Biologia plantarum 57:341-350, 2013 | DOI: 10.1007/s10535-012-0281-1
Identification of promoter regions in the Arabidopsis thaliana atExt1 extensin gene controlling late responses to wounding and pathogen attack
- 1 School of Biological Sciences, College of Natural Sciences, Bangor University, Bangor, Gwynedd, UK
- 2 Institute of Agrobiotechnology, CERTH, Thermi, Thessaloniki, Greece
The Arabidopsis thaliana (L.) Heynh. atExt1 extensin gene is expressed in a cell and tissue-specific manner, in response to developmental cues, and is inducible by a wide range of biotic and abiotic stresses. Over-expression of this gene has been shown to alter stem morphology and to limit the invasiveness of virulent bacterial pathogens, indicating that this cell wall protein gene plays an important role in plant development and defense. A detailed sequence analysis of 3.2 kb of the atExt1 gene promoter region has identified a large number of putative 5'cis-acting elements. Based on the location of clusters of putative promoter control elements, seven atExt1 5' promoter truncations were constructed, fused upstream of the β-glucuronidase (GUS) reporter gene, and transformed into A. thaliana. Transgenic plants carrying the various promoter constructs were challenged by wounding and pathogen attack and analysed for GUS expression - this analysis revealed a complex pattern of regulation, involving positive and negative control regions. Northern analysis using wounded tissues from transgenic Arabidopsis plants carrying the 3.2 kb-promoter::GUS construct confirmed the transcriptional activation of the transgene.
Keywords: β-glucuronidase; Northern blot; promoter truncations; transgenic plant
Subjects: gene promoter; extensin; wounding; pathogens; Northern blot; transgenic plants; β-glucuronidase; gene sequence; gene expression
Species: Arabidopsis thaliana
Received: July 27, 2011; Accepted: August 6, 2012; Published: June 1, 2013Show citation
ACS | AIP | APA | ASA | Harvard | Chicago | IEEE | ISO690 | MLA | NLM | Turabian | Vancouver |
References
- Boyle, B., Brisson, N.: Repression of the defense gene PR-10a by the single-stranded DNA binding protein SEBF. - Plant Cell 13: 2525-2537, 2001.
Go to original source...
- Brisson, L.F., Tenhaken, R., Lamb, C.: Function of oxidative cross-linking of cell wall structural proteins in plant disease resistance. - Plant Cell 6: 1703-1712, 1994.
Go to original source...
- Cannon, M.C., Terneus, K., Hall, Q., Tan, L., Wang, Y., Wegenhart, B.L., Chen, L., Lamport D.T.A., Chen, Y., Kieliszewski M.J.: Self-assembly of the plant cell wall requires an extensin scaffold. - Proc. nat. Acad. Sci. USA 105: 2226-2231, 2008.
Go to original source...
- Cassab, G.I.: Plant cell wall proteins. - Annu. Rev. Plant Physiol. Plant mol. Biol. 49: 281-309, 1998.
Go to original source...
- Cheong, Y.H., Chang, H.-S., Gupta, R., Wang, X., Zhu, T., Luan, S.: Transcriptional profiling reveals novel interactions between wounding, pathogen, abiotic stress, and hormonal responses in Arabidopsis. - Plant Physiol. 129: 661-677, 2002.
Go to original source...
- Clough, S.J., Bent, A.F.: Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. - Plant J. 16: 735-743, 1998.
Go to original source...
- Corbin, D.R., Sauer, N., Lamb, C.J.: Differential regulation of a hydroxyproline-rich glycoprotein gene family in wounded and infected plants. - Mol. cell. Biol. 7: 4337-4344, 1987.
Go to original source...
- Dröge-Laser, W., Kaiser, A., Lindsay, W., Halkier, B.A., Loake, G.J., Doerner, P., Dixon, R.A., Lamb, C.: Rapid stimulation of a soybean protein-serine kinase that phosphorylates a novel bZIP DNA-binding protein, G/HBF-1, during the induction of early transcription-dependent defenses. - EμβBO J. 16: 726-738, 1997.
Go to original source...
