AIS=0.556, IF=1.41]
• Kratchanova, M., Denev, P., Ciz, M., Lojek, A., Mihailov, A. (2010), Evaluation of antioxidant activity of medicinal plants containing polyphenol compounds. Comparison of two extraction systems, ACTA BIOCHIMICA POLONICA 57, 229-234 [AIS=0.427, IF=1.262]
• Drabikova, K., Perecko, T., Nosal, R., Rackova, L., Ambrozova, G., Lojek, A., Smidrkal, J., Harmatha, J., Jancinova, V. (2010), Different effect of two synthetic coumarin-stilbene hybrid compounds on phagocyte activity, NEUROENDOCRINOLOGY LETTERS 31, 73-78 [AIS=0.241, IF=1.047]
• Jancinova, V., Nosal, R., Lojek, A., Ciz, M., Ambrozova, G., Mihalova, D., Bauerova, K., Harmatha, J., Perecko, T. (2010), Formation of reactive oxygen and nitrogen species in the presence of pinosylvin - an analogue of resveratrol, NEUROENDOCRINOLOGY LETTERS 31, 79-83 [AIS=0.241, IF=1.047]
• Perecko, T., Drabikova, K., Rackova, L., Ciz, M., Podborska, M., Lojek, A., Harmatha, J., Smidrkal, J., Nosal, R., Jancinova, V. (2010), Molecular targets of the natural antioxidant pterostilbene: effect on protein kinase C, caspase-3 and apoptosis in human neutrophils in vitro, NEUROENDOCRINOLOGY LETTERS 31, 84-90 [AIS=0.241, IF=1.047]

2009

• Kejnovsky, E., Leitch, IJ., Leitch, AR. (2009), Contrasting evolutionary dynamics between angiosperm and mammalian genomes, TRENDS IN ECOLOGY & EVOLUTION 24, 572-582 [AIS=7.6, IF=11.56]
• Cajanek, L., Ribeiro, D., Liste, I., Parish, CL., Bryja, V., Arenas, E. (2009), Wnt/beta-Catenin Signaling Blockade Promotes Neuronal Induction and Dopaminergic Differentiation in Embryonic Stem Cells, STEM CELLS 27, 2917-2927 [AIS=2.69, IF=7.75]
• Zirbel, CL., Sponer, JE., Sponer, J., Stombaugh, J., Leontis, NB. (2009), Classification and energetics of the base-phosphate interactions in RNA, NUCLEIC ACIDS RESEARCH 37, 4898-4918 [AIS=3, IF=7.48]
• Brazdova, M., Quante, T., Togel, L., Walter, K., Loscher, C., Tichy, V., Cincarova, L., Deppert, W., Tolstonog, GV. (2009), Modulation of gene expression in U251 glioblastoma cells by binding of mutant p53 R273H to intronic and intergenic sequences, NUCLEIC ACIDS RESEARCH 37, 1486-1500 [AIS=3, IF=7.48]
• Sychrovsky, V., Foldynova-Trantirkova, S., Spackova, N., Robeyns, K., Van Meervelt, L., Blankenfeldt, W., Vokacova, Z., Sponer, J., Trantirek, L. (2009), Revisiting the planarity of nucleic acid bases: Pyramidilization at glycosidic nitrogen in purine bases is modulated by orientation of glycosidic torsion, NUCLEIC ACIDS RESEARCH 37, 7321-7331 [AIS=3, IF=7.48]
• Krejci, P., Prochazkova, J., Bryja, V., Kozubik, A., Wilcox, WR. (2009), Molecular Pathology of the Fibroblast Growth Factor Family, HUMAN MUTATION 30, 1245-1255 [AIS=2.585, IF=6.887]
• Rudolph, V., Rudolph, TK., Kubala, L., Clauberg, N., Maas, R., Pekarova, M., Klinke, A., Lau, D., Szocs, K., Meinertz, T., Boger, RH., Baldus, S. (2009), A myeloperoxidase promoter polymorphism is independently associated with mortality in patients with impaired left ventricular function, FREE RADICAL BIOLOGY AND MEDICINE 47, 1584-1590 [AIS=1.632, IF=6.081]
• Bryja, V., Andersson, ER., Schambony, A., Esner, M., Bryjova, L., Biris, KK., Hall, AC., Kraft, B., Cajanek, L., Yamaguchi, TP., Buckingham, M., Arenas, E. (2009), The Extracellular Domain of Lrp5/6 Inhibits Noncanonical Wnt Signaling In Vivo, MOLECULAR BIOLOGY OF THE CELL 20, 924-936 [AIS=3.27, IF=5.98]
• Vrabel, M., Horakova, P., Pivonkova, H., Kalachova, L., Cernocka, H., Cahova, H., Pohl, R., Sebest, P., Havran, L., Hocek, M., Fojta, M. (2009), Base-Modified DNA Labeled by [Ru(bpy)(3)](2+) and [Os(bpy)(3)](2+) Complexes: Construction by Polymerase Incorporation of Modified Nucleoside Triphosphates, Electrochemical and Luminescent Properties, and Applications, CHEMISTRY-A EUROPEAN JOURNAL 15, 1144-1154 [AIS=1.593, IF=5.382]
• Ditzler, MA., Sponer, J., Walter, NG. (2009), Molecular dynamics suggest multifunctionality of an adenine imino group in acid-base catalysis of the hairpin ribozyme, RNA-A PUBLICATION OF THE RNA SOCIETY 15, 560-575 [AIS=2.81, IF=5.2]
• Takacova, M., Holotnakova, T., Vondracek, J., Machala, M., Pencikova, K., Gradin, K., Poellinger, L., Pastorek, J., Pastorekova, S., Kopacek, J. (2009), Role of aryl hydrocarbon receptor in modulation of the expression of the hypoxia marker carbonic anhydrase IX, BIOCHEMICAL JOURNAL 419, 419-425 [AIS=1.787, IF=5.155]
• Simeckova, P., Vondracek, J., Andrysik, Z., Zatloukalova, J., Krcmar, P., Kozubik, A., Machala, M. (2009), The 2,2',4,4',5,5'-Hexachlorobiphenyl-Enhanced Degradation of Connexin 43 Involves Both Proteasomal and Lysosomal Activities, TOXICOLOGICAL SCIENCES 107, 9-18 [AIS=1.27, IF=4.81]
• Yildirim, I., Stern, HA., Sponer, J., Spackova, N., Turner, DH. (2009), Effects of Restrained Sampling Space and Nonplanar Amino Groups on Free-Energy Predictions for RNA with Imino and Sheared Tandem GA Base Pairs Flanked by GC, CG, iGiC or iCIG Base Pairs, JOURNAL OF CHEMICAL THEORY AND COMPUTATION 5, 2088-2100 [AIS=1.731, IF=4.804]
• Krause-Heuer, AM., Grunert, R., Kuhne, S., Buczkowska, M., Wheate, NJ., Le Pevelen, DD., Boag, LR., Fisher, DM., Kasparkova, J., Malina, J., Bednarski, PJ., Brabec, V., Aldrich-Wright, JR. (2009), Studies of the Mechanism of Action of Platinum(II) Complexes with Potent Cytotoxicity in Human Cancer Cells, JOURNAL OF MEDICINAL CHEMISTRY 52, 5474-5484 [AIS=1.285, IF=4.802]
• Curuksu, J., Sponer, J., Zacharias, M. (2009), Elbow Flexibility of the kt38 RNA Kink-Turn Motif Investigated by Free-Energy Molecular Dynamics Simulations, BIOPHYSICAL JOURNAL 97, 2004-2013 [AIS=1.917, IF=4.39]
• Bernasconi, G., Antonovics, J., Biere, A., Charlesworth, D., Delph, LF., Filatov, D., Giraud, T., Hood, ME., Marais, GAB., McCauley, D., Pannell, JR., Shykoff, JA., Vyskot, B., Wolfe, LM., Widmer, A. (2009), Silene as a model system in ecology and evolution, HEREDITY 103, 5-14 [AIS=1.586, IF=4.122]
• Krejci, P., Prochazkova, J., Bryja, V., Jelinkova, P., Pejchalova, K., Kozubik, A., Thompson, LM., Wilcox, WR. (2009), Fibroblast growth factor inhibits interferon gamma-STAT1 and interleukin 6-STAT3 signaling in chondrocytes, CELLULAR SIGNALLING 21, 151-160 [AIS=1.667, IF=4.094]
• Triantafillidi, K., Karidi, K., Malina, J., Garoufis, A. (2009), Oligopyridine-ruthenium(II)-amino acid conjugates: synthesis, characterization, DNA binding properties and interactions with the oligonucleotide duplex d(5 '-CGCGCG-3 ')(2), DALTON TRANSACTIONS, 6403-6415 [AIS=0.881, IF=4.081]
• Futera, Z., Klenko, J., Sponer, JE., Sponer, J., Burda, JV. (2009), Interactions of the "Piano-stool" [Ruthenium(II)(eta(6)-arene)(en)Cl](+) Complexes With Water and Nucleobases; A initio and DFT Study, JOURNAL OF COMPUTATIONAL CHEMISTRY 30, 1758-1770 [AIS=2.215, IF=3.769]
• Banas, P., Jurecka, P., Walter, NG., Sponer, J., Otyepka, M. (2009), Theoretical studies of RNA catalysis: Hybrid QM/MM methods and their comparison with MD and QM, METHODS 49, 202-216 [AIS=1.702, IF=3.763]
• Valovicova, Z., Marvanova, S., Meszarosova, M., Srancikova, A., Trilecova, L., Milcova, A., Libalova, H., Vondracek, J., Machala, M., Topinka, J., Gabelova, A. (2009), Differences in DNA damage and repair produced by systemic, hepatocarcinogenic and sarcomagenic dibenzocarbazole derivatives in a model of rat liver progenitor cells, MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS 665, 51-60 [AIS=1.17, IF=3.56]
• Pekarova, M., Kralova, J., Kubala, L., Ciz, M., Lojek, A., Gregor, C., Hrbac, J. (2009), Continuous electrochemical monitoring of nitric oxide production in murine macrophage cell line RAW 264.7, ANALYTICAL AND BIOANALYTICAL CHEMISTRY 394, 1497-1504 [AIS=0.888, IF=3.48]
• Vokacova, Z., Budesinsky, M., Rosenberg, I., Schneider, B., Sponer, J., Sychrovsky, V. (2009), Structure and Dynamics of the ApA, ApC, CpA, and CpC RNA Dinucleoside Monophosphates Resolved with NMR Scalar Spin-Spin Couplings, JOURNAL OF PHYSICAL CHEMISTRY B 113, 1182-1191 [AIS=1.396, IF=3.471]
• Karadeniz, H., Erdem, A., Kuralay, F., Jelen, F. (2009), Indicator-based and indicator-free magnetic assays connected with disposable electrochemical nucleic acid sensor system, TALANTA 78, 187-192 [AIS=0.74, IF=3.29]
• Vokacova, Z., Bickelhaupt, FM., Sponer, J., Sychrovsky, V. (2009), Structural Interpretation of J Coupling Constants in Guanosine and Deoxyguanosine: Modeling the Effects of Sugar Pucker, Backbone Conformation, and Base Pairing, JOURNAL OF PHYSICAL CHEMISTRY A 113, 8379-8386 [AIS=0.882, IF=2.899]
• Ondrouskova, E., Slovackova, J., Pelkova, V., Prochazkova, J., Soucek, K., Benes, P., Smarda, J. (2009), Heavy metals induce phosphorylation of the Bcl-2 protein by Jun N-terminal kinase, BIOLOGICAL CHEMISTRY 390, 49-58 [AIS=1.104, IF=2.732]
• Jendzelovsky, R., Mikes, J., Koval, J., Soucek, K., Prochazkova, J., Kello, M., Sackova, V., Hofmanova, J., Kozubik, A., Fedorocko, P. (2009), Drug efflux transporters, MRP1 and BCRP, affect the outcome of hypericin-mediated photodynamic therapy in HT-29 adenocarcinoma cells, PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES 8, 1716-1723 [AIS=0.81, IF=2.71]
• Mariotti, B., Manzano, S., Kejnovsky, E., Vyskot, B., Jamilena, M. (2009), Accumulation of Y-specific satellite DNAs during the evolution of Rumex acetosa sex chromosomes, MOLECULAR GENETICS AND GENOMICS 281, 249-259 [AIS=0.99, IF=2.58]
• Masek, V., Anzenbacherova, E., Machova, M., Brabec, V., Anzenbacher, P. (2009), Interaction of antitumor platinum complexes with human liver microsomal cytochromes P450, ANTI-CANCER DRUGS 20, 305-311 [AIS=0.576, IF=2.23]
• Brazda, V., Klusakova, I., Svizenska, I., Veselkova, Z., Dubovy, P. (2009), Bilateral Changes in IL-6 Protein, but not in its Receptor gp130, in Rat Dorsal Root Ganglia Following Sciatic Nerve Ligature, CELLULAR AND MOLECULAR NEUROBIOLOGY 29, 1053-1062 [AIS=0.834, IF=2.107]
• Castagna, R., Davis, PA., Vasu, VT., Soucek, K., Cross, CE., Greci, L., Valacchi, G. (2009), Nitroxide radical TEMPO reduces ozone-induced chemokine IL-8 production in lung epithelial cells, TOXICOLOGY IN VITRO 23, 365-370 [AIS=0.55, IF=2.06]
• Mala, S., Kovaru, F., Misurova, L., Pavlata, L., Dvorak, R., Ciz, M. (2009), Influence of Selenium on Innate Immune Response in Kids, FOLIA MICROBIOLOGICA 54, 545-548 [AIS=0.164, IF=0.978]
• Bowater, RP., Davies, RJH., Palecek, E., Fojta, M. (2009), Sensitive electrochemical assays of DNA structure Electrochemical analysis of DNA, CHIMICA OGGI-CHEMISTRY TODAY 27, 50-54 [AIS=0.119, IF=0.483]
• Pernisova, M., Klima, P., Horak, J., Valkova, M., Malbeck, J., Soucek, P., Reichman, P., Hoyerova, K., Dubova, J., Friml, J., Zazimalova, E., Hejatko, J. (2009), Cytokinins modulate auxin-induced organogenesis in plants via regulation of the auxin efflux, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 106, 3609-3614 [AIS=4.86, IF=9.43]
• Hejatko, J., Ryu, H., Kim, GT., Dobesova, R., Choi, S., Choi, SM., Soucek, P., Horak, J., Pekarova, B., Palme, K., Brzobohaty, B., Hwang, I. (2009), The Histidine Kinases CYTOKININ-INDEPENDENT1 and ARABIDOPSIS HISTIDINE KINASE2 and 3 Regulate Vascular Tissue Development in Arabidopsis Shoots, PLANT CELL 21, 2008-2021 [AIS=4.53, IF=9.29]
• Yang, DH., Yoon, JY., Lee, SH., Bryja, V., Andersson, ER., Arenas, E., Kwon, YG., Choi, KY. (2009), Wnt5a Is Required for Endothelial Differentiation of Embryonic Stem Cells and Vascularization via Pathways Involving Both Wnt/beta-Catenin and Protein Kinase C alpha, CIRCULATION RESEARCH 104, 372-379 [AIS=3.903, IF=9.214]
• Salazar, L., Kashiwada, T., Krejci, P., Muchowski, P., Donoghue, D., Wilcox, WR., Thompson, LM. (2009), A novel interaction between fibroblast growth factor receptor 3 and the p85 subunit of phosphoinositide 3-kinase: activation-dependent regulation of ERK by p85 in multiple myeloma cells, HUMAN MOLECULAR GENETICS 18, 1951-1961 [AIS=3.379, IF=7.386]
• Matsushita, T., Wilcox, WR., Chan, YY., Kawanami, A., Bukulmez, H., Balmes, G., Krejci, P., Mekikian, PB., Otani, K., Yamaura, I., Warman, ML., Givol, D., Murakami, S. (2009), FGFR3 promotes synchondrosis closure and fusion of ossification centers through the MAPK pathway, HUMAN MOLECULAR GENETICS 18, 227-240 [AIS=3.379, IF=7.386]
• Chlebova, K., Bryja, V., Dvorak, P., Kozubik, A., Wilcox, WR., Krejci, P. (2009), High molecular weight FGF2: the biology of a nuclear growth factor, CELLULAR AND MOLECULAR LIFE SCIENCES 66, 225-235 [AIS=2.34, IF=6.09]
• Andersson, T., Sodersten, E., Duckworth, JK., Cascante, A., Fritz, N., Sacchetti, P., Cervenka, I., Bryja, V., Hermanson, O. (2009), CXXC5 Is a Novel BMP4-regulated Modulator of Wnt Signaling in Neural Stem Cells, JOURNAL OF BIOLOGICAL CHEMISTRY 284, 3672-3681 [AIS=2.222, IF=5.328]
• Hofr, C., Sultesova, P., Zimmermann, M., Mozgova, I., Schrumpfova, PP., Wimmerova, M., Fajkus, J. (2009), Single-Myb-histone proteins from Arabidopsis thaliana: a quantitative study of telomere-binding specificity and kinetics, BIOCHEMICAL JOURNAL 419, 221-228 [AIS=1.787, IF=5.155]
• Doneux, T., Bouffier, L., Mello, LV., Rigden, DJ., Kejnovska, I., Fernig, DG., Higgins, SJ., Nichols, RJ. (2009), Molecular Dynamics and Electrochemical Investigations of a pH-Responsive Peptide Monolayer, JOURNAL OF PHYSICAL CHEMISTRY C 113, 6792-6799 [AIS=1.284, IF=4.224]
• Triantafillidi K., Karidi K., Malina J., Garoufis A. (2009), Oligopyridine-ruthenium(II)-amino acid conjugates: synthesis, characterization, DNA binding properties and interactions with the oligonucleotide duplex d(5 '-CGCGCG-3 ')(2), DALTON TRANSACTIONS 32, 6403-6415 [AIS=0.882, IF=4.081]
• Methling K., Reszka P., Lalk M., Vrana O., Scheuch E., Siegmund W., Terhaag B., Bednarski PJ. (2009), Investigation of the in Vitro Metabolism of the Analgesic Flupirtine, DRUG METABOLISM AND DISPOSITION 37, 479-493 [AIS=0.921, IF=3.743]
• Simeckova, P., Vondracek, J., Prochazkova, J., Kozubik, A., Krcmar, P., Machala, M. (2009), 2,2 ',4,4 ',5,5 '-Hexachlorobiphenyl (PCB 153) induces degradation of adherens junction proteins and inhibits beta-catenin-dependent transcription in liver epithelial cells, TOXICOLOGY 260, 104-111 [AIS=0.8, IF=3.24]
• Kunke, D., Bryja, V., Mygland, L., Arenas, E., Krauss, S. (2009), Inhibition of canonical Wnt signaling promotes gliogenesis in P0-NSCs, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 386, 628-633 [AIS=0.905, IF=2.548]
• Vondracek, J., Krcmar, P., Prochazkova, J., Trilecova, L., Gavelova, M., Skalova, L., Szotakova, B., Buncek, M., Radilova, H., Kozubik, A., Machala, M. (2009), The role of aryl hydrocarbon receptor in regulation of enzymes involved in metabolic activation of polycyclic aromatic hydrocarbons in a model of rat liver progenitor cells, CHEMICO-BIOLOGICAL INTERACTIONS 180, 226-237 [AIS=0.745, IF=2.457]
• Maioli, E., Greci, L., Soucek, K., Hyzdalova, M., Pecorelli, A., Fortino, V., Valacchi, G. (2009), Rottlerin Inhibits ROS Formation and Prevents NF kappa B Activation in MCF-7 and HT-29 Cells, JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY [AIS=0.787, IF=1.75]
• Recek, L., Palikova, M., Lojek, A., Navratil, S. (2009), Health Status of the Nase (Chondrostoma nasus) in Breeding Farms from the Jihlava River Basin, ACTA VETERINARIA BRNO 78, 99-106 [AIS=0.104, IF=0.403]

