safar | Institute of Experimental Botany AS CR

RNDr. Jan Šafář, Ph.D.

Email: safar@ueb.cas.cz
Tel.: +420 585 238 710

Address:
Šlechtitelů 31, 783 71, Olomouc - Holice, Česká republika
Room number: 204

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Jan Šafář EN

Position:

scientist

Workgroup:

Centre of Plant Structural and Functional Genomics

Publications:

Number of publications: 47

2016

The expansion of heterochromatin blocks in rye reflects the co-amplification of tandem repeats and adjacent transposable elements

Evtushenko, E.V., Levitsky, V.G., Elisafenko, E.A., Gunbin, K.V., Belousov, A.I., Šafář, J., Doležel, J., Vershinin, A.V.
BMC GENOMICS 17 337 2016 Fulltext: PDF link on intranet only
Characterization of new allele influencing flowering time in bread wheat introgressed from Triticum militinae

Ivaničová, Z., Jakobson, I., Reis, D., Šafář, J., Milec, Z., Abrouk, M., Doležel, J., Järve, K., Valárik, M.
NEW PHYTOLOGIST 33 718-727 2016 Fulltext: PDF link on intranet only
Construction of BAC libraries from flow-sorted chromosomes

Šafář, J., Šimková, H., Doležel, J.
Plant Cytogenetics: Methods and Protocols 135-149 2016 Fulltext: PDF link on intranet only

2015

The physical map of wheat chromosome 5DS revealed gene duplications and small rearrangements

Akpinar, B.A., Magni, F., Yuce, M., Lucas, S.J., Šimková, H., Šafář, J., Vautrin, S., Bergès, H., Cattonaro, F., Doležel. J., Budak, H.
BMC GENOMICS 16 453 2015 Fulltext: PDF link on intranet only
A high-resolution physical map integrating an anchored chromosome with the BAC physical maps of wheat chromosome 6B

Kobayashi, F., Wu, J., Kanamori, H., Tanaka, T., Katagiri, S., Karasawa, W., Kaneko, S., Watanabe, S., Sakaguchi, T., Hanawa, Y., Fujisawa, H., Kurita, K., Abe, C., Iehisa, J.C.M., Ohno, R., Šafář, J., Šimková, H., Mukai, Y., Hamada, M., Saito, M., Ishikawa, G., Katayose, Y., Endo, T.R., Takumi, S., Nakamura, T., Sato, K., Ogihara, Y., Hayakawa, K., Doležel, J., Nasuda, S., Matsumoto, T., Handa, H.
BMC GENOMICS 16 595 2015 Fulltext: PDF link on intranet only

2014

Can a late bloomer become an early bird? Tools for flowering time adjustment

Milec Z., Valárik M., Bartoš J., Šafář J.
BIOTECHNOLOGY ADVANCES 32 200-214 2014 Fulltext: PDF link on intranet only
Can a late bloomer become an early bird? Tools for flowering time adjustment

Milec, Z., Valárik, M., Bartoš, J., Šafář, J.
BIOTECHNOLOGY ADVANCES 32 200-214 2014 Fulltext: PDF link on intranet only
The Wheat Black Jack: Advances towards sequencing the 21 chromosomes of bread wheat

Choulet, F., Caccamo, M., Wright, J., Alaux, M., Šimková, H., Šafář, J., Leroy, P., Doležel, J., Rogers, J., Eversole, K., Feuillet, C.
Genomics of plant genetic resources 405-438 2014 Fulltext: PDF link on intranet only
Structural and functional partitioning of bread wheat chromosome 3B

Choulet, F., Alberti, A., Theil, S., Glover, N., Barbe, V., Daron, J., Pingault, L., Sourdille, P., Couloux, A., Paux, E., Leroy, P., Mangenot, S., Guilhot, N., Le Gouis, J., Balfourier, F., Alaux, M., Jamilloux, V., Poulain, J., Durand, C., Bellec, A., Gaspin, C., Šafář, J., Doležel, J., Rogers, J., Vandepoele, K., Aury, JM., Mayer, K., Berges, H., Quesneville, H., Wincker, P., Feuillet, C.
SCIENCE 345(6194) 1249721 2014 Fulltext: PDF link on intranet only
Expression response of duplicated metallothionein 3 gene to copper stress in Silene vulgaris ecotypes

Nevrtalova, E., Baloun, J., Hudzieczek, V., Cegan, R., Vyskot, B., Doležel, J., Šafář, J., Milde, D., Hobza, R.
PROTOPLASMA 251 1427-1439 2014 Fulltext: PDF link on intranet only

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	Endosidin2 targets conserved exocyst complex subunit EXO70 to inhibit exocytosis, PNAS 2015: E41-E50, 2015
	Cell-Type-Specific Cytokinin Distribution within the Arabidopsis Primary Root Apex, PLANT CELL 27: 1955-1967, 2015
	Multiple mechanisms of nitrate sensing by Arabidopsis nitrate transceptor NRT1.1, NATURE PLANTS 1, March: 1-8, 2015
	DELAY OF GERMINATION 1 mediates a conserved coat-dormancy mechanism for the temperature- and gibberellin-dependent control of seed germination, PNAS 2014: E3571-E3580, 2014
	A new link between stress response and nucleolar function during pollen development in Arabidopsis mediated by AtREN1 protein, PLANT CELL AND ENVIRONMENT 37: 670-683, 2014

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