- Elliott, K.A.: The regulation of extA: an extensin gene from Brassica napus. - PhD Thesis. University of Wales, Bangor 1998
- Elliott, K.A., Shirsat, A.H.: Promoter regions of the extA extensin gene from Brassica napus control activation in response to wounding and tensile stress. - Plant mol. Biol. 37: 675-687, 1998.
Go to original source...
- Eulgem, T., Rushton, P.J., Robatzek, S., Somssich, I.E.: The WRKY superfamily of plant transcription factors. - Trends Plant Sci. 5: 199-206, 2000.
Go to original source...
- Eulgem, T., Rushton, P.J., Schmelzer, E., Hahlbrock, K., Somssich, I.E.: Early nuclear events in plant defence signalling: rapid gene activation by WRKY transcription factors. - EΜΒO J. 18: 4689-4699, 1999.
Go to original source...
- Gallagher, S.R.: GUS Protocols: Using GUS Gene as a Reporter of Gene Expression. - Academy Press, San Diego 1992.
- Goldsbrough, A.P., Albrecht, H., Stratford, R.: Salicylic acidinducible binding of a tobacco nuclear protein to 10 bp sequence which is highly conserved among stress inducible genes. - Plant J. 3: 563-571, 1993.
Go to original source...
- Goodwin, S.B., Sutter, T.R.: Microarray analysis of Arabidopsis genome response to aluminum stress. - Biol. Plant. 53: 85-99, 2009.
Go to original source...
- Guo, Y., Delseny, M., Puigdomenech, P.: mRNA accumulation and promoter activity of the gene coding for a hydroxyproline-rich glycoprotein in Oryza sativa. - Plant mol. Biol. 25: 159-165, 1994.
Go to original source...
- Hamilton, D.A., Schwarz, Y.H., Mascarenhas, J.P.: A monocot pollen-specific promoter contains separable pollen-specific and quantitative elements. - Plant mol. Biol. 38: 663-669, 1998.
Go to original source...
- Hauffe, K.D., Lee, S.P., Subramaniam, R., Douglas, C.J.: Combinatorial interactions between positive and negative cis-acting elements control spatial patterns of 4cl-1 expression in transgenic tobacco. - Plant J. 4: 235-253, 1993.
Go to original source...
- Hirsinger, C., Salva, I., Marbach, J., Durr, A., Fleck, J., Jamet, E.: The tobacco extensin gene Ext 1.4 is expressed in cells submitted to mechanical constraints and in cells proliferating under hormone control. - J. exp. Bot. 50: 343-355, 1999.
- Humphrey, T.V., Bonetta, D.T., Goring, D.R.: Sentinels at the wall: cell wall receptors and sensors. - New Phytol. 176: 7-21, 2007.
Go to original source...
- Izawa, T., Foster, R., Chua, N.H.: Plant bZIP protein DNA binding specificity. - J. mol. Biol. 230: 1131-1144, 1993.
Go to original source...
- Jefferson, R.A., Kavanagh, T.A., Bevan, M.W.: GUS fusions: β-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. - EMBO J. 6: 3901-3907, 1987.
Go to original source...
- Kawaoka, A., Sato, S., Nakahara, K., Matsushima, N., Okada, N., Sekine, M., Shinmyo, A., Takano, M.: Expression and promoter activity of genes for isozymes of horseradishperoxidase. - Plant Cell Physiol. 33: 1143-1150, 1992.
- Kay, R., Chan, A., Daly, M., McPherson, J.: Duplication of CaMV-35S promoter sequences creates a strong enhancer for plant genes. - Science 236: 1299-1302, 1987.
Go to original source...
- Klotz, K.L., Lagrimini, L.M.: Phytohormone control of the tobacco anionic peroxidase promoter. - Plant mol. Biol. 31: 565-573, 1996.
Go to original source...
- Lamport, D.T.A.: Life behind cell walls: paradigm lost, paradigm regained. - Cell. mol. Life Sci. 58: 1363-1385, 2001.
Go to original source...
- Lebel, E., Heifetz, P., Thorne, L., Uknes, S., Ryals, J., Ward, E.: Functional analysis of regulatory sequences controlling PR-1 gene expression in Arabidopsis. - Plant J. 16: 223-233, 1998.