2008

• Marais, GAB., Nicolas, M., Bergero, R., Chambrier, P., Kejnovsky, E., Moneger, F., Hobza, R., Widmer, A., Charlesworth, D. (2008), Evidence for degeneration of the Y chromosome in the dioecious plant Silene latifolia, CURRENT BIOLOGY 18, 545-549 [AIS=6.742, IF=10.992]
• Srnec, M., Chalupsky, J., Fojta, M., Zendlova, L., Havran, L., Hocek, M., Kyvala, M., Rulisek, L. (2008), Effect of spin-orbit coupling on reduction potentials of octahedral ruthenium(II/III) and osmium(II/III) complexes, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 130, 10947-10954 [AIS=2.701, IF=8.58]
• Weiss, C., Faust, D., Schreck, I., Ruff, A., Farwerck, T., Melenberg, A., Schneider, S., Oesch-Bartlomowicz, B., Zatloukalova, J., Vondracek, J., Oesch, F., Dietrich, C. (2008), TCDD deregulates contact inhibition in rat liver oval cells via Ah receptor, JunD and cyclin A, ONCOGENE 27, 2198-2207 [AIS=2.79, IF=7.13]
• Riehs, N., Akimcheva, S., Puizina, J., Bulankova, P., Idol, RA., Siroky, J., Schleiffer, A., Schweizer, D., Shippen, DE., Riha, K. (2008), Arabidopsis SMG7 protein is required for exit from meiosis, JOURNAL OF CELL SCIENCE 121, 2208-2216 [AIS=3.251, IF=6.144]
• Vacek, J., Cahova, K., Palecek, E., Bullard, DR., Lavesa-Curto, M., Bowater, RP., Fojta, M. (2008), Label-free electrochemical monitoring of DNA ligase activity, ANALYTICAL CHEMISTRY 80, 7609-7613 [AIS=1.49, IF=5.214]
• Hegmans, A., Kasparkova, J., Vrana, O., Kelland, LR., Brabec, V., Farrell, NP. (2008), Amide-based Prodrugs of spermidine-bridged dinuclear platinum. Synthesis, DNA binding, and biological activity, JOURNAL OF MEDICINAL CHEMISTRY 51, 2254-2260 [AIS=1.285, IF=4.802]
• de Mier-Vinue, J., Gay, M., Montana, AM., Saez, RI., Moreno, V., Kasparkova, J., Vrana, O., Heringova, P., Brabec, V., Boccarelli, A., Coluccia, M., Natile, G. (2008), Synthesis, biophysical studies, and antiproliferative activity of platinum(II) complexes having 1,2-bis(aminomethyl)carbobicyclic ligands, JOURNAL OF MEDICINAL CHEMISTRY 51, 424-431 [AIS=1.285, IF=4.802]
• Bugarcic, T., Habtemariam, A., Stepankova, J., Heringova, P., Kasparkova, J., Deeth, RJ., Johnstone, RDL., Prescimone, A., Parkin, A., Parsons, S., Brabec, V., Sadler, PJ. (2008), The Contrasting Chemistry and Cancer Cell Cytotoxicity of Bipyridine and Bipyridinediol Ruthenium(II) Arene Complexes, INORGANIC CHEMISTRY 47, 11470-11486 [AIS=1.018, IF=4.657]
• Lim, KY., Soltis, DE., Soltis, PS., Tate, J., Matyasek, R., Srubarova, H., Kovarik, A., Pires, JC., Xiong, ZY., Leitch, AR. (2008), Rapid Chromosome Evolution in Recently Formed Polyploids in Tragopogon (Asteraceae), PLOS ONE 3 [AIS=1.92, IF=4.35]
• Andersson, ER., Prakash, N., Cajanek, L., Minina, E., Bryja, V., Bryjova, L., Yamaguchi, TP., Hall, AC., Wurst, W., Arenas, E. (2008), Wnt5a Regulates Ventral Midbrain Morphogenesis and the Development of A9-A10 Dopaminergic Cells In Vivo, PLOS ONE 3 [AIS=1.92, IF=4.35]
• Ruckova, E., Friml, J., Schrumpfova, PP., Fajkus, J. (2008), Role of alternative telomere lengthening unmasked in telomerase knock-out mutant plants, PLANT MOLECULAR BIOLOGY 66, 637-646 [AIS=1.43, IF=3.98]
• Upham, BL., Blaha, L., Babica, P., Park, JS., Sovadinova, I., Pudrith, C., Rummel, AM., Weis, LM., Sai, K., Tithof, PK., Guzvic, M., Vondracek, J., Machala, M., Trosko, JE. (2008), Tumor promoting properties of a cigarette smoke prevalent polycyclic aromatic hydrocarbon as indicated by the inhibition of gap junctional intercellular communication via phosphatidylcholine-specific phospholipase C, CANCER SCIENCE 99, 696-705 [AIS=1.216, IF=3.771]
• Hocek, M., Fojta, M. (2008), Cross-coupling reactions of nucleoside triphosphates followed by polymerase incorporation. Construction and applications of base-functionalized nucleic acids, ORGANIC & BIOMOLECULAR CHEMISTRY 6, 2233-2241 [AIS=0.97, IF=3.76]
• Marvanova, S., Vondracek, J., Pencikova, K., Trilecova, L., Krcmar, P., Topinka, J., Novakova, Z., Milcova, A., Machala, M. (2008), Toxic effects of methylated benz[a]anthracenes in liver cells, CHEMICAL RESEARCH IN TOXICOLOGY 21, 503-512 [AIS=0.963, IF=3.74]
• Kuderova, A., Urbankova, I., Valkova, M., Malbeck, J., Brzobohaty, B., Nemethova, D., Hejatko, J. (2008), Effects of conditional IPT-Dependent cytokinin overproduction on root architecture of Arabidopsis seedlings, PLANT AND CELL PHYSIOLOGY 49, 570-582 [AIS=1.29, IF=3.59]
• Kummer, V., Maskova, J., Zraly, Z., Neca, J., Simeckova, P., Vondracek, J., Machala, M. (2008), Estrogenic activity of environmental polycyclic aromatic hydrocarbons in uterus of immature Wistar rats, TOXICOLOGY LETTERS 180, 212-221 [AIS=0.83, IF=3.48]
• Svozil, D., Sponer, JE., Marchan, I., Perez, A., Cheatham, TE., Forti, F., Luque, FJ., Orozco, M., Sponer, J. (2008), Geometrical and electronic structure variability of the sugar-phosphate backbone in nucleic acids, JOURNAL OF PHYSICAL CHEMISTRY B 112, 8188-8197 [AIS=1.396, IF=3.471]
• Kosenkov, D., Gorb, L., Shishkin, OV., Sponer, J., Leszczynski, J. (2008), Tautomeric equilibrium, stability, and hydrogen bonding in 2 '-deoxyguanosine monophosphate complexed with Mg2+, JOURNAL OF PHYSICAL CHEMISTRY B 112, 150-157 [AIS=1.396, IF=3.471]
• Silvennoinena, R., Vetterl, V., Hason, S., Tuononen, H., Silvennoinen, M., Myller, K., Cvrcek, L., Vanek, J., Prachar, P. (2008), Sensing of human plasma fibrinogen on polished, chemically etched and carbon treated titanium surfaces by diffractive optical element based sensor, OPTICS EXPRESS 16, 10130-10140 [AIS=1.24, IF=3.28]
• Chang, SB., Yang, TJ., Datema, E., van Vugt, J., Vosman, B., Kuipers, A., Meznikova, M., Szinay, D., Lankhorst, RK., Jacobsen, E., de Jong, H. (2008), FISH mapping and molecular organization of the major repetitive sequences of tomato, CHROMOSOME RESEARCH 16, 919-933 [AIS=1.298, IF=3.23]
• Bryja, V., Pachernik, J., Vondracek, J., Soucek, K., Cajanek, L., Horvath, V., Holubcova, Z., Dvorak, P., Hampl, A. (2008), Lineage specific composition of cyclin D-CDK4/CDK6-p27 complexes reveals distinct functions of CDK4, CDK6 and individual D-type cyclins in differentiating cells of embryonic origin, CELL PROLIFERATION 41, 875-893 [AIS=0.828, IF=2.917]
• Brumovska, E., Sychrovsky, V., Vokacova, Z., Sponer, J., Schneider, B., Trantirek, L. (2008), Effect of local sugar and base geometry on C-13 and N-15 magnetic shielding anisotropy in DNA nucleosides, JOURNAL OF BIOMOLECULAR NMR 42, 209-223 [AIS=0.764, IF=2.659]
• Sarzynska, J., Reblova, K., Sponer, J., Kuliaski, T. (2008), Conformational transitions of flanking purines in HIV-1 RNA dimerization initiation site kissing complexes studied by Charmm explicit solvent molecular dynamics, BIOPOLYMERS 89, 732-746 [AIS=0.871, IF=2.605]
• Torricelli, C., Fortino, V., Capurro, E., Valacchi, G., Pacini, A., Muscettola, M., Soucek, K., Maioli, E. (2008), Rottlerin inhibits the nuclear factor kappa B/Cyclin-D1 cascade in MCF-7 breast cancer cells, LIFE SCIENCES 82, 638-643 [AIS=0.691, IF=2.56]
• Ondrouskova, E., Soucek, K., Horvath, V., Smarda, J. (2008), Alternative pathways of programmed cell death are activated in cells with defective caspase-dependent apoptosis, LEUKEMIA RESEARCH 32, 599-609 [AIS=0.663, IF=2.358]
• Ruszova, E., Pavek, S., Hajkova, V., Jandova, S., Velebny, V., Papezikova, I., Kubala, L. (2008), Photoprotective effects of glucomannan isolated from Candida utilis, CARBOHYDRATE RESEARCH 343, 501-511 [AIS=0.526, IF=2.025]
• Kleban, J., Mikes, J., Horvath, V., Sackova, V., Hofmanova, J., Kozubik, A., Fedorocko, P. (2008), Mechanisms involved in the cell cycle and apoptosis of HT-29 cells pre-treated with MK-886 prior to photodynamic therapy with hypericin, JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 93, 108-118 [AIS=0.539, IF=1.871]
• Trnkova, L., Zerzankova, L., Dycka, F., Mikelova, R., Jelen, F. (2008), Study of copper and purine-copper complexes on modified carbon electrodes by cyclic and elimination voltammetry, SENSORS 8, 429-444 [AIS=0.45, IF=1.82]
• Dvorakova, J., Hruba, A., Velebny, V., Kubala, L. (2008), Isolation and characterization of mesenchymal stem cell population entrapped in bone marrow collection sets, CELL BIOLOGY INTERNATIONAL 32, 1116-1125 [AIS=0.52, IF=1.8]
• Peska, V., Sykorova, E., Fajkus, J. (2008), Two faces of Solanaceae telomeres: a comparison between Nicotiana and Cestrum telomeres and telomere-binding proteins, CYTOGENETIC AND GENOME RESEARCH 122, 380-387 [AIS=0.672, IF=1.729]
• Rezacova, M., Cap, J., Vokurkova, D., Lukasova, E., Vavrova, J., Cerman, J., Masin, V., Mazankova, N. (2008), Effect of somatostatin on repair of ionizing radiation-induced DNA damage in pituitary adenoma cells GH3, PHYSIOLOGICAL RESEARCH 57, 225-235 [AIS=0.41, IF=1.43]
• Kunicka, Z., Mucha, I., Fajkus, J. (2008), Telomerase Activity in Head and Neck Cancer, ANTICANCER RESEARCH 28, 3125-3129 [AIS=0.361, IF=1.428]
• Vilasova, Z., Rezacova, M., Vavrova, J., Tichy, A., Vokurkova, D., Zoelzer, F., Rehakova, Z., Osterreicher, J., Lukasova, E. (2008), Changes in phosphorylation of histone H2A.X and p53 in response of peripheral blood lymphocytes to gamma irradiation, ACTA BIOCHIMICA POLONICA 55, 381-390 [AIS=0.428, IF=1.262]
• Gorinstein, S., Lojek, A., Ciz, M., Pawelzik, E., Delgado-Licon, E., Medina, OJ., Moreno, M., Salas, IA., Goshev, I. (2008), Comparison of composition and antioxidant capacity of some cereals and pseudocereals, INTERNATIONAL JOURNAL OF FOOD SCIENCE AND TECHNOLOGY 43, 629-637 [AIS=0.33, IF=1.172]
• Dvorakova, J., Velebny, V., Kubala, L. (2008), Hyaluronan influence on the onset of chondrogenic differentiation of mesenchymal stem cells, NEUROENDOCRINOLOGY LETTERS 29, 685-690 [AIS=0.241, IF=1.047]
• Macickova, T., Pecivova, J., Nosal, R., Lojek, A., Pekarova, M., Cupanikova, D. (2008), Inhibition of superoxide generation and myeloperoxidase release by carvedilol after receptor and nonreceptor stimulation of human neutrophils, NEUROENDOCRINOLOGY LETTERS 29, 790-793 [AIS=0.241, IF=1.047]
• Bryja, V., Schambony, A., Cajanek, L., Dominguez, I., Arenas, E., Schulte, G. (2008), beta-Arrestin and casein kinase 1/2 define distinct branches of non-canonical WNT signalling pathways, EMBO REPORTS 9, 1244-1250 [AIS=3.993, IF=6.907]
• Krejci, P., Salazar, L., Goodridge, HS., Kashiwada, TA., Schibler, MJ., Jelinkova, P., Thompson, LM., Wilcox, WR. (2008), STAT1 and STAT3 do not participate in FGF-mediated growth arrest in chondrocytes, JOURNAL OF CELL SCIENCE 121, 272-281 [AIS=3.246, IF=6.144]
• Sponer, J., Riley, KE., Hobza, P. (2008), Nature and magnitude of aromatic stacking of nucleic acid bases, PHYSICAL CHEMISTRY CHEMICAL PHYSICS 10, 2595-2610 [AIS=1.3, IF=4.12]
• Topinka, J., Marvanova, S., Vondracek, J., Sevastyanova, O., Novakova, Z., Krcmar, P., Pencikova, K., Machala, M. (2008), DNA adducts formation and induction of apoptosis in rat liver epithelial 'stem-like' cells exposed to carcinogenic polycyclic aromatic hydrocarbons, MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS 638, 122-132 [AIS=1.171, IF=3.556]
• Schrumpfova, PP., Kuchar, M., Palecek, J., Fajkus, J. (2008), Mapping of interaction domains of putative telomere-binding proteins AtTRB1 and AtPOT1b from Arabidopsis thaliana, FEBS LETTERS 582, 1400-1406 [AIS=1.299, IF=3.541]
• Mozgova, I., Schrumpfova, PP., Hofr, C., Fajkus, J. (2008), Functional characterization of domains in AtTRB1, a putative telomere-binding protein in Arabidopsis thaliana, PHYTOCHEMISTRY 69, 1814-1819 [AIS=0.85, IF=3.1]
• Ondrej, V., Lukasova, E., Krejci, J., Kozubek, S. (2008), Intranuclear trafficking of plasmid DNA is mediated by nuclear polymeric proteins lamins and actin, ACTA BIOCHIMICA POLONICA 55, 307-315 [AIS=0.428, IF=1.262]
• Holcakova, J., Ceskova, P., Hrstka, R., Muller, P., Dubska, L., Coates, PJ., Palecek, E., Vojtesek, B. (2008), The cell type-specific effect of TAp73 isoforms on the cell cycle and apoptosis, CELLULAR & MOLECULAR BIOLOGY LETTERS 13, 404-420 [AIS=0.459, IF=1.127]
• Zluvova, J., Janousek, B., Hobza, R., Mracek, J., Widmer, A., Vyskot, B (2008), Genus Silene (Caryophyllaceae) – evolutionary diversification and sex chromosome formation. , In: PLANT GENOME – BIODIVERSITY AND EVOLUTION, Vol. 1E – Phanerogam – Angiosperm, Ed. Sharma, A.K., Sharma A., Science Publishers, New Hampshire, USA, pp. 173-226 (ISBN 978-1-57808-507-1). [AIS=0, IF=0]

