2009

Černý I., Buděšínský M., Pouzar V., Drašar P.:
Steroids linked with amide bond - extended cholesterol.
Steroids 74 (1): 88-94, 2009.

Čeřovský V., Buděšínský M., Hovorka O., Cvačka J., Voburka Z., Slaninová J., Borovičková L., Fučík V., Bednárová L., Votruba I., Straka J.:
Lasioglossins: Three novel antimicrobial peptides from the venom of the eusocial bee Lasioglossum laticeps (Hymenoptera: Halictidae).
ChemBioChem 10 (12): 2089-2099, 2009.

Dračínský M., Holý A., Jansa P., Kovačková S., Buděšínský M.:
Isotopic exchange of hydrogen at C-5 in pyrimidine derivatives: tautomers with an sp3-hybridised C-5 carbon atom.
European Journal of Organic Chemistry (24): 4117-4122, 2009.

Eignerová B., Slavíková B., Buděšínský M., Dračínský M., Klepetářová B., Šťastná E., Kotora M.:
Synthesis of fluorinated brassinosteroids based on alkene cross-metathesis and preliminary biological assessment.
Journal of Medicinal Chemistry 52 (18): 5753-5757, 2009.

Havlík J., Buděšínský M., Kokoška L., Valterová I., Vašíčková S., Zelený V.:
Norsesquiterpene hydrocarbon, chemical composition and antimicrobial activity of Rhaponticum carthamoides root essential oil.
Phytochemistry 70 (3): 413-418, 2009.

Karban J., Kroutil J., Buděšínský M., Sýkora J., Císařová I.:
Ring-Opening Reactions of Aziridines Fused to a Conformationally Locked Tetrahydropyran Ring.
European Journal of Organic Chemistry (36): 6399-6406, 2009.

Kalinová B., Kindl J., Jiroš P., Žáček P., Vašíčková S., Buděšínský M., Valterová I.:
Composition and Electrophysiological Activity of Constituents Identified in Male Wing Gland Secretion of Bumblebee Parasite Aphomia sociella.
Journal of Natural Products 72 (1): 8-13, 2009.

Kóšiová I., Točík Z., Buděšínský M., Šimák O., Liboska R., Rejman D., Pačes O., Rosenberg I.:
Methyl 4-toluenesulfonyloxymethylphosphonate, a new and versatile reagent for the convenient synthesis of phosphonate-containing compounds.
Tetrahedron Letters 50 (49): 6745-6747, 2009.

Krejčí L., Buděšínský M., Císařová I., Kraus T.:
Tubular duplex alpha-cyclodextrin triply bridged with disulfide bonds: synthesis, crystal structure and inclusion complexes.
Chemical Communications (24): 3557-3559, 2009.

Kumprecht L., Buděšínský M., Vondrášek J., Vymětal J., Černý J., Císařová I., Brynda J., Herzig V., Koutník P., Závada J., Kraus T.:
Rigid duplex alpha-cyclodextrin reversibly connected with disulfide bonds. Synthesis and inclusion complexes.
Journal of Organic Chemistry 74 (3): 1082-1092, 2009.

Pícha J., Buděšínský M., Hančlová I., Šanda M., Fiedler P., Vaněk V., Jiráček J.:
Efficient synthesis of phosphonodepsipeptides derived from norleucine.
Tetrahedron 65 (31): 6090-6103, 2009.

Slavíková B., Krištofiková Z., Chodounská H., Buděšínský M., Durán F. J., Veleiro A. S., Burton G., Kasal A.:
Allopregnanolone (3α-Hydroxy-5α-pregnan-20-one) Derivatives with a Polar Chain in position 16α: Synthesis and activity.
Journal of Medicinal Chemistry 52 (7): 2119-2125, 2009.

Točík Z., Buděšínský M., Barvík Jr. I., Rosenberg I.:
Conformational evaluation of labeled C3'-O-P-13CH2-O-C4'' phosphonate internucleotide linkage, a phosphodiester isostere.
Biopolymers 91 (7): 514-529, 2009.