- Mason, H.S., DeWald, D.B., and Mullet, J.E.: Identification of a methyl jasmonate-responsive domain in the soybean vsp8 promoter. - Plant Cell 5: 241-251, 1993.
- Memelink, J., Swords, K.M.M., Dekam, R.J., Schilperoort, R.A., Hoge, J.H.C., Staehelin, L.A.: Structure and regulation of tobacco extensin. - Plant J. 4: 1011-1022, 1993.
Go to original source...
- Menossi, M., Rabaneda, F., Puigdomenech, P., Martinez-Izquierdo, J.A.: Analysis of regulatory elements of the promoter and the 3' untranslated region of the maize Hrgp gene coding for a cell wall protein. - Plant Cell Rep. 21: 916-923, 2003.
- Merkouropoulos, G.: Regulation and analysis of atExt1, a novel extensin gene from Arabidopsis thaliana. - PhD Thesis. School of Biological Sciences, University of Wales, Bangor 2000.
- Merkouropoulos, G., Barnett, D.C., Shirsat, A.H.: The Arabidopsis extensin gene is developmentally regulated, is induced by wounding, methyl jasmonate, abscisic and salicylic acid, and codes for a protein with unusual motifs. - Planta 208: 212-219, 1999.
Go to original source...
- Merkouropoulos, G., Shirsat, A.H.: The unusual Arabidopsis extensin gene atExt1 is expressed throughout plant development and is induced by a variety of biotic and abiotic stresses. - Planta 217: 356-366, 2003.
Go to original source...
- Meshi, T., Iwabuchi, M.: Plant transcription factors. - Plant Cell Physiol. 36: 1405-1420, 1995.
- Niebel, A., Engler, J.D., Tire, C., Engler, G., Van Montagu, M., Gheysen, G.: Induction patterns of an extensin gene in tobacco upon nematode infection. - Plant Cell 5: 1697-1710, 1993.
Go to original source...
- Nishiuchi, T., Shinshi, H., Suzuki, K.: Rapid and transient activation of transcription of the ERF3 gene by wounding in tobacco leaves - possible involvement of NtWRKYs and autorepression. - J. biol. Chem. 279: 55355-55361, 2004.
Go to original source...
- Ohme-Takagi, M., Shinshi, H.: Structure and expression of a tobacco beta-1,3-glucanase gene. - Plant mol. Biol. 15: 941-946, 1990.
Go to original source...
- Pastuglia, M., Roby, D., Dumas, C., Cock, J.M.: Rapid induction by wounding and bacterial infection of an S gene family receptor-like kinase gene in Brassica oleracea. - Plant Cell 9: 49-60, 1997.
Go to original source...
- Petersen, M., Brodersen, P., Naested, H., Andreasson, E., Lindhart, U., Johansen, B., Nielsen, H.B., Lacy, M., Austin, M.J., Parker, J.E., Sharma, S.B., Klessig, D.F., Martienssen, R., Mattsson, O., Jensen, A.B., Mundy, J.: Arabidopsis MAP kinase 4 negatively regulates systemic acquired resistance. - Cell 103: 1111-1120, 2000.
Go to original source...
- Rouster, J., Leah, R., Mundyt, J., Cameron-Mills, V.: Identification of a methyl jasmonate-responsive region in the promoter of a lipoxygenase 1 gene expressed in barley grain. - Plant J. 11: 513-523, 1997.
Go to original source...
- Roberts, K., Shirsat, A.H.: Increased extensin levels in Arabidopsis affect inflorescence stem thickening and height. - J. exp. Bot. 57: 537-545, 2006.
Go to original source...
- Rushton, P.J., Reinstadler, A., Lipka, V., Lippok, B., Somssich, I.E.: Synthetic plant promoters containing defined regulatory elements provide novel insights into pathogen- and wound-induced signaling. - Plant Cell 14: 749-762, 2002.
Go to original source...
- Rushton, P.J., Somssich, I.E.: Transcriptional control of plant genes responsive to pathogens. - Curr. Opin. Plant Biol. 1: 311-315, 1998.
Go to original source...