2007

• Mackay, FS., Woods, JA., Heringova, P., Kasparkova, J., Pizarro, AM., Moggach, SA., Parsons, S., Brabec, V., Sadler, PJ. (2007), A potent cytotoxic photoactivated platinum complex, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 104, 20743-20748 [AIS=4.86, IF=9.43]
• Vespa, L., Warrington, RT., Mokros, P., Siroky, J., Shippen, DE. (2007), ATM regulates the length of individual telomere tracts in Arabidopsis, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 104, 18145-18150 [AIS=4.86, IF=9.43]
• Schulte, G., Bryja, V. (2007), The Frizzled family of unconventional G-protein-coupled receptors, TRENDS IN PHARMACOLOGICAL SCIENCES 28, 518-525 [AIS=3.33, IF=9.06]
• Gallmeier, E., Hucl, T., Brody, JR., Dezentje, DA., Tahir, K., Kasparkova, J., Brabec, V., Bachman, KE., Kern, SE. (2007), High-throughput screening identifies novel agents eliciting hypersensitivity in Fanconi pathway-deficient cancer cells, CANCER RESEARCH 67, 2169-2177 [AIS=2.92, IF=7.543]
• Sefcikova, J., Krasovska, MV., Sponer, J., Walter, NG. (2007), The genomic HDV ribozyme utilizes a previously unnoticed U-turn motif to accomplish fast site-specific catalysis, NUCLEIC ACIDS RESEARCH 35, 1933-1946 [AIS=3, IF=7.48]
• Gajduskova, P., Snijders, AM., Kwek, S., Roydasgupta, R., Fridlyand, J., Tokuyasu, T., Pinkel, D., Albertson, DG. (2007), Genome position and gene amplification, GENOME BIOLOGY 8 [AIS=3.586, IF=6.626]
• Goetze, S., Mateos-Langerak, J., Gierman, HJ., de Leeuw, W., Giromus, O., Indemans, MHG., Koster, J., Ondrej, V., Versteeg, R., van Driel, R. (2007), The three-dimensional structure of human interphase chromosomes is related to the transcriptome map, MOLECULAR AND CELLULAR BIOLOGY 27, 4475-4487 [AIS=3.44, IF=6.06]
• Lim, KY., Kovarik, A., Matyasek, R., Chase, MW., Clarkson, JJ., Grandbastien, MA., Leitch, AR. (2007), Sequence of events leading to near-complete genome turnover in allopolyploid Nicotiana within five million years, NEW PHYTOLOGIST 175, 756-763 [AIS=2.07, IF=6.03]
• Brazdilova, P., Vrabel, M., Pohl, R., Pivonkova, H., Havran, L., Hocek, M., Fojta, M. (2007), Ferrocenylethynyl derivatives of nucleoside triphosphates: Synthesis, incorporation, electrochemistry, and bioanalytical applications, CHEMISTRY-A EUROPEAN JOURNAL 13, 9527-9533 [AIS=1.593, IF=5.382]
• Knipp, M., Karotki, AV., Chesnov, S., Natile, G., Sadler, PJ., Brabec, V., Vasak, M. (2007), Reaction of Zn(7)Metallothionein with cis- and trans-[Pt(N-donor)(2)Cl-2] anticancer complexes: trans-Pt-II complexes retain their N-donor ligands, JOURNAL OF MEDICINAL CHEMISTRY 50, 4075-4086 [AIS=1.285, IF=4.802]
• Melchart, M., Habtemariam, A., Novakova, O., Moggach, SA., Fabbiani, FPA., Parsons, S., Brabec, V., Sadler, PJ. (2007), Bifunctional amine-tethered Ruthenium(II) arene complexes form monofunctional adducts on DNA, INORGANIC CHEMISTRY 46, 8950-8962 [AIS=1.018, IF=4.657]
• Magennis, SW., Habtemariam, A., Novakova, O., Henry, JB., Meier, S., Parsons, S., Oswald, IDH., Brabec, V., Sadler, PJ. (2007), Dual triggering of DNA binding and fluorescence via photoactivation of a dinuclear ruthenium(II) arene complex, INORGANIC CHEMISTRY 46, 5059-5068 [AIS=1.018, IF=4.657]
• Perez, A., Marchan, I., Svozil, D., Sponer, J., Cheatham, TE., Laughton, CA., Orozco, M. (2007), Refinenement of the AMBER force field for nucleic acids: Improving the description of alpha/gamma conformers, BIOPHYSICAL JOURNAL 92, 3817-3829 [AIS=1.917, IF=4.39]
• Fojtova, M., Boudny, V., Kovarik, A., Lauerova, L., Adamkova, L., Souckova, K., Jarkovsky, J., Kovarik, J. (2007), Development of IFN-gamma resistance is associated with attenuation of SOCS genes induction and constitutive expression of SOCS 3 in melanoma cells, BRITISH JOURNAL OF CANCER 97, 231-237 [AIS=1.467, IF=4.346]
• Polanska, L., Vicankova, A., Novakova, M., Malbeck, J., Dobrev, PI., Brzobohaty, B., Vankova, R., Machackova, I. (2007), Altered cytokinin metabolism affects cytokinin, auxin, and abscisic acid contents in leaves and chloroplasts, and chloroplast ultrastructure in transgenic tobacco, JOURNAL OF EXPERIMENTAL BOTANY 58, 637-649 [AIS=1.466, IF=4.271]
• Varecha, M., Amrichova, J., Zimmermann, M., Ulman, V., Lukasova, E., Kozubek, M. (2007), Bioinformatic and image analyses of the cellular localization of the apoptotic proteins endonuclease G, AIF, and AMID during apoptosis in human cells, APOPTOSIS 12, 1155-1171 [AIS=1.206, IF=4.066]
• Zluvova, J., Georgiev, S., Janousek, B., Charlesworth, D., Vyskot, B., Negrutiu, L. (2007), Early events in the evolution of the Silene latifolia Y chromosome: Male specialization and recombination arrest, GENETICS 177, 375-386 [AIS=1.962, IF=3.889]
• Lim, KY., Matyasek, R., Kovarik, A., Leitch, A. (2007), Parental origin and genome evolution in the allopolyploid Iris versicolor, ANNALS OF BOTANY 100, 219-224 [AIS=1.208, IF=3.501]
• Masarik, M., Cahova, K., Kizek, R., Palecek, E., Fojta, M. (2007), Label-free voltammetric detection of single-nucleotide mismatches recognized by the protein MutS, ANALYTICAL AND BIOANALYTICAL CHEMISTRY 388, 259-270 [AIS=0.888, IF=3.48]
• Vokacova, Z., Sponer, J., Sponer, JE., Sychrovsky, V. (2007), Theoretical study of the scalar coupling constants across the noncovalent contacts in RNA base pairs: The cis- and trans-Watson-Crick/sugar edge base pair family, JOURNAL OF PHYSICAL CHEMISTRY B 111, 10813-10824 [AIS=1.396, IF=3.471]
• Fuentes-Cabrera, M., Sumpter, BG., Sponer, JE., Sponer, J., Petit, L., Wells, JC. (2007), Theoretical study on the structure, stability, and electronic properties of the guanine-Zn-cytosine base pair in M-DNA, JOURNAL OF PHYSICAL CHEMISTRY B 111, 870-879 [AIS=1.396, IF=3.471]
• Lopez, D., Pavelkova, M., Gallova, L., Simonetti, P., Gardana, C., Lojek, A., Loaiza, R., Mltjavila, MT. (2007), Dealcoholized red and white wines decrease oxidative stress associated with inflammation in rats, BRITISH JOURNAL OF NUTRITION 98, 611-619 [AIS=0.964, IF=3.446]
• Myari, A., Hadjiliadis, N., Garoufis, A., Malina, J., Brabec, V. (2007), NMR analysis of duplex d(CGCGATCGCG)(2) modified by Lambda- and Delta-[Ru(bpy)(2)(m-GHK)]Cl-2 and DNA photocleavage study, JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 12, 279-292 [AIS=1.195, IF=3.415]
• Koutna, I., Krontorad, P., Svoboda, Z., Bartova, E., Kozubek, M., Kozubek, S. (2007), New insights into gene positional clustering and its properties supported by large-scale analysis of various differentiation pathways, GENOMICS 89, 81-88 [AIS=1.276, IF=3.327]
• Navratilova, J., Horvath, V., Kozubik, A., Lojek, A., Lipsick, J., Smarda, J. (2007), p53 arrests growth and induces differentiation of v-Myb-transformed monoblasts, DIFFERENTIATION 75, 592-604 [AIS=1.248, IF=3.311]
• Peberdy, JC., Malina, J., Khalid, S., Hannon, MJ., Rodger, A. (2007), Influence of surface shape on DNA binding of bimetallo helicates, JOURNAL OF INORGANIC BIOCHEMISTRY 101, 1937-1945 [AIS=0.909, IF=3.252]
• Meneni, SR., Shell, SM., Gao, L., Jurecka, P., Lee, W., Sponer, J., Zou, Y., Chiarelli, MP., Cho, BP. (2007), Spectroscopic and theoretical insights into sequence effects of aminofluorene-induced conformational heterogeneity and nucleotide excision repair, BIOCHEMISTRY 46, 11263-11278 [AIS=1.315, IF=3.226]
• Prochazka, L., Turanek, J., Tesarik, R., Knotigova, P., Polaskova, P., Andrysik, Z., Kozubik, A., Zak, F., Sova, P., Neuzil, J., Machala, M. (2007), Apoptosis and inhibition of gap-junctional intercellular communication induced by LA-12, a novel hydrophobic platinum(IV) complex, ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS 462, 54-61 [AIS=0.975, IF=3.046]
• Pejchalova, K., Krejci, P., Wilcox, WR. (2007), C-natriuretic peptide: An important regulator of cartilage, MOLECULAR GENETICS AND METABOLISM 92, 210-215 [AIS=0.9, IF=2.9]
• Mikes, J., Kleban, J., Sackova, V., Horvath, V., Jamborova, E., Vaculova, A., Kozubik, A., Hofmanova, J., Fedorocko, P. (2007), Necrosis predominates in the cell death of human colon adenocarcinoma HT-29 cells treated under variable conditions of photodynamic therapy with hypericin, PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES 6, 758-766 [AIS=0.81, IF=2.71]
• Mikelova, R., Trnkova, L., Jelen, F. (2007), Double elimination voltammetry of short oligonucleotides, ELECTROANALYSIS 19, 1807-1814 [AIS=0.615, IF=2.63]
• Sefcikova, J., Krasovska, MV., Spackova, N., Sponer, J., Walter, NG. (2007), Impact of an extruded nucleotide on cleavage activity and dynamic catalytic core conformation of the hepatitis delta virus ribozyme, BIOPOLYMERS 85, 392-406 [AIS=0.871, IF=2.605]
• McDowell, SE., Spackova, N., Sponer, J., Walter, NG. (2007), Molecular dynamics simulations of RNA: An in silico single molecule approach, BIOPOLYMERS 85, 169-184 [AIS=0.871, IF=2.605]
• Yu, QY., Hou, SB., Hobza, R., Feltus, FA., Wang, X., Jin, WW., Skelton, RL., Blas, A., Lemke, C., Saw, JH., Moore, PH., Alam, M., Jiang, JM., Paterson, AH., Vyskot, B., Ming, R. (2007), Chromosomal location and gene paucity of the male specific region on papaya Y chromosome, MOLECULAR GENETICS AND GENOMICS 278, 177-185 [AIS=0.99, IF=2.58]
• Petit, M., Lim, KY., Julio, E., Poncet, C., de Borne, FD., Kovarik, A., Leitch, AR., Grandbastien, MA., Mhiri, C. (2007), Differential impact of retrotransposon populations on the genome of allotetraploid tobacco (Nicotiana tabacum), MOLECULAR GENETICS AND GENOMICS 278, 1-15 [AIS=0.99, IF=2.58]
• Vondracek, J., Svihalkova-Sindlerova, L., Pencikova, K., Marvanova, S., Krcmar, P., Ciganek, M., Neca, J., Trosko, JE., Upham, B., Kozubik, A., Machala, M. (2007), Concentrations of methylated naphthalenes, anthracenes, and phenanthrenes occurring in Czech river sediments and their effects on toxic events associated with carcinogenesis in rat liver cell lines, ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY 26, 2308-2316 [AIS=0.721, IF=2.565]
• Vanhara, P., Bryja, V., Horvath, V., Kozubik, A., Hampl, A., Smarda, J. (2007), c-Jun induces apoptosis of starved BM2 monoblasts by activating cyclin A-CDK2, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 353, 92-97 [AIS=0.905, IF=2.548]
• Pavlik, M., Vacek, J., Klejdus, B., Kuban, V. (2007), Hypericin and hyperforin production in St. John's wort in vitro culture: Influence of saccharose, polyethylene glycol, methyl jasmonate, and Agrobacterium tumefaciens, JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 55, 6147-6153 [AIS=0.669, IF=2.469]
• Benes, P., Maceckova, V., Zatloukalova, J., Kovarova, L., Smardova, J., Smarda, J. (2007), Retinoic acid enhances differentiation of v-myb-transformed monoblasts induced by okadaic acid, LEUKEMIA RESEARCH 31, 1421-1431 [AIS=0.663, IF=2.358]
• Kleban, J., Mikes, J., Szilardiova, B., Koval, J., Sackova, V., Solar, P., Horvath, V., Hofmanova, J., Kozubik, A., Fedorocko, P. (2007), Modulation of hypericin photodynamic therapy by pretreatment with 12 various inhibitors of arachidonic acid metabolism in colon adenocarcinoma HT-29 cells, PHOTOCHEMISTRY AND PHOTOBIOLOGY 83, 1174-1185 [AIS=0.71, IF=2.25]
• Avranas, A., Kourtidou, S., Vetterl, V. (2007), Adsorption of the oligonucleotides A10, A25, A50 and A80 at the mercury/electrolyte interface, COLLOIDS AND SURFACES A-PHYSICOCHEMICAL AND ENGINEERING ASPECTS 295, 178-184 [AIS=0.575, IF=1.988]
• Vavrova, J., Janovska, S., Rezacova, M., Hernychova, L., Ticha, Z., Vokurkova, D., Zaskodova, D., Lukasova, E. (2007), Proteomic analysis of MOLT-4 cells treated by valproic acid, MOLECULAR AND CELLULAR BIOCHEMISTRY 303, 53-61 [AIS=0.6, IF=1.9]
• Pecivova, J., Macickova, T., Lojek, A., Gallova, L., Ciz, M., Nosal, R., Holomanova, D. (2007), In vitro effect of carvedilol on professional phagocytes, PHARMACOLOGY 79, 86-92 [AIS=0.41, IF=1.83]
• Lamkova, K., Simkova, A., Palikova, M., Jurajda, P., Lojek, A. (2007), Seasonal changes of immunocompetence and parasitism in chub (Leuciscus cephalus), a freshwater cyprinid fish, PARASITOLOGY RESEARCH 101, 775-789 [AIS=0.362, IF=1.721]
• Solar, P., Horvath, V., Kleban, J., Koval, J., Solarova, Z., Kozubik, A., Fedorocko, P. (2007), Hsp90 inhibitor Geldanamycin increases the sensitivity of resistant ovarian adenocarcinoma cell line A2780cis to cisplatin, NEOPLASMA 54, 127-130 [AIS=0.275, IF=1.192]
• Pachernik, J., Horvath, V., Kubala, L., Dvorak, P., Kozubik, A., Hampl, A. (2007), Neural differentiation potentiated by the leukaemia inhibitory factor through STAT3 signalling in mouse embryonal carcinoma cells, FOLIA BIOLOGICA 53, 157-163 [AIS=0.295, IF=0.924]
• Pavlik, M., Vacek, J., Klejdus, B., Kuban, V. (2007), High performance liquid chromatographic study of influence of saccharose and poly(ethylene glycol) on production of hypericin and hyperforin by Hypericum perforatum L., CHEMICKE LISTY 101, 556-562 [AIS=0.083, IF=0.717]
• Kovarikova, V., Docekalova, H., Docekal, B., Podborska, M. (2007), Use of the diffusive gradients in thin films technique (DGT) with various diffusive gels for characterization of sewage sludge-contaminated soils, ANALYTICAL AND BIOANALYTICAL CHEMISTRY 389, 2303-2311 [AIS=0.888, IF=3.48]
• Krejci, P., Pejchalova, K., Wilcox, WR. (2007), Simple, mammalian cell-based assay for identification of inhibitors of the Erk MAP kinase pathway, INVESTIGATIONAL NEW DRUGS 25, 391-395 [AIS=0.733, IF=3.072]
• Vrabel, M., Hocek, M., Havran, L., Fojta, M., Votruba, I., Klepetarova, B., Pohl, R., Rulisek, L., Zendlova, L., Hobza, P., Shih, IH., Mabery, E., Mackman, R. (2007), Purines bearing phenanthroline or bipyridine ligands and their Ru-II complexes in position 8 as model compounds for electrochemical DNA labeling - Synthesis, crystal structure, electrochemistry, quantum chemical calculations, cytostatic and antiviral activity, EUROPEAN JOURNAL OF INORGANIC CHEMISTRY, 1752-1769 [AIS=0.697, IF=2.941]