Vaněk V., Buděšínský M., Rinnová M., Rosenberg I.:
Prolinol-based nucleoside phosphonic acids: new isosteric conformationally flexible nucleotide analogues.
Tetrahedron 65 (4): 862-876, 2009.

Vaněk V., Buděšínský M., Kabeleová P., Šanda M., Kožíšek M., Hančlová I., Mládková J., Brynda J., Rosenberg I., Koutmos M., Garrow T. A., Jiráček J.:
Structure-activity study of new inhibitors of human betaine-homocysteine S-methyltransferase.
Journal of Medicinal Chemistry 52 (12): 3652-3665, 2009.

Vokáčová Z., Buděšínský M., Rosenberg I., Schneider B., Šponer J., Sychrovský V.:
Structure and dynamics of the ApA, ApC, CpA and CpC RNA dinucleoside monophosphates resolved with NMR scalar spin-spin couplings.
Journal of Physical Chemistry B. 113 (4): 1182-1191, 2009.

Doláková P., Dračínský M., Masojídková M., Šolínová V., Kašička V., Holý A.:
Acyclic nucleoside bisphosphonates: Synthesis and properties of chiral 2-amino-4,6-bis[(phosphonomethoxy)alkoxy]pyrimidines.
European Journal of Medicinal Chemistry 44 (6): 2408-2424, 2009.

Doláková P., Dračínský M., Fanfrlík J., Holý A.:
Synthesis of analogues of acyclic nucleoside diphosphates containing a (phosphonomethyl)phosphanyl moiety and studies of their phosphorylation.
European Journal of Organic Chemistry (7): 1082-1092, 2009.

Dračínský M., Cvačka J., Semanská M., Martínek V., Frei E., Stiborová M.:
Mechanism of formation of (deoxy)guanosine adducts derived from peroxidase-catalyzed oxidation of the carcinogenic nonaminoazo dye 1-phenylazo-2-hydroxynaphthalene (SudanI).
Chemical Research in Toxicology 22 (11): 1765-1773, 2009.

Dračínský M., Kaminský J., Bouř P.:
Relative importance of first and second derivatives of nuclear magnetic resonance chemical shifts and spin-spin coupling constants for vibrational averaging.
Journal of Chemical Physics 130 (9): 094106, 2009.

Dračínský M., Kaminský J., Bouř P.:
Structure of the Alanine Hydration Shell as Probed by NMR Chemical Shifts and Indirect Spin-Spin Coupling.
Journal of Physical Chemistry B 113 (44): 14698-14707, 2009.

Hřebabecký H., Dračínský M., Holý A.:
New carbocyclic nucleoside analogues built on a bicyclo[2.2.2]octane-2,2dimethanol template.
Collection of Czechoslovak Chemical Communications 74 (9): 1425-1441, 2009.

Hřebabecký H., Dračínský M., De Palma A., Neyts J., Holý A.:
Synthesis of novel carbocyclic nucleoside analogues derived from 7-oxabicyclo[2.2.1]heptane-2-methanol.
Collection of Czechoslovak Chemical Communications 74 (3): 487-502, 2009.

Hřebabecký H., Dračínský M., De Palma A., Neyts J., Holý A.:
Synthesis of novel racemic carbocyclic nucleoside analogues derived from 4,8-dioxatricyclo[4.2.1.0 3,7]nonane-9-methanol and 4-oxatricyclo[4.3.1.0 3,7]decane-10-methanol, compounds with activity against Coxsackie viruses.
Collection of Czechoslovak Chemical Communications 74 (3): 469-485, 2009.

Hybelbauerová S., Sejbal J., Dračínský M., Rudovská I., Koutek B.:
Unusual p-coumarates from the stems of Vaccinium myrtillus.
Helvetica Chimica Acta 92 (12): 2795-2801, 2009.

Rejman D., Kovačková S., Pohl R., Dračínský M., Fiedler P., Rosenberg I.:
A convenient, high-yield synthesis of 1-substituted uracil and thymine derivatives.
Tetrahedron 65 (41): 8513-8523, 2009.

