Čeština
EnglishBMC GENOMICS
Homologous recombination changes the context of Cytochrome b transcription in the mitochondrial genome of Silene vulgaris KRA
Štorchová H., Stone J.D., Sloan D.B., Abeyawardana O., Müller K., Walterová J., Pažoutová M.BMC GENOMICS In press : , 2018
Klíčová slova: Cytoplasmic Male Sterility, Silene vulgaris, mitochondrial genome, homologous recombination
The slowdown of Y chromosome expansion in dioecious Silene latifolia due to DNA loss and male-specific silencing of retrotransposons
Puterova, J., Kubat, Z., Kejnovsky, E., Jesionek, W., Čížková, J., Vyskot, B., Hobza, R.BMC GENOMICS 19 : 153 , 2018
Klíčová slova: Epigenetics, Genome size, Silene latifolia, Transposable elements, Y chromosome
Features of the organization of bread wheat chromosome 5BS based on physical mapping
Salina, E.A., Nesterov, M.A., Frenkel, Z., Kiseleva, A.A., Timonova, E.M., Magni, F., Vrána, J., Šafář, J., Šimková, H., Doležel, J., Korol, A., Sergeeva, E.M.BMC GENOMICS 19 : 80 , 2018
Klíčová slova: Chromosome 5BS, Hexaploid wheat, Triticum aestivum, Genetic markers, Physical mapping, Sequencing, Synteny
Sequencing flow-sorted short arm of Haynaldia villosa chromosome 4V provides insights into its molecular structure and virtual gene order
Xiao, J., Dai, K., Fu, L., Vrána, J., Kubaláková, M., Wan, W., Sun, H., Zhao, J., Yu, C., Wu, Y., Abrouk, M., Wang, H., Doležel, J., Wang, X.BMC GENOMICS 18 : 791 , 2017
Klíčová slova: Haynaldia villosa, Flow sorting, Chromosome arm 4VS, Scaffold, Genome zipper
Identification of miRNAs with potential roles in regulation of anther development and male-sterility in 7B-1 male-sterile tomato mutant.
Omidvar V, Mohorianu I, Dalmay T, Fellner MBMC GENOMICS 16 : 878- 893 , 2015
Klíčová slova:
Development of intron targeting (IT) markers specific for chromosome arm 4VS of Haynaldia villosa by chromosome sorting and next-generation sequencing
Wang, H., Dai, K., Xiao, J., Yuan, C., Zhao, R., Doležel, J., Wu, Y., Cao, A., Chen, P., Zhang, S., Wang, X.BMC GENOMICS 18 : 167 , 2017
Klíčová slova: Triticum aestivum, Haynaldia villosa, Molecular marker, Intron polymorphism
The expansion of heterochromatin blocks in rye reflects the co-amplification of tandem repeats and adjacent transposable elements
Evtushenko, E.V., Levitsky, V.G., Elisafenko, E.A., Gunbin, K.V., Belousov, A.I., Šafář, J., Doležel, J., Vershinin, A.V.BMC GENOMICS 17 : 337 , 2016
Klíčová slova: Tandem repeats, Transposable elements, Subtelomeric heterochromatin, Rye, Secale cereale, 1RS BAC library, 454 sequences, TE–tandem junctions, DNA motifs
Improvement of the banana “Musa acuminata” reference sequence using NGS data and semi-automated bioinformatics methods
Martin, G., Baurens, F.-C., Droc, G., Rouard, M., Cenci, A., Kilian, A., Hastie, A., Doležel, J., Aury, J.-M., Alberti, A., Carreel, F., D’Hont, A.BMC GENOMICS 17 : 243 , 2016
Klíčová slova: Musa acuminata, Genome assembly, Bioinformatics tool, Paired-end sequences, GBS, Genome map
Identifying new sex-linked genes through BAC sequencing in the dioecious plant Silene latifolia
Blavet, N., Blavet, H., Muyle, A., Käfer, J., Cegan, R., Deschamps, C., Zemp, N., Mousset, S., Aubourg, S., Bergero, R., Charlesworth, D., Hobza, R., Widmer, A., Marais, G.A.B.BMC GENOMICS 16 : 546 , 2015
Klíčová slova: Sex chromosomes, Sex-linked genes, Plant, BAC, RNA-seq, Gene loss, Y degeneration, Silene latifolia, Silene vulgaris
High transcript abundance, RNA editing, and small RNAs in intergenic regions within the massive mitochondrial genome of the angiosperm Silene noctiflora
Wu Z.Q., Stone J.D., Štorchová H., Sloan D.B.BMC GENOMICS 16 : 938 , 2015
Klíčová slova: antisense RNA; junk DNA; mtDNA; ORFs; plant mitochondrial genome; regulatory RNA; spurious transcription