2006

• Rhodes, MM., Reblova, K., Sponer, J., Walter, NG. (2006), Trapped water molecules are essential to structural dynamics and function of a ribozyme, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 103, 13380-13385 [AIS=4.86, IF=9.43]
• Sychrovsky, V., Sponer, J., Trantirek, L., Schneider, B. (2006), Indirect NMR spin-spin coupling constants (3)J(P, C) and (2)J(P, H) across the P-O center dot center dot center dot H-C link can be used for structure determination of nucleic acids, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 128, 6823-6828 [AIS=2.701, IF=8.58]
• Mokdad, A., Krasovska, MV., Sponer, J., Leontis, NB. (2006), Structural and evolutionary classification of G/U wobble basepairs in the ribosome, NUCLEIC ACIDS RESEARCH 34, 1326-1341 [AIS=3, IF=7.48]
• Lim, KY., Kovarik, A., Matyasek, R., Chase, MW., Knapp, S., McCarthy, E., Clarkson, JJ., Leitch, AR. (2006), Comparative genomics and repetitive sequence divergence in the species of diploid Nicotiana section Alatae, PLANT JOURNAL 48, 907-919 [AIS=2.83, IF=6.95]
• Najajreh, Y., Khazanov, E., Jawbry, S., Ardeli-Tzaraf, Y., Perez, JM., Kasparkova, J., Brabec, V., Barenholz, Y., Gibson, D. (2006), Cationic nonsymmetric transplatinum complexes with piperidinopiperidine ligands. Preparation, characterization, in vitro cytotoxicity, in vivo toxicity, and anticancer efficacy studies, JOURNAL OF MEDICINAL CHEMISTRY 49, 4665-4673 [AIS=1.285, IF=4.802]
• Najajreh, Y., Ardeli-Tzaraf, Y., Kasparkova, J., Heringova, P., Prilutski, D., Balter, L., Jawbry, S., Khazanov, E., Perez, JM., Barenholz, Y., Brabec, V., Gibson, D. (2006), Interactions of platinum complexes containing cationic, bicyclic, nonplanar piperidinopiperidine ligands with biological nucleophiles, JOURNAL OF MEDICINAL CHEMISTRY 49, 4674-4683 [AIS=1.285, IF=4.802]
• Bodo, J., Hunakova, L., Kvasnicka, P., Jakubikova, J., Duraj, J., Kasparkova, J., Sedlak, J. (2006), Sensitisation for cisplatin-induced apoptosis by isothiocyanate E-4IB leads to signalling pathways alterations, BRITISH JOURNAL OF CANCER 95, 1348-1353 [AIS=1.467, IF=4.346]
• Stika, J., Vondracek, J., Hofmanova, J., Simek, V., Kozubik, A. (2006), MK-886 enhances tumour necrosis factor-alpha-induced differentiation and apoptosis, CANCER LETTERS 237, 263-271 [AIS=1.005, IF=3.741]
• Vondracek, J., Svihalkova-Sindlerova, L., Pencikova, K., Krcmar, P., Andrysik, Z., Chramostova, K., Marvanova, S., Valovicova, Z., Kozubik, A., Gabelova, A., Machala, M. (2006), 7H-Dibenzo[c,g]carbazole and 5,9-dimethyldibenzo[c,g]carbazole exert multiple toxic events contributing to tumor promotion in rat liver epithelial 'stem-like' cells, MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS 596, 43-56 [AIS=1.17, IF=3.56]
• Sychrovsky, V., Vokacova, Z., Sponer, J., Spackova, N., Schneider, B. (2006), Calculation of structural behavior of indirect NMR spin-spin couplings in the backbone of nucleic acids, JOURNAL OF PHYSICAL CHEMISTRY B 110, 22894-22902 [AIS=1.396, IF=3.471]
• Vacek, J., Klejdus, B., Petrlova, J., Lojkova, L., Kuban, V. (2006), A hydrophilic interaction chromatography coupled to a mass spectrometry for the determination of glutathione in plant somatic embryos, ANALYST 131, 1167-1174 [AIS=0.93, IF=3.272]
• Valik, M., Malina, J., Palivec, L., Foltynova, J., Tkadlecova, M., Urbanova, M., Brabec, V., Kral, V. (2006), Troger's base scaffold in racemic and chiral fashion as a spacer for bisdistamycin formation. Synthesis and DNA binding study, TETRAHEDRON 62, 8591-8600 [AIS=0.79, IF=3.22]
• Popova, EY., Claxton, DF., Lukasova, E., Bird, PI., Grigoryev, SA. (2006), Epigenetic heterochromatin markers distinguish terminally differentiated leukocytes from incompletely differentiated leukemia cells in human blood, EXPERIMENTAL HEMATOLOGY 34, 453-462 [AIS=1.121, IF=3.106]
• Pavelka, M., Simanek, M., Sponer, J., Burda, JV. (2006), Copper cation interactions with biologically essential types of ligands: A computational DFT study, JOURNAL OF PHYSICAL CHEMISTRY A 110, 4795-4809 [AIS=0.882, IF=2.899]
• Sykorova, E., Fajkus, J., Meznikova, M., Lim, KY., Neplechova, K., Blattner, FR., Chase, MW., Leitch, AR. (2006), Minisatellite telomeres occur in the family Alliaceae but are lost in Allium, AMERICAN JOURNAL OF BOTANY 93, 814-823 [AIS=1.339, IF=2.684]
• Dorcak, V., Sestakova, I. (2006), Electrochemical behavior of phytochelatins and related peptides at the hanging mercury drop electrode in the presence of cobalt(II) ions, BIOELECTROCHEMISTRY 68, 14-21 [AIS=0.646, IF=2.652]
• Trnkova, L., Jelen, F., Postbieglova, I. (2006), Application of elimination voltammetry to the resolution of adenine and cytosine signals in oligonucleotides II. Hetero-oligodeoxynucleotides with different sequences of adenine and cytosine nucleotides, ELECTROANALYSIS 18, 662-669 [AIS=0.615, IF=2.63]
• Yosypchuk, B., Barek, J., Fojta, M. (2006), Carbon powder based films on traditional solid electrodes as an alternative to disposable electrodes, ELECTROANALYSIS 18, 1126-1130 [AIS=0.615, IF=2.63]
• Yosypchuk, B., Fojta, M., Havran, L., Heyrovsky, M., Palecek, E. (2006), Voltammetric behavior of osmium-labeled DNA at mercury meniscus-modified solid amalgam electrodes. Detecting DNA hybridization, ELECTROANALYSIS 18, 186-194 [AIS=0.615, IF=2.63]
• Klejdus, B., Moravcova, J., Lojkova, L., Vacek, J., Kuban, V. (2006), Solid-phase extraction of 4(5)-methylimidazole (4Mel) and 2-acetyl-4(5)-(1,2,3,4-tetrahydroxybutyl)-imidazole(THI) from foods and beverages with subsequent liquid chromatographic-electrospray mass spectrometric quantification, JOURNAL OF SEPARATION SCIENCE 29, 378-384 [AIS=0.676, IF=2.551]
• Brazda, V., Muller, P., Brozkova, K., Vojtesek, B. (2006), Restoring wild-type conformation and DNA-binding activity of mutant p53 is insufficient for restoration of transcriptional activity, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 351, 499-506 [AIS=0.905, IF=2.548]
• Fajkus, J. (2006), Detection of telomerase activity by the.TRAP assay and its variants and alternatives, CLINICA CHIMICA ACTA 371, 25-31 [AIS=0.681, IF=2.535]
• de Oliveira, FMB., da Silva, ICD., Rumjanek, FD., Dias-Neto, E., Guimaraes, PEM., Verjovski-Almeida, S., Stros, M., Fantappie, MR. (2006), Cloning the genes and DNA binding properties of High Mobility Group B1 (HMGB1) proteins from the human blood flukes Schistosoma mansoni and Schistosoma japonicum, GENE 377, 33-45 [AIS=0.973, IF=2.416]
• Mazura, P., Fohlerova, R., Brzobohaty, B., Kiran, NS., Janda, L. (2006), A new, sensitive method for enzyme kinetic studies of scarce glucosides, JOURNAL OF BIOCHEMICAL AND BIOPHYSICAL METHODS 68, 55-63 [AIS=0.592, IF=2.332]
• Zelnickova, P., Kovaru, H., Pesak, S., Lojek, A., Matalova, E., Ondracek, J., Kovaru, F. (2006), Postnatal functional maturation of blood phagocytes in pig, VETERINARY IMMUNOLOGY AND IMMUNOPATHOLOGY 113, 383-391 [AIS=0.46, IF=1.96]
• Frankova, J., Kubala, L., Velebny, V., Ciz, M., Lojek, A. (2006), The effect of hyaluronan combined with KI3 complex (Hyiodine wound dressing) on keratinocytes and immune cells, JOURNAL OF MATERIALS SCIENCE-MATERIALS IN MEDICINE 17, 891-898 [AIS=0.559, IF=1.955]
• Kleban, J., Szilardiova, B., Mikes, J., Horvath, V., Sackova, V., Brezani, P., Hofmanova, J., Kozubik, A., Fedorocko, P. (2006), Pre-treatment of HT-29 cells with 5-LOX inhibitor (MK-886) induces changes in cell cycle and increases apoptosis after photodynamic therapy with hypericin, JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 84, 79-88 [AIS=0.539, IF=1.871]
• Svoboda, M., Lojek, A., Polaskova, J., Ficek, R., Hiemer, J., Drabek, J. (2006), Effect of an acute iron overdose on PMN cells chemiluminescence and indices of inner environment in a swine model, ACTA VETERINARIA BRNO 75, 523-532 [AIS=0.103, IF=0.403]
• Jurecka, P., Sponer, J., Cerny, J., Hobza, P. (2006), Benchmark database of accurate (MP2 and CCSD(T) complete basis set limit) interaction energies of small model complexes, DNA base pairs, and amino acid pairs, PHYSICAL CHEMISTRY CHEMICAL PHYSICS 8, 1985-1993 [AIS=1.3, IF=4.12]
• Hobza, R., Vyskot, B. (2006), Sex chromosomes in plants. , In: FLORICULTURE, ORNAMENTAL AND PLANT BIOTECHNOLOGY. Advances and Topical Issues, Volume I, da Silva, J.A.T. (Ed.), Global Science Books, Ltd., London, 224-235 (ISSN: 1749-0294). [AIS=0, IF=0]

2005

• Nicolas, M., Marais, G., Hykelova, V., Janousek, B., Laporte, V., Vyskot, B., Mouchiroud, D., Negrutiu, I., Charlesworth, D., Moneger, F. (2005), A gradual process of recombination restriction in the evolutionary history of the sex chromosomes in dioecious plants, PLOS BIOLOGY 3, 47-56 [AIS=8.62, IF=12.92]
• Najajreh, Y., Prilutski, D., Ardeli-Tzaraf, Y., Perez, JM., Khazanov, E., Barenholz, Y., Kasparkova, J., Brabec, V., Gibson, D. (2005), Structure and unique interactions with DNA of a cationic trans-platinum complex with the nonplanar bicyclic piperidinopiperidine ligand, ANGEWANDTE CHEMIE-INTERNATIONAL EDITION 44, 2885-2887 [AIS=3.296, IF=11.829]
• Sychrovsky, V., Muller, N., Schneider, B., Smrecki, V., Spirko, V., Sponer, J., Trantirek, L. (2005), Sugar pucker modulates the cross-correlated relaxation rates across the glycosidic bond in DNA, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 127, 14663-14667 [AIS=2.701, IF=8.58]
• Bryja, V., Cajanek, L., Pachernik, J., Hall, AC., Horvath, V., Dvorak, P., Hampl, A. (2005), Abnormal development of mouse embryoid bodies lacking p27(Kip1) cell cycle regulator, STEM CELLS 23, 965-974 [AIS=2.69, IF=7.75]
• Novakova, O., Kasparkova, J., Bursova, V., Hofr, C., Vojtiskova, M., Chen, HM., Sadler, PJ., Brabec, V. (2005), Conformation of DNA modified by monofunctional Ru(II) arene complexes: Recognition by DNA binding proteins and repair. Relationship to cytotoxicity, CHEMISTRY & BIOLOGY 12, 121-129 [AIS=2.536, IF=6.523]
• Clarkson, JJ., Lim, KY., Kovarik, A., Chase, MW., Knapp, S., Leitch, AR. (2005), Long-term genome diploidization in allopolyploid Nicotiana section Repandae (Solanaceae), NEW PHYTOLOGIST 168, 241-252 [AIS=2.07, IF=6.03]
• Boon, EMJ., Kovarikova, M., Derksen, PWB., van der Neut, R. (2005), MET signalling in primary colon epithelial cells leads to increased transformation irrespective of aberrant Wnt signalling, BRITISH JOURNAL OF CANCER 92, 1078-1083 [AIS=1.467, IF=4.346]
• Lim, KY., Werlemark, G., Matyasek, R., Bringloe, JB., Sieber, V., El Mokadem, H., Meynet, J., Hemming, J., Leitch, AR., Roberts, AV. (2005), Evolutionary implications of permanent odd polyploidy in the stable sexual, pentaploid of Rosa canina L, HEREDITY 94, 501-506 [AIS=1.586, IF=4.122]
• Krasovska, MV., Sefcikova, J., Spackova, N., Sponer, J., Walter, NG. (2005), Structural dynamics of precursor and product of the RNA enzyme from the hepatitis delta virus as revealed by molecular dynamics simulations, JOURNAL OF MOLECULAR BIOLOGY 351, 731-748 [AIS=2.051, IF=3.871]
• Tacev, T., Vacek, A., Ptackova, B., Strnad, V. (2005), Hypoxic versus normoxic external-beam irradiation of cervical carcinoma combined with californium-252 neutron brachytherapy - Comparative treatment results of a 5-year randomized study, STRAHLENTHERAPIE UND ONKOLOGIE 181, 273-284 [AIS=0.382, IF=3.776]
• Kizek, R., Masarik, M., Kramer, KJ., Potesil, D., Bailey, M., Howard, JA., Klejdus, B., Mikelova, R., Adam, V., Trnkova, L., Jelen, F. (2005), An analysis of avidin, biotin and their interaction at attomole levels by voltammetric and chromatographic techniques, ANALYTICAL AND BIOANALYTICAL CHEMISTRY 381, 1167-1178 [AIS=0.888, IF=3.48]
• Pliskova, M., Vondracek, J., Kren, V., Gazak, R., Sedmera, P., Walterova, D., Psotova, J., Simanek, V., Machala, M. (2005), Effects of silymarin flavonolignans and synthetic silybin derivatives on estrogen and aryl hydrocarbon receptor activation, TOXICOLOGY 215, 80-89 [AIS=0.8, IF=3.24]
• Fajkus, J., Sykorova, E., Leitch, AR. (2005), Telomeres in evolution and evolution of telomeres, CHROMOSOME RESEARCH 13, 469-479 [AIS=1.298, IF=3.23]
• Mitchell, EP., Sabin, C., Snajdrova, L., Pokorna, M., Perret, S., Gautier, C., Hofr, C., Gilboa-Garber, N., Koca, J., Wimmerova, M., Imberty, A. (2005), High affinity fucose binding of Pseudomonas aeruginosa lectin PA-IIL: 1.0 angstrom resolution crystal structure of the complex combined with thermodynamics and computational chemistry approaches, PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS 58, 735-746 [AIS=1.285, IF=3.085]
• Adam, V., Petrlova, J., Potesil, D., Zehnalek, J., Sures, B., Trnkova, L., Jelen, F., Kizek, R. (2005), Study of metallothionein modified electrode surface behavior in the presence of heavy metal ions-biosensor, ELECTROANALYSIS 17, 1649-1657 [AIS=0.615, IF=2.63]
• Malina, J., Voitiskova, M., Brabec, V., Diakos, CI., Hambley, TW. (2005), DNA adducts of the enantiomers of the Pt(II) complexes of the ahaz ligand (ahaz=3-aminohexahydroazepine) and recognition of these adducts by HMG domain proteins, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 332, 1034-1041 [AIS=0.905, IF=2.548]
• Barone, F., Lankas, F., Spackova, N., Sponer, J., Karran, P., Bignami, M., Mazzei, F. (2005), Structural and dynamic effects of single 7-hydro-8-oxoguanine bases located in a frameshift target DNA sequence, BIOPHYSICAL CHEMISTRY 118, 31-41 [AIS=0.685, IF=2.276]
• Kovarik, A., Fojtova, M., Boudny, V., Adamkova, L., Lauerova, L., Kovarik, J. (2005), Interferon-gamma, but not interferon-alpha, induces SOCS 3 expression in human melanoma cell lines, MELANOMA RESEARCH 15, 481-488 [AIS=0.635, IF=2.061]
• Trnkova, L., Jelen, F., Petrlova, J., Adam, V., Potesil, D., Kizek, R. (2005), Elimination voltammetry with linear scan as a new detection method for DNA sensors, SENSORS 5, 448-464 [AIS=0.45, IF=1.82]
• Adam, V., Zehnalek, J., Petrlova, J., Potesil, D., Sures, B., Trnkova, L., Jelen, F., Vitecek, J., Kizek, R. (2005), Phytochelatin modified electrode surface as a sensitive heavy-metal ion biosensor, SENSORS 5, 70-84 [AIS=0.45, IF=1.82]
• Lim, KY., Matyasek, R., Kovarik, A., Fulnecek, J., Leitch, AR. (2005), Molecular cytogenetics and tandem repeat sequence evolution in the allopolyploid Nicotiana rustica compared with diploid progenitors N-paniculata and N-undulata, CYTOGENETIC AND GENOME RESEARCH 109, 298-309 [AIS=0.672, IF=1.729]
• Necas, M., Dostal, J., Kejnovska, I., Vorlickova, M., Slavik, J. (2005), Molecular and crystal structures of (+)-homochelidonine, (+)-chelamine, and (-)-norchelidonine, JOURNAL OF MOLECULAR STRUCTURE 734, 1-6 [AIS=0.368, IF=1.551]
• Pachernik, J., Bryja, V., Esner, M., Kubala, L., Dvorak, P., Hampl, A. (2005), Neural differentiation of pluripotent mouse embryonal carcinoma cells by retinoic acid: Inhibitory effect of serum, PHYSIOLOGICAL RESEARCH 54, 115-122 [AIS=0.41, IF=1.43]
• Matsunaga, S., Lebel-Hardenack, S., Kejnovsky, E., Vyskot, B., Grant, SR., Kawano, S. (2005), An anther- and petal-specific gene SlMF1 is a multicopy gene with homologous sequences on sex chromosomes, GENES & GENETIC SYSTEMS 80, 395-401 [AIS=0.507, IF=1.391]
• Nosal, R., Jancinova, V., Ciz, M., Drabikova, K., Lojek, A., Fabryova, V. (2005), Inhibition of chemiluminescence by carvedilol in the cell-free system, whole human blood and blood cells, SCANDINAVIAN JOURNAL OF CLINICAL & LABORATORY INVESTIGATION 65, 55-64 [AIS=0.355, IF=1.38]
• Bunkova, R., Marova, I., Pokorna, Z., Lojek, A. (2005), Analysis of plant extracts antimutagenicity using the Ames test and the cytogenetic analysis of peripheral blood lymphocytes, FOOD SCIENCE AND TECHNOLOGY INTERNATIONAL 11, 107-112 [AIS=0.243, IF=0.467]
• Doubek, J., Volny, T., Lojek, A., Knotkova, Z., Kotrbacek, V., Scheer, P., Holesovska, Z. (2005), Effect of stilbene resveratrol on haematological indices of rats, ACTA VETERINARIA BRNO 74, 205-208 [AIS=0.103, IF=0.403]
• Samalova, M., Brzobohaty, B., Moore, I. (2005), pOp6/LhGR: a stringently regulated and highly responsive dexamethasone-inducible gene expression system for tobacco, PLANT JOURNAL 41, 919-935 [AIS=2.829, IF=6.946]
• Perez, A., Sponer, J., Jurecka, P., Hobza, P., Luque, FJ., Orozco, M. (2005), Are the hydrogen bonds of RNA (A center dot U) stronger than those of DNA (A center dot T)? A quantum mechanics study, CHEMISTRY-A EUROPEAN JOURNAL 11, 5062-5066 [AIS=1.593, IF=5.382]