Šála M., Hřebabecký H., Dračínský M., Masojídková M., De Palma A., Neyts J., Holý A.:
Norbornane as the novel pseudoglycone moiety in nucleosides.
Tetrahedron 65 (45): 9291-9299, 2009.

Hocková D., Holý A., Masojídková M., Keough D. T., de Jersey J., Guddat L. W.:
Synthesis of branched 9-[2-(2-phosphonoethoxy)ethyl]purines as a new class of acyclic nucleoside phosphonates which inhibit Plasmodium falciparum hypoxanthine-guanine-xanthine phosphoribosyltransferase.
Bioorganic & Medicinal Chemistry. 17 (17): 6218-6232, 2009.

Rejman D., Pohl R., Kočalka P., Masojídková M., Rosenberg I.:
Pyrrolidine N-alkylphosphonates and related nucleotide analogues: synthesis and stereochemistry.
Tetrahedron 65 (18): 3673-3681, 2009.

Adriaenssens L., Severa L., Vávra J., Šálová T., Hývl J., Čížková M., Pohl R., Šaman D., Teplý F.:
Bio- and air-tolerant carbon–carbon bond formations via organometallic ruthenium catalysis.
Collection of Czechoslovak Chemical Communications 74 (7/8): 1023-1034, 2009.

Adriaenssens L., Severa L., Šálová T., Císařová I., Pohl R., Šaman D., Rocha S. V., Finney N. S., Pospíšil L., Slavíček P., Teplý F.:
Helquats: A facile, modular, scalable route to novel helical dications.
Chemistry - A European Journal 15 (5); 1072-1076, 2009.

Beier P., Pohl R., Alexandrova A.:
An efficient and highly selective synthesis of (Z)-fluoroenol phosphates from hydroxy difluorophosphonates.
Synthesis (6): 957-962, 2009.

Čerňová M., Pohl R., Hocek M.:
Switching the regioselectivity of direct C-H arylation of 1,3-dimethyluracil.
European Journal of Organic Chemistry (22): 3698-3701, 2009.

Hasník Z., Pohl R., Hocek M.:
Cross-coupling Reactions of Halopurines with Aryl- and Alkyltrifluoroborates. The Scope and Limitations in the Synthesis of Modified Purines.
Synthesis (8): 1309-1377, 2009.

Hasník Z., Pohl R., Klepetářová B., Hocek M.:
Synthesis of (purin-6-yl)acetates and their transformations to 6-(2-hydroxyethyl)- and 6-(carbamoylmethyl)purines.
Collection of Czechoslovak Chemical Communications 74 (7/8): 1035-1059, 2009.

Jahn U., Kafka F., Pohl R., Jones P.G.:
N,3,4-Trisubstituted pyrrolidines by electron transfer-induced oxidative cyclizations of N-allylic beta-amino ester enolates.
Tetrahedron 65 (52): 10917-10929, 2009.

Kalachová L., Pohl R., Hocek M.:
Synthesis of 2'-deoxyuridine and 2'-deoxycytidine nucleosides bearing bipyridine and terpyridine ligands in position 5.
Synthesis (1): 105-112, 2009.

Klečka M., Pohl R., Klepetářová B., Hocek M.:
Direct C-H borylation and C-H arylation of pyrrolo[2,3-d]pyrimidines: Synthesis of 6,8-disubstituted 7-deazapurines.
Organic & Biomolecular Chemistry 7 (5): 866-868, 2009.

Pomeisl K., Holý A., Pohl R., Horská K.:
Use of Pd-catalyzed Suzuki-Miyaura coupling reaction in the rapid synthesis of 5-aryl-6-(phosphonomethoxy)uracils and evaluation of their inhibitory effect towards human thymidine phosphorylase.
Tetrahedron 65 (41): 8486-8492, 2009.

Rejman D., Kočalka P., Pohl R., Točík Z., Rosenberg I.:
Synthesis and hybridization of oligonucleotides modified at AMP sites with adenine pyrrolidine phosphonate nucleotides.
Collection of Czechoslovak Chemical Communications 74 (6): 935-955, 2009.

