Flow sorting plant chromosomes
Vrána, J., Cápal, P., Číhalíková, J., Kubaláková, M., Doležel, J.
Plant Cytogenetics: Methods and Protocols : 119-134, 2016
Klíčová slova: Cell cycle synchronization , Chromosome isolation , Cytogenetic stocks , FISH , FISHIS , Flow cytometry and sorting , Metaphase accumulation , Plants
Abstrakt: Nuclear genomes of many important plant species are tremendously complicated to map and sequence. The ability to isolate single chromosomes, which represent small units of nuclear genome, is priceless in many areas of plant research including cytogenetics, genomics, and proteomics. Flow cytometry is the only technique which can provide large quantities of pure chromosome fractions suitable for downstream applications including physical mapping, preparation of chromosome-specifi c BAC libraries, sequencing, and optical mapping. Here, we describe step-by-step procedure of preparation of liquid suspensions of intact mitotic metaphase chromosomes and their fl ow cytometric analysis and sorting.
DOI: 10.1007/978-1-4939-3622-9_10
Fulltext: kontaktujte autory z ÚEB
Autoři z ÚEB: Petr Cápal, Jaroslav Doležel, Jan Vrána
Plant Cytogenetics: Methods and Protocols : 119-134, 2016
Klíčová slova: Cell cycle synchronization , Chromosome isolation , Cytogenetic stocks , FISH , FISHIS , Flow cytometry and sorting , Metaphase accumulation , Plants
Abstrakt: Nuclear genomes of many important plant species are tremendously complicated to map and sequence. The ability to isolate single chromosomes, which represent small units of nuclear genome, is priceless in many areas of plant research including cytogenetics, genomics, and proteomics. Flow cytometry is the only technique which can provide large quantities of pure chromosome fractions suitable for downstream applications including physical mapping, preparation of chromosome-specifi c BAC libraries, sequencing, and optical mapping. Here, we describe step-by-step procedure of preparation of liquid suspensions of intact mitotic metaphase chromosomes and their fl ow cytometric analysis and sorting.
DOI: 10.1007/978-1-4939-3622-9_10
Fulltext: kontaktujte autory z ÚEB
Autoři z ÚEB: Petr Cápal, Jaroslav Doležel, Jan Vrána