2004

• Puizina, J., Siroky, J., Mokros, P., Schweizer, D., Riha, K. (2004), Mre11 deficiency in Arabidopsis is associated with chromosomal instability in somatic cells and Spo11-dependent genome fragmentation during meiosis, PLANT CELL 16, 1968-1978 [AIS=4.53, IF=9.29]
• Lankas, F., Sponer, J., Langowski, J., Cheatham, TE. (2004), DNA deformability at the base pair level, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 126, 4124-4125 [AIS=2.701, IF=8.58]
• Bryja, V., Pachernik, J., Soucek, K., Horvath, V., Dvorak, P., Hampl, A. (2004), Increased apoptosis in differentiating p27-deficient mouse embryonic stem cells, CELLULAR AND MOLECULAR LIFE SCIENCES 61, 1384-1400 [AIS=2.34, IF=6.09]
• Pospisilova, S., Brazda, V., Kucharikova, K., Luciani, MG., Hupp, TR., Skladal, P., Palecek, E., Vojtesek, B. (2004), Activation of the DNA-binding ability of latent p53 protein by protein kinase C is abolished by protein kinase CK2, BIOCHEMICAL JOURNAL 378, 939-947 [AIS=1.787, IF=5.155]
• Zak, F., Turanek, J., Kroutil, A., Sova, P., Mistr, A., Poulova, A., Mikolin, P., Zak, Z., Kasna, A., Zaluska, D., Neca, J., Sindlerova, L., Kozubik, A. (2004), Platinum(IV) complex with adamantylamine as nonleaving amine group: Synthesis, characterization, and in vitro antitumor activity against a panel of cisplatin-resistant cancer cell lines, JOURNAL OF MEDICINAL CHEMISTRY 47, 761-763 [AIS=1.285, IF=4.802]
• Reblova, K., Spackova, N., Koca, J., Leontis, NB., Sponer, J. (2004), Long-residency hydration, cation binding, and dynamics of loop E/helix IV rRNA-L25 protein complex, BIOPHYSICAL JOURNAL 87, 3397-3412 [AIS=1.917, IF=4.39]
• Gasowski, B., Leontowicz, M., Leontowicz, H., Katrich, E., Lojek, A., Ciz, M., Trakhtenberg, S., Gorinstein, S. (2004), The influence of beer with different antioxidant potential on plasma lipids, plasma antioxidant capacity, and bile excretion of rats fed cholesterol-containing and cholesterol-free diets, JOURNAL OF NUTRITIONAL BIOCHEMISTRY 15, 527-533 [AIS=1.03, IF=4.288]
• Murad, L., Bielawski, JP., Matyasek, R., Kovarik, A., Nichols, RA., Leitch, AR., Lichtenstein, CP. (2004), The origin and evolution of geminivirus-related DNA sequences in Nicotiana, HEREDITY 92, 352-358 [AIS=1.586, IF=4.122]
• Sedo, O., Billova, S., Pena-Mendez, EM., Palecek, E., Havel, J. (2004), Derivatisation of peptides with osmium tetroxide, 2,2 '-bipyridine: capillary electrophoretic and MALDI-TOF mass spectrometric study, ANALYTICA CHIMICA ACTA 515, 261-269 [AIS=0.855, IF=3.757]
• Machala, M., Blaha, L., Lehmler, HJ., Pliskova, M., Majkova, Z., Kapplova, P., Sovadinova, I., Vondracek, J., Malmberg, T., Robertson, LW. (2004), Toxicity of hydroxylated and quinoid PCB metabolites: Inhibition of gap junctional intercellular communication and activation of aryl hydrocarbon and estrogen receptors in hepatic and mammary cells, CHEMICAL RESEARCH IN TOXICOLOGY 17, 340-347 [AIS=0.963, IF=3.74]
• Kuchar, M., Fajkus, J. (2004), Interactions of putative telomere-binding proteins in Arabidopsis thaliana: identification of functional TRF2 homolog in plants, FEBS LETTERS 578, 311-315 [AIS=1.299, IF=3.541]
• Kloster, M., Kostrhunova, H., Zaludova, R., Malina, J., Kasparkova, J., Brabec, V., Farrell, N. (2004), Trifunctional dinuclear platinum complexes as DNA-protein cross-linking agent, BIOCHEMISTRY 43, 7776-7786 [AIS=1.315, IF=3.226]
• Pires, JC., Lim, KY., Kovarik, A., Matyasek, R., Boyd, A., Leitch, AR., Leitch, IJ., Bennett, MD., Soltis, PS., Soltis, DE. (2004), Molecular cytogenetic analysis of recently evolved Tragopogon (Asteraceae) allopolyploids reveal a karyotype that is additive of the diploid progenitors, AMERICAN JOURNAL OF BOTANY 91, 1022-1035 [AIS=1.339, IF=2.684]
• Nosek, J., Novotna, M., Hlavatovicova, Z., Ussery, DW., Fajkus, J., Tomaska, L. (2004), Complete DNA sequence of the linear mitochondrial genome of the pathogenic yeast Candida parapsilosis, MOLECULAR GENETICS AND GENOMICS 272, 173-180 [AIS=0.99, IF=2.58]
• Vondracek, J., Chramostova, K., Pliskova, M., Blaha, L., Brack, W., Kozubik, A., Machala, M. (2004), Induction of aryl hydrocarbon receptor-mediated and estrogen receptor-mediated activities, and modulation of cell proliferation by dinaphthofurans, ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY 23, 2214-2220 [AIS=0.721, IF=2.565]
• Turanek, J., Kasna, A., Zaluska, D., Neca, J., Kvardova, V., Knotigova, P., Horvath, V., Sindlerova, L., Kozubik, A., Sova, P., Kroutil, A., Zak, FE., Mistr, A. (2004), New platinum(IV) complex with adamantylamine ligand as a promising anti-cancer drug: comparison of in vitro cytotoxic potential towards A2780/cisR cisplatin-resistant cell line within homologous series of platinum(IV) complexes, ANTI-CANCER DRUGS 15, 537-543 [AIS=0.576, IF=2.23]
• Kozubek, M., Matula, P., Matula, P., Kozubek, S. (2004), Automated acquisition and processing of multidimensional image data in confocal in vivo microscopy, MICROSCOPY RESEARCH AND TECHNIQUE 64, 164-175 [AIS=0.66, IF=1.85]
• Matsunaga, S., Uchida, W., Kejnovsky, E., Isono, E., Moneger, F., Vyskot, B., Kawano, S. (2004), Characterization of two SEPALLATA MADS-box genes from the dioecious plant Silene latifolia, SEXUAL PLANT REPRODUCTION 17, 189-193 [AIS=0.58, IF=1.6]
• Pecivova, J., Macickova, T., Ciz, M., Nosal, R., Lojek, A. (2004), Effect of stobadine on opsonized zymosan stimulated generation of reactive oxygen species in human blood cells, PHYSIOLOGICAL RESEARCH 53, 97-102 [AIS=0.41, IF=1.43]
• Fadrna, R., Yosypchuk, B., Fojta, M., Navratil, T., Novotny, L. (2004), Voltammetric determination of adenine, guanine, and DNA using liquid mercury free polished silver solid amalgam electrode, ANALYTICAL LETTERS 37, 399-413 [AIS=0.264, IF=1.317]
• Hyrsl, P., Ciz, M., Kubala, L., Lojek, A. (2004), Silkworm (Bombyx mori) hemocytes do not produce reactive oxygen metabolites as a part of defense mechanisms, FOLIA MICROBIOLOGICA 49, 315-319 [AIS=0.164, IF=0.978]
• Kerman, K., Ozkan, D., Kara, P., Karadeniz, H., Ozkan, Z., Erdem, A., Jelen, F., Ozsoz, M. (2004), Electrochemical detection of specific DNA sequences from PCR amplicons on carbon and mercury electrodes using Meldola's Blue as an intercalator, TURKISH JOURNAL OF CHEMISTRY 28, 523-533 [AIS=0.23, IF=0.758]
• Sychrovsky, V., Sponer, J., Hobza, P. (2004), Theoretical calculation of the NMR spin-spin coupling constants and the NMR shifts allow distinguishability between the specific direct and the water-mediated binding of a divalent metal cation to guanine, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 126, 663-672 [AIS=2.701, IF=8.58]
• Jurecka, P., Sponer, J., Hobza, P. (2004), Potential energy surface of the cytosine dimer: MP2 complete basis set limit interaction energies, CCSD(T) correction term, and comparison with the AMBER force field, JOURNAL OF PHYSICAL CHEMISTRY B 108, 5466-5471 [AIS=1.396, IF=3.471]
• Palikova, M., Navratil, S., Krejci, R., Sterba, F., Tichy, F., Kubala, L., Marsalek, B., Blaha, L. (2004), Outcomes of repeated exposure of the carp (Cyprinus carpio L.) to cyanobacteria extract, ACTA VETERINARIA BRNO 73, 259-265 [AIS=0.103, IF=0.403]