Riedl J., Horáková P., Šebest P., Pohl R., Havran L., Fojta M., Hocek M.:
Tetrathiafulvalene-labelled nucleosides and nucleoside triphosphates. Synthesis, electrochemistry and scope of their polymerase incorporation into DNA.
European Journal of Organic Chemistry (21): 3519-3525, 2009.

Severa L., Vávra J., Kohoutová A., Čížková M., Šálová T., Hývl J., Šaman D., Pohl R., Adriaenssens L., Teplý F.:
Air-tolerant C–C bond formation via organometallic ruthenium catalysis: diverse catalytic pathways involving (C5Me5)Ru or (C5H5)Ru are robust to molecular oxygen.
Tetrahedron Letters 50 (31): 4526-4528, 2009.

Štefko M., Pohl R., Hocek M.:
Synthesis of benzamide C-ribonucleosides by Pd-catalyzed aminocarbonylations.
Tetrahedron 65 (23): 4471-4483, 2009.

Vrábel M., Horáková Brázdilová P., Pivoňková H., Kalachová L., Černocká H., Cahová H., Pohl R., Šebest P., Havran L., Hocek M., Fojta M.:
Base-modified DNA labeled by [Ru(bpy)3]2+ and [Os(bpy)3]2+ complexes: construction by polymerase incorporation of modified nucleoside triphosphates, electrochemical and luminescent properties, and applications.
Chemistry - A European Journal 15 (5): 1144-1154, 2009.

Andronova A., Szydlo F., Teplý F., Tobrmanová M., Volot A., Stará I., Starý I., Rulíšek L., Šaman D., Cvačka J., Fiedler P., Vojtíšek P.:
The Quest for alternative routes to racemic and nonracemic azahelicene derivatives.
Collection of Czechoslovak Chemical Communications 74 (1): 189-215, 2009.

Jurček O., Wimmer Z., Bennettová B., Moravcová J., Drašar P., Šaman D..:
Novel Juvenogens (Insect Hormonogenic Agents): Preparation and Biological Tests on Neobellieria bullata.
Journal of Agricultural and Food Chemistry 57 (22): 10852-10858, 2009.

Kunetskiy R. A., Císařová I., Šaman D., Lyapkalo I.:
New Lipophilic 2-Amino-N,N’-dialkyl-4,5-dimethylimidazolium Cations: Synthesis, Structure, Properties, and Outstanding Thermal Stability in Alkaline Media.
Chemistry - A European Journal 15 (37): 9477-9485, 2009.

Sehnal P., Stará I., Šaman D., Tichý M., Míšek J., Cvačka J., Rulíšek L., Chocholoušová J., Vacek J., Goryl G., Szymonski M., Císařová I., Starý I.:
An organometallic route to long helicenes.
Proceedings of the National Academy of Sciences of the United States of America 106 (32): 13169-13174, 2009.

Zubrik A., Šaman D., Vašíčková S., Simoneit B. R. T., Turčániová L., Lovás M., Cvačka J.:
Phyllocladane in brown coal from Handlová, Slovakia: Isolation and structural characterization.
Organic Geochemistry 40 (1): 126-134, 2009.

Zawada Z., Šebestík J., Bednárová L., Bouř P., Hlaváček J., Stibor I.:
Synthetic study on prion protein fragments using a SPPS and native chemical ligation.
Amino Acids 37 (Suppl. 1): 44-44, 2009.

Kaminský J., Kapitán J., Baumbruk V., Bednárová L., Bouř P.:
Interpretation of Raman and Raman optical activity spectra of a flexible sugar derivative, the gluconic acid anion.
Journal of Physical Chemistry A 113 (15): 3594-3601, 2009.

Lakhani A., Maloň P., Keiderling T.A..:
Comparison of vibrational circular dichroism instruments: development of a new dispersive VCD.
Applied Spectroscopy 63 (7): 775-785, 2009.