- Sambrook, J., Fritsch, E.F., Maniatis, T.: Molecular Cloning: a Laboratory Manual (2nd Ed.). - Cold Spring Harbor Laboratory Press, New York 1989.
- Sasaki, K., Ito, H., Mitsuhara, I., Hiraga, S., Seo, S., Matsui, H., Ohashi, Y.: A novel wound-responsive cis-element, VWRE, of the vascular system-specific expression of a tobacco peroxidase gene, tpoxN1. - Plant mol. Biol. 62: 753-768, 2006.
Go to original source...
- Savenstrand, H., Brosche, M., Strid, A.: Regulation of gene expression by low levels of ultraviolet-B radiation in Pisum sativum: isolation of novel genes by suppression subtractive hybridisation. - Plant Cell Physiol. 43: 402-410, 2002.
Go to original source...
- Schenk, P.M., Kazan, K., Wilson, I., Anderson, J.P., Richmond, T., Somerville, S.C., Manners, J.M.: Coordinated plant defense responses in Arabidopsis revealed by microarray analysis. - Proc. nat. Acad. Sci. USA 97: 11655-11660, 2000.
Go to original source...
- Sessa, G., Morelli, G., Ruberti, I.: The ATHB-1 and -2 HD-ZIP domains homodimerise forming complexes of different DNA binding specificities. - EMBO J. 12: 3507-3517, 1993.
Go to original source...
- Shirsat, A.H., Wieczorek, D., Kozbial, P.: A gene for Brassica napus extensin is differentially expressed on wounding. - Plant mol. Biol. 30: 1291-1300, 1996.
Go to original source...
- Showalter, A.M., Bell, J.N., Cramer, C.L., Bailey, J.A., Varner, J.E,, Lamb, C.J.: Accumulation of hydroxyproline-rich glycoprotein mRNAs in response to funga1 elicitor and infection. - Proc. nat. Acad. Sci. USA 82: 6551-6555, 1985.
Go to original source...
- Solano, R., Nieto, C., Avila, J., Canas, L., Diaz, I., Pazares, J.: Dual DNA binding specificity of a petal epidermis-specific MYB transcription factor (MYB.Ph3) from Petunia hybrida. - EMBO J. 14: 1773-1784, 1995.
Go to original source...
- Tire, C., Derycke, R., Deloose, M., Inze, D., Van Montagu M., Engler, G.: Extensin gene expression is induced by mechanical stimuli leading to local cell wall strengthening in Nicotiana plumbaginifolia. - Planta 195: 175-181, 1994.
Go to original source...
- Wei, G., Shirsat, A.H.: Extensin over-expression in Arabidopsis limits pathogen invasiveness. - Mol. Plant Pathol. 7: 579-592, 2006.
Go to original source...
- Wingate, V.P.M., Ryan, C.A.: Uniquely regulated proteinase inhibitor I gene in a wild tomato species: inhibitor I family gene is wound-inducible in leaves and developmentally regulated in fruit. - Plant Physiol. 97: 496-501, 1991.
Go to original source...
- Wycoff, K.L., Powell, P.A., Gonzales, R.A., Corbin., D.R., Lamb, C., Dixon, R.A.: Stress activation of a bean hydroxyproline-rich glycoprotein promoter is superimposed on a pattern of tissue-specific developmental expression. - Plant Physiol. 109: 41-52, 1995.
Go to original source...
- Yamada, T., Sriprasertsak, P., Kato, H., Hashimoto, T., Shimizu, H., Shiraishi, T.: Functional-analysis of the promoters of phenylalanine ammonia-lyase genes in pea. - Plant Cell Physiol. 35: 917-926, 1994.
- Yamada, T., Tanaka, Y., Sriprasertsak, P., Kato, H., Hashimoto, T., Kawamata, S., Ichinose, Y., Shiraishi, T., Oku, H.: Phenylalanine ammonia-lyase genes from Pisum sativum: structure, organ-specific expression and regulation by fungal elicitor and suppressor. - Plant Cell Physiol. 33: 715-725, 1992.
- Yu, D., Chen, C., Chen, Z.: Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. - Plant Cell 13: 1527-1539, 2001.
Go to original source...