2003

• Benkova, E., Michniewicz, M., Sauer, M., Teichmann, T., Seifertova, D., Jurgens, G., Friml, J. (2003), Local, efflux-dependent auxin gradients as a common module for plant organ formation, CELL 115, 591-602 [AIS=20.15, IF=31.152]
• Matsunaga, S., Isono, E., Kejnovsky, E., Vyskot, B., Dolezel, J., Kawano, S., Charlesworth, D. (2003), Duplicative transfer of a MADS box gene to a plant Y chromosome, MOLECULAR BIOLOGY AND EVOLUTION 20, 1062-1069 [AIS=3.38, IF=9.87]
• Reblova, K., Spackova, N., Sponer, JE., Koca, J., Sponer, J. (2003), Molecular dynamics simulations of RNA kissing-loop motifs reveal structural dynamics and formation of cation-binding pockets, NUCLEIC ACIDS RESEARCH 31, 6942-6952 [AIS=3, IF=7.48]
• Sykorova, E., Lim, KY., Chase, MW., Knapp, S., Leitch, IJ., Leitch, AR., Fajkus, J. (2003), The absence of Arabidopsis-type telomeres in Cestrum and closely related genera Vestia and Sessea (Solanaceae): first evidence from eudicots, PLANT JOURNAL 34, 283-291 [AIS=2.83, IF=6.95]
• Zahradnickova, E., Soucek, K., Sevcikova, S., Smardova, J., Smarda, K. (2003), c-Fos but not v-Fos protein induces programmed cell death of v-myb-transformed monoblasts, CELLULAR AND MOLECULAR LIFE SCIENCES 60, 2736-2748 [AIS=2.34, IF=6.09]
• Sykorova, E., Lim, KY., Fajkus, J., Leitch, AR. (2003), The signature of the Cestrum genome suggests an evolutionary response to the loss of (TTTAGGG)(n) telomeres, CHROMOSOMA 112, 164-172 [AIS=2.272, IF=4.979]
• Machala, M., Blaha, L., Vondracek, J., Trosko, JE., Scott, J., Upham, BL. (2003), Inhibition of gap junctional intercellular communication by noncoplanar polychlorinated biphenyls: Inhibitory potencies and screening for potential mode(s) of action, TOXICOLOGICAL SCIENCES 76, 102-111 [AIS=1.27, IF=4.81]
• Lankas, F., Sponer, J., Langowski, J., Cheatham, TE. (2003), DNA basepair step deformability inferred from molecular dynamics simulations, BIOPHYSICAL JOURNAL 85, 2872-2883 [AIS=1.917, IF=4.39]
• Stefl, R., Cheatham, TE., Spackova, N., Fadrna, E., Berger, I., Koca, J., Sponer, J. (2003), Formation pathways of a guanine-quadruplex DNA revealed by molecular dynamics and thermodynamic analysis of the substates, BIOPHYSICAL JOURNAL 85, 1787-1804 [AIS=1.917, IF=4.39]
• Gorinstein, S., Martin-Belloso, O., Katrich, E., Lojek, A., Ciz, M., Gligelmo-Miguel, N., Haruenkit, R., Park, YS., Jung, ST., Trakhtenberg, S. (2003), Comparison of the contents of the main biochemical compounds and the antioxidant activity of some Spanish olive oils as determined by four different radical scavenging tests, JOURNAL OF NUTRITIONAL BIOCHEMISTRY 14, 154-159 [AIS=1.03, IF=4.288]
• Matyasek, R., Lim, KY., Kovarik, A., Leitch, AR. (2003), Ribosomal DNA evolution and gene conversion in Nicotiana rustica, HEREDITY 91, 268-275 [AIS=1.586, IF=4.122]
• Kunz, C., Narangajavana, J., Jakowitsch, J., Park, YD., Delon, TR., Kovarik, A., Koukalova, B., van der Winden, J., Moscone, E., Aufsatz, W., Mette, MF., Matzke, M., Matzke, AJM. (2003), Studies on the effects of a flanking repetitive sequence on the expression of single-copy transgenes in Nicotiana sylvestris and in N-sylvestris-N-tomentosiformis hybrids, PLANT MOLECULAR BIOLOGY 52, 203-215 [AIS=1.43, IF=3.98]
• Moore, RC., Kozyreva, O., Lebel-Hardenack, S., Siroky, J., Hobza, R., Vyskot, B., Grant, SR. (2003), Genetic and functional analysis of DD44, a sex-linked gene from the dioecious plant Silene latifolia, provides clues to early events in sex chromosome evolution, GENETICS 163, 321-334 [AIS=1.962, IF=3.889]
• Lexa, M., Genkov, T., Malbeck, J., Machackova, I., Brzobohaty, B. (2003), Dynamics of endogenous cytokinin pools in tobacco seedlings: A modelling approach, ANNALS OF BOTANY 91, 585-597 [AIS=1.208, IF=3.501]
• Billova, S., Kizek, R., Jelen, F., Novotna, P. (2003), Square-wave voltammetric determination of cefoperazone in a bacterial culture, pharmaceutical drug, milk, and urine, ANALYTICAL AND BIOANALYTICAL CHEMISTRY 377, 362-369 [AIS=0.888, IF=3.48]
• Rulisek, L., Sponer, J. (2003), Outer-shell and inner-shell coordination of phosphate group to hydrated metal ions (Mg2+, Cu,2+Zn2+, Cd2+) in the presence and absence of nucleobase. The role of nonelectrostatic effects, JOURNAL OF PHYSICAL CHEMISTRY B 107, 1913-1923 [AIS=1.396, IF=3.471]
• Burda, JV., Sponer, J., Hrabadkova, J., Zeizinger, M., Leszczynski, J. (2003), The influence of N-7 guanine modifications on the strength of Watson-Crick base pairing and guanine N-1 acidity: Comparison of gas-phase and condensed-phase trends, JOURNAL OF PHYSICAL CHEMISTRY B 107, 5349-5356 [AIS=1.396, IF=3.471]
• Gresh, N., Sponer, JE., Spackova, N., Leszczynski, J., Sponer, J. (2003), Theoretical study of binding of hydrated Zn(II) and Mg(II) cations to 5 '-guanosine monophosphate. Toward polarizable molecular mechanics for DNA and RNA, JOURNAL OF PHYSICAL CHEMISTRY B 107, 8669-8681 [AIS=1.396, IF=3.471]
• Kasparkova, J., Mackay, FS., Brabec, V., Sadler, PJ. (2003), Formation of platinated GG cross-links on DNA by photoactivation of a platinum(IV) azide complex, JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 8, 741-745 [AIS=1.195, IF=3.415]
• Hason, S., Simonaho, SP., Silvennoinen, R., Vetterl, V. (2003), On the adsorption and kinetics of phase transients of adenosine at the different carbon electrodes modified with a mercury layer, ELECTROCHIMICA ACTA 48, 651-668 [AIS=0.938, IF=3.325]
• Kasparkova, J., Novakova, O., Farrell, N., Brabec, V. (2003), DNA binding by antitumor trans[PtCl2(NH3)(thiazole)]. Protein recognition and nucleotide excision repair of monofunctional adductst, BIOCHEMISTRY 42, 792-800 [AIS=1.315, IF=3.226]
• Novakova, O., Chen, HM., Vrana, O., Rodger, A., Sadler, PJ., Brabec, V. (2003), DNA interactions of monofunctional organometallic ruthenium(II) antitumor complexes in cell-free media, BIOCHEMISTRY 42, 11544-11554 [AIS=1.315, IF=3.226]
• Strouhal, M., Kizek, R., Vecek, J., Trnkova, L., Nemec, M. (2003), Electrochemical study of heavy metals and metallothionein in yeast Yarrowia lipolytica, BIOELECTROCHEMISTRY 60, 29-36 [AIS=0.646, IF=2.652]
• Trnkova, L., Jelen, F., Postbieglova, I. (2003), Application of elimination voltammetry to the resolution of adenine and cytosine signals in oligonucleotides. I. Homooligodeoxynucleotides dA(9) and dC(9), ELECTROANALYSIS 15, 1529-1535 [AIS=0.615, IF=2.63]
• Bryja, V., Sedlacek, J., Zahradnickova, E., Sevcikova, S., Pachernik, J., Soucek, K., Hofmanova, J., Kozubik, A., Smarda, J. (2003), Lipoxygenase inhibitors enhance tumor suppressive effects of Jun proteins on v-myb-transformed monoblasts BM2, PROSTAGLANDINS & OTHER LIPID MEDIATORS 72, 131-145 [AIS=0.72, IF=2.56]
• Leontowicz, M., Gorinstein, S., Leontowicz, H., Krzeminski, R., Lojek, A., Katrich, E., Ciz, M., Martin-Belloso, O., Soliva-Fortuny, R., Haruenkit, R., Trakhtenberg, S. (2003), Apple and pear peel and pulp and their influence on plasma lipids and antioxidant potentials in rats fed cholesterol-containing diets, JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 51, 5780-5785 [AIS=0.669, IF=2.469]
• Krzeminski, R., Gorinstein, S., Leontowicz, H., Leontowicz, M., Gralak, M., Czerwinski, J., Lojek, A., Ciz, M., Martin-Belloso, O., Gligelmo-Miguel, N., Trakhtenberg, S. (2003), Effect of different olive oils on bile excretion in rats fed cholesterol-containing and cholesterol-free diets, JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 51, 5774-5779 [AIS=0.669, IF=2.469]
• Jancinova, V., Drabikova, K., Nosal, R., Petrikova, M., Ciz, M., Lojek, A., Danihelova, E. (2003), Inhibition of FMLP-stimulated neutrophil chemiluminescence by blood platelets increased in the presence of the serotonin-liberating drug chloroquine, THROMBOSIS RESEARCH 109, 293-298 [AIS=0.758, IF=2.406]
• Horak, J., Brzobohaty, B., Lexa, M. (2003), Molecular and physiological characterisation of an insertion mutant in the ARR21 putative response regulator gene from Arabidopsis thaliana, PLANT BIOLOGY 5, 245-254 [AIS=0.82, IF=2.22]
• Hamar, J., Racz, I., Ciz, M., Lojek, A., Pallinger, E., Furesz, J. (2003), Time course of leukocyte response and free radical release in an early reperfusion injury of the superior mesenteric artery, PHYSIOLOGICAL RESEARCH 52, 417-423 [AIS=0.41, IF=1.43]
• Gorinstein, S., Yamamoto, K., Katrich, E., Leontowicz, H., Lojek, A., Leontowicz, M., Ciz, M., Goshev, I., Shalev, U., Trakhtenberg, S. (2003), Antioxidative properties of Jaffa sweeties and grapefruit and their influence on lipid metabolism and plasma antioxidative potential in rats, BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY 67, 907-910 [AIS=0.402, IF=1.326]
• Gorinstein, S., Leontowicz, H., Leontowicz, M., Lojek, A., Ciz, M., Krzeminski, R., Zachwieja, Z., Jastrzebski, Z., Delgado-Licon, E., Martin-Belloso, O., Trakhtenberg, S. (2003), Seed oils improve lipid metabolism and increase antioxidant potential in rats fed diets containing cholesterol, NUTRITION RESEARCH 23, 317-330 [AIS=0.261, IF=1.197]
• Fedorocko, P., Hoferova, Z., Hofer, M., Brezani, P. (2003), Administration of liposomal muramyl tripeptide phosphatidylethanolamine (MTP-PE) and diclofenac in the combination attenuates their anti-tumor activities, NEOPLASMA 50, 176-184 [AIS=0.275, IF=1.192]
• Fridman, AS., Brabec, V., Haroutiunian, SG., Wartell, RM., Lando, DY. (2003), Melting of cross-linked DNA v. cross-linking effect caused by local stabilization of the double helix, JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS 20, 533-545 [AIS=0.32, IF=1.124]
• Nemajerova, A., Smarda, J., Jurdic, P., Kubala, L., Soucek, K., Smardova, J. (2003), Trichostatin A suppresses transformation by the v-myb oncogene in BM2 cells, JOURNAL OF HEMATOTHERAPY & STEM CELL RESEARCH 12, 225-235 [AIS=0, IF=0]
• Spackova, N., Cheatham, TE., Ryjacek, F., Lankas, F., van Meervelt, L., Hobza, P., Sponer, J. (2003), Molecular dynamics simulations and thermodynamics analysis of DNA-drug complexes. Minor groove binding between 4 ',6-diamidino-2-phenylindole and DNA duplexes in solution, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 125, 1759-1769 [AIS=2.701, IF=8.58]
• Sykorova, E., Lim, KY., Kunicka, Z., Chase, MW., Bennett, MD., Fajkus, J., Leitch, AR. (2003), Telomere variability in the monocotyledonous plant order Asparagales, PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES 270, 1893-1904 [AIS=2.231, IF=4.857]
• Bryja, V., Pachernik, H., Kubala, L., Hampl, A., Dvorak, P. (2003), The reverse tetracycline-controlled transactivator rtTA2(S)-S2 is toxic in mouse embryonic stem cells, REPRODUCTION NUTRITION DEVELOPMENT 43, 477-486 [AIS=0.403, IF=1.461]

2002

• Gorinstein, S., Leontowicz, H., Lojek, A., Leontowicz, M., Ciz, M., Stager, MAG., Montes, JMB., Toledo, F., Arancibia-Avila, P., Trakhtenberg, S. (2002), Hypolipidemic effect of beer proteins in experiment on rats, LEBENSMITTEL-WISSENSCHAFT UND-TECHNOLOGIE-FOOD SCIENCE AND TECHNOLOGY 35, 265-271 [AIS=, IF=]
• Friml, J., Benkova, E., Blilou, I., Wisniewska, J., Hamann, T., Ljung, K., Woody, S., Sandberg, G., Scheres, B., Jurgens, G., Palme, K. (2002), AtPIN4 mediates sink-driven auxin gradients and root patterning in Arabidopsis, CELL 108, 661-673 [AIS=20.15, IF=31.152]
• Sevcikova, S., Soucek, K., Kubala, L., Bryja, V., Smarda, J. (2002), Differential effects of v-Jun and C-Jun proteins on v-myb-transformed monoblasts, CELLULAR AND MOLECULAR LIFE SCIENCES 59, 1690-1705 [AIS=2.34, IF=6.09]
• Kasparkova, J., Zehnulova, J., Farrell, N., Brabec, V. (2002), DNA interstrand cross-links of the novel antitumor trinuclear platinum complex BBR3464 - Conformation, recognition by high mobility group domain proteins, and nucleotide excision, JOURNAL OF BIOLOGICAL CHEMISTRY 277, 48076-48086 [AIS=2.223, IF=5.328]
• Stros, M., Ozaki, T., Bacikova, A., Kageyama, H., Nakagawara, A. (2002), HMGB1 and HMGB2 cell-specifically down-regulate the p53-and p73-dependent sequence-specific transactivation from the human Bax gene promoter, JOURNAL OF BIOLOGICAL CHEMISTRY 277, 7157-7164 [AIS=2.223, IF=5.328]
• Warmlander, S., Sponer, JE., Sponer, J., Leijon, M. (2002), The influence of the thymine C5 methyl group on spontaneous base pair breathing in DNA, JOURNAL OF BIOLOGICAL CHEMISTRY 277, 28491-28497 [AIS=2.223, IF=5.328]
• Blaha, L., Kapplova, P., Vondracek, J., Upham, B., Machala, M. (2002), Inhibition of gap-junctional intercellular communication by environmentally occurring polycyclic aromatic hydrocarbons, TOXICOLOGICAL SCIENCES 65, 43-51 [AIS=1.27, IF=4.81]
• Schmidt, KS., Reedijk, J., Weisz, K., Janke, EMB., Sponer, JE., Sponer, J., Lippert, B. (2002), Loss of Hoogsteen pairing ability upon N1 adenine platinum binding, INORGANIC CHEMISTRY 41, 2855-2863 [AIS=1.018, IF=4.657]
• Leontowicz, H., Gorinstein, S., Lojek, A., Leontowicz, M., Ciz, M., Soliva-Fortuny, R., Park, YS., Jung, ST., Trakhtenberg, S., Martin-Belloso, O. (2002), Comparative content of some bioactive compounds in apples, peaches and pears and their influence on lipids and antioxidant capacity in rats, JOURNAL OF NUTRITIONAL BIOCHEMISTRY 13, 603-610 [AIS=1.03, IF=4.288]
• McGregor, TD., Hegmans, A., Kasparkova, J., Neplechova, K., Novakova, O., Penazova, H., Vrana, O., Brabec, V., Farrell, N. (2002), A comparison of DNA binding profiles of dinuclear platinum compounds with polyamine linkers and the trinuclear platinum phase II clinical agent BBR3464, JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 7, 397-404 [AIS=1.195, IF=3.415]
• Hason, S., Dvorak, J., Jelen, F., Vetterl, V. (2002), Interaction of DNA with echinomycin at the mercury electrode surface as detected by impedance and chronopotentiometric measurements, TALANTA 56, 905-913 [AIS=0.74, IF=3.29]
• Kizek, R., Havran, L., Kubicarova, T., Yosypchuk, B., Heyrovsky, M. (2002), Voltammetry of two single-stranded isomeric end-labeled -SH deoxyoligonucleotides on mercury electrodes, TALANTA 56, 915-918 [AIS=0.74, IF=3.29]
• Kizek, R., Trnkova, L., Sevcikova, S., Smarda, J., Jelen, F. (2002), Silver electrode as a sensor for determination of zinc in cell cultivation medium, ANALYTICAL BIOCHEMISTRY 301, 8-13 [AIS=1.009, IF=3.287]
• Uytterhoeven, K., Sponer, J., Van Meervelt, L. (2002), Two 1 : 1 binding modes for distamycin in the minor groove of d(GGCCAATTGG), EUROPEAN JOURNAL OF BIOCHEMISTRY 269, 2868-2877 [AIS=1.219, IF=3.042]
• Dadak, V., Janiczek, O., Vrana, O. (2002), Cytochrome c forms complexes and is partly reduced at interaction with GPI-anchored alkaline phosphatase, BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS 1570, 9-18 [AIS=0.882, IF=2.958]
• Lexa, M., Genkov, T., Brzobohaty, B. (2002), Inhibitory effects of elevated endogenous cytokinins on nitrate reductase in ipt-expressing tobacco are eliminated by short-term exposure to benzyladenine, PHYSIOLOGIA PLANTARUM 115, 284-290 [AIS=0.8, IF=2.71]
• Murad, L., Lim, KY., Christopodulou, V., Matyasek, R., Lichtenstein, CP., Kovarik, A., Leitch, AR. (2002), The origin of tobacco's T genome is traced to a particular lineage within Nicotiana tomentosiformis (Solanaceae), AMERICAN JOURNAL OF BOTANY 89, 921-928 [AIS=1.339, IF=2.684]
• Ozkan, D., Kara, P., Kerman, K., Meric, B., Erdem, A., Jelen, F., Nielsen, PE., Ozsoz, M. (2002), DNA and PNA sensing on mercury and carbon electrodes by using methylene blue as an electrochemical label, BIOELECTROCHEMISTRY 58, 119-126 [AIS=0.646, IF=2.652]
• Yosypchuk, B., Heyrovsky, M., Palecek, E., Novotny, L. (2002), Use of solid amalgam electrodes in nucleic acid analysis, ELECTROANALYSIS 14, 1488-1493 [AIS=0.615, IF=2.63]
• Gorinstein, S., Leontowicz, H., Lojek, A., Leontowicz, M., Ciz, M., Krzeminski, R., Gralak, M., Czerwinski, J., Jastrzebski, Z., Trakhtenberg, S., Grigelmo-Miguel, N., Soliva-Fortuny, R., Martin-Belloso, O. (2002), Olive oils improve lipid metabolism and increase antioxidant potential in rats fed diets containing cholesterol, JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 50, 6102-6108 [AIS=0.669, IF=2.469]
• Hason, S., Vetterl, V. (2002), Application of carbon electrodes modified with a mercury layer of a different thickness for studies of the adsorption and kinetics of phase transients of cytidine, JOURNAL OF ELECTROANALYTICAL CHEMISTRY 536, 19-35 [AIS=0.646, IF=2.338]
• Drabikova, K., Nosal, R., Jancinova, V., Ciz, M., Lojek, A. (2002), Reactive oxygen metabolite production is inhibited by histamine and H-1-antagonist dithiaden in human PMN leukocytes, FREE RADICAL RESEARCH 36, 975-980 [AIS=0.712, IF=2.215]
• Solar, P., Cavarga, I., Hofmanova, J., Cekanova-Figurova, M., Miskovsky, P., Brezani, P., Hrckova, G., Kozubik, A., Fedorocko, P. (2002), Effect of acetazolamide on hypericin photocytotoxicity, PLANTA MEDICA 68, 658-660 [AIS=0.49, IF=2.04]
• Fedorocko, P., Egyed, A., Vacek, A. (2002), Irradiation induces increased production of haemopoietic and proinflammatory cytokines in the mouse lung, INTERNATIONAL JOURNAL OF RADIATION BIOLOGY 78, 305-313 [AIS=0.512, IF=1.842]
• Kozubek, M., Skalnikova, M., Matula, P., Bartova, E., Rauch, J., Neuhaus, F., Eipel, H., Hausmann, M. (2002), Automated microaxial tomography of cell nuclei after specific labelling by fluorescence in situ hybridisation, MICRON 33, 655-665 [AIS=0.6, IF=1.63]
• Nosal, R., Drabikova, K., Ciz, M., Lojek, A., Danihelova, E. (2002), Effect of H-1-antagonist Dithiaden((R)) on human PMN-leukocyte aggregation and chemiluminescence is stimulus-dependent, INFLAMMATION RESEARCH 51, 557-562 [AIS=0.452, IF=1.586]
• Gorinstein, S., Martin-Belloso, O., Lojek, A., Ciz, M., Soliva-Fortuny, R., Park, YS., Caspi, A., Libman, I., Trakhtenberg, S. (2002), Comparative content of some phytochemicals in Spanish apples, peaches and pears, JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 82, 1166-1170 [AIS=0.432, IF=1.386]
• Lankas, F., Cheatham, TE., Spackova, N., Hobza, P., Langowski, J., Sponer, J. (2002), Critical effect of the N2 amino group on structure, dynamics, and elasticity of DNA polypurine tracts, BIOPHYSICAL JOURNAL 82, 2592-2609 [AIS=1.917, IF=4.39]

2001

• Missura, M., Buterin, T., Hindges, R., Hubscher, U., Kasparkova, J., Brabec, V., Naegeli, H. (2001), Double-check probing of DNA bending and unwinding by XPA-RPA: an architectural function in DNA repair, EMBO JOURNAL 20, 3554-3564 [AIS=5.56, IF=8.993]
• Spackova, N., Berger, I., Sponer, J. (2001), Structural dynamics and cation interactions of DNA quadruplex molecules containing mixed guanine/cytosine quartets revealed by large-scale MD simulations, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 123, 3295-3307 [AIS=2.701, IF=8.58]
• Zouhar, J., Vevodova, J., Marek, J., Damborsky, J., Su, XD., Brzobohaty, B. (2001), Insights into the functional architecture of the catalytic center of a maize beta-glucosidase Zm-p60.1, PLANT PHYSIOLOGY 127, 973-985 [AIS=2.38, IF=6.24]
• Zehnulova, J., Kasparkova, J., Farrell, N., Brabec, V. (2001), Conformation, recognition by high mobility group domain proteins, and nucleotide excision repair of DNA intrastrand cross-links of novel antitumor trinuclear platinum complex BBR3464, JOURNAL OF BIOLOGICAL CHEMISTRY 276, 22191-22199 [AIS=2.223, IF=5.328]
• Lexa, M., Horak, J., Brzobohaty, B. (2001), Virtual PCR, BIOINFORMATICS 17, 192-193 [AIS=2.37, IF=4.926]
• Sponer, JE., Leszczynski, J., Glahe, F., Lippert, B., Sponer, J. (2001), Protonation of platinated adenine nucleobases. Gas phase vs condensed phase picture, INORGANIC CHEMISTRY 40, 3269-3278 [AIS=1.018, IF=4.657]
• Dvorakova, D., Krejci, P., Mayer, J., Fajkus, J., Hampl, A., Dvorak, P. (2001), Changes in the expression of FGFR3 in patients with chronic myeloid leukaemia receiving transplants of allogeneic peripheral blood stem cells, BRITISH JOURNAL OF HAEMATOLOGY 113, 832-835 [AIS=1.495, IF=4.597]
• Stefl, R., Spackova, N., Berger, I., Koca, J., Sponer, J. (2001), Molecular dynamics of DNA quadruplex molecules containing inosine, 6-thioguanine and 6-thiopurine, BIOPHYSICAL JOURNAL 80, 455-468 [AIS=1.917, IF=4.39]
• Sponer, JE., Glahe, F., Leszczynski, J., Lippert, B., Sponer, J. (2001), How nucleobases rotate when bonded to a metal ion: Detailed view from an ab initio quantum chemical study of a cytosine complex of trans-a(2)Pt(II), JOURNAL OF PHYSICAL CHEMISTRY B 105, 12171-12179 [AIS=1.396, IF=3.471]
• Fann, JY., Kovarik, A., Hemleben, V., Tsirekidze, NI., Beridze, TG. (2001), Molecular and structural evolution of Citrus satellite DNA, THEORETICAL AND APPLIED GENETICS 103, 1068-1073 [AIS=0.98, IF=3.36]
• Gorinstein, S., Martin-Belloso, O., Park, YS., Haruenkit, R., Lojek, A., Ciz, M., Caspi, A., Libman, I., Trakhtenberg, S. (2001), Comparison of some biochemical characteristics of different citrus fruits, FOOD CHEMISTRY 74, 309-315 [AIS=0.749, IF=3.146]
• Kozubek, M., Kozubek, S., Lukasova, E., Bartova, E., Skalnikova, M., Matula, P., Matula, P., Jirsova, P., Cafourkova, A., Koutna, I. (2001), Combined confocal and wide-field high-resolution cytometry of fluorescent in situ hybridization-stained cells, CYTOMETRY 45, 1-12 [AIS=0.766, IF=3.032]
• Machala, M., Ciganek, M., Blaha, L., Minksova, K., Vondrack, J. (2001), Aryl hydrocarbon receptor-mediated and estrogenic activities of oxygenated polycyclic aromatic hydrocarbons and azaarenes originally identified in extracts of river sediments, ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY 20, 2736-2743 [AIS=0.721, IF=2.565]
• Vondracek, J., Machala, M., Minksova, K., Blaha, L., Murk, AJ., Kozubik, A., Hofmanova, J., Hilscherova, K., Ulrich, R., Ciganek, M., Neca, J., Svrckova, D., Holoubek, I. (2001), Monitoring river sediments contaminated predominantly with polyaromatic hydrocarbons by chemical and in vitro bioassay techniques, ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY 20, 1499-1506 [AIS=0.721, IF=2.565]
• Machala, M., Vondracek, J., Blaha, L., Ciganek, M., Neca, J. (2001), Aryl hydrocarbon receptor-mediated activity of mutagenic polycyclic aromatic hydrocarbons determined using in vitro reporter gene assay, MUTATION RESEARCH-GENETIC TOXICOLOGY AND ENVIRONMENTAL MUTAGENESIS 497, 49-62 [AIS=0.6, IF=2.55]
• Palecek, J., Hasek, J., Ruis, H. (2001), Rpg1p/Tif32p, a subunit of translation initiation factor 3, interacts with actin-associated protein Sla2p, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 282, 1244-1250 [AIS=0.905, IF=2.548]
• Vevodova, J., Marek, J., Zouhar, J., Brzobohaty, B., Su, XD. (2001), Purification, crystallization and preliminary X-ray analysis of a maize cytokinin glucoside specific beta-glucosidase, ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY 57, 140-142 [AIS=1.07, IF=2.257]
• Radivoyevitch, T., Kozubek, S., Sachs, RK. (2001), Biologically based risk estimation for radiation-induced CML - Inferences from BCR and ABL geometric distributions, RADIATION AND ENVIRONMENTAL BIOPHYSICS 40, 1-9 [AIS=0.54, IF=1.64]
• Bem, P., Burjan, V., Cvachovec, F., Gotz, M., Kralik, M., Kroha, V., Lukasova, E., Simeckova, E., Vincour, V. (2001), Fast neutrons from thick helium target irradiated by 17 MeV deuterons, NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION A-ACCELERATORS SPECTROMETERS DETECTORS AND ASSOCIATED EQUIPMENT 466, 509-512 [AIS=0.339, IF=1.317]
• Dornberger, U., Spackova, N., Walter, A., Gollmick, FA., Sponer, J., Fritzsche, H. (2001), Solution structure of the dodecamer d-(CATGGGCC-CATG)(2) is B-DNA. Experimental and molecular dynamics study, JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS 19, 159-174 [AIS=0.32, IF=1.124]
• Kubinova, R., Machala, M., Minksova, K., Neca, J., Suchy, V. (2001), Chemoprotective activity of boldine: modulation of drug-metabolizing enzymes, PHARMAZIE 56, 242-243 [AIS=0.167, IF=0.812]
• Munoz, J., Sponer, J., Hobza, P., Orozco, M., Luque, FJ. (2001), Interactions of hydrated Mg2+ cation with bases, base pairs, and nucleotides. Electron topology, natural bond orbital, electrostatic, and vibrational study, JOURNAL OF PHYSICAL CHEMISTRY B 105, 6051-6060 [AIS=1.396, IF=3.471]
• Kubala, L., Ciz, M., Vondracek, J., Cizova, H., Cerny, J., Nemec, P., Studenik, P., Duskova, M., Lojek, A. (2001), Peri- and post-operative course of cytokines and the metabolic activity of neutrophils in human liver transplantation, CYTOKINE 16, 97-101 [AIS=0.931, IF=3.123]

2000

• Spackova, N., Berger, I., Sponer, J. (2000), Nanosecond molecular dynamics of zipper-like DNA duplex structures containing sheared G center dot A mismatch pairs, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 122, 7564-7572 [AIS=2.701, IF=8.58]
• Sponer, J., Florian, J., Ng, HL., Sponer, JE., Spackova, N. (2000), Local conformational variations observed in B-DNA crystals do not improve base stacking: computational analysis of base stacking in a d(CATGGGCCCATG)(2) B <-> A intermediate crystal structure, NUCLEIC ACIDS RESEARCH 28, 4893-4902 [AIS=3, IF=7.48]
• Riha, K., McKnight, TD., Fajkus, J., Vyskot, B., Shippen, DE. (2000), Analysis of the G-overhang structures on plant telomeres: evidence for two distinct telomere architectures, PLANT JOURNAL 23, 633-641 [AIS=2.83, IF=6.95]
• Lim, KY., Kovarik, A., Matyasek, R., Bezdek, M., Lichtenstein, CP., Leitch, AR. (2000), Gene conversion of ribosomal DNA in Nicotiana tabacum is associated with undermethylated, decondensed and probably active gene units, CHROMOSOMA 109, 161-172 [AIS=2.272, IF=4.979]
• Lim, KY., Matyasek, R., Lichtenstein, CP., Leitch, AR. (2000), Molecular cytogenetic analyses and phylogenetic studies in the Nicotiana section Tomentosae, CHROMOSOMA 109, 245-258 [AIS=2.272, IF=4.979]
• Van Houdt, H., Kovarik, A., Van Montagu, M., Depicker, A. (2000), Cross-talk between posttranscriptionally silenced neomycin phosphotransferase II transgenes, FEBS LETTERS 467, 41-46 [AIS=1.299, IF=3.541]
• Fulneckova, J., Fajkus, J. (2000), Inhibition of plant telomerase by telomere-binding proteins from nuclei of telomerase-negative tissues, FEBS LETTERS 467, 305-310 [AIS=1.299, IF=3.541]
• Kristoffersen, P., Brzobohaty, B., Hohfeld, I., Bako, L., Melkonian, M., Palme, K. (2000), Developmental regulation of the maize Zm-g60.1 gene encoding a beta-glucosidase located to plastids, PLANTA 210, 407-415 [AIS=1.09, IF=3.37]
• Hampl, A., Pachernik, J., Dvorak, P. (2000), Levels and interactions of p27, cyclin D3, and CDK4 during the formation and maintenance of the corpus luteum in mice, BIOLOGY OF REPRODUCTION 62, 1393-1401 [AIS=1.039, IF=3.3]
• Vodicka, P., Sevcikova, S., Smardova, J., Soucek, K., Smarda, J. (2000), The effects of RAR alpha and RXR alpha proteins on growth, viability, and differentiation of v-MYB-transformed monoblasts, BLOOD CELLS MOLECULES AND DISEASES 26, 395-406 [AIS=0.895, IF=2.901]
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