ASEP Publications
0498461 - UOCHB-X 2019 RIV US eng J - Journal Article
Allolio, Christoph - Magarkar, Aniket - Jurkiewicz, Piotr - Baxová, Katarína - Javanainen, Matti - Mason, Philip E. - Šachl, Radek - Cebecauer, Marek - Hof, Martin - Horinek, D. - Heinz, V. - Rachel, R. - Ziegler, C. M. - Schröfel, A. - Jungwirth, Pavel
Arginine-rich cell-penetrating peptides induce membrane multilamellarity and subsequently enter via formation of a fusion pore.
Proceedings of the National Academy of Sciences of the United States of America. Roč. 115, č. 47 (2018), s. 11923-11928. ISSN 0027-8424
R&D Projects: GA ČR(CZ) GA16-01074S; GA ČR GA17-03160S
Institutional Support: RVO:61388963 ; RVO:61388955
Keywords: cell-penetrating peptide * membrane fusion * fluorescence microscopy * electron microscopy * molecular dynamics
Subject RIV: CF - Physical & Theoretical Chemistry; CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry; Physical chemistry (UFCH-W)
Impact factor: 9.580, year: 2018
https://www.pnas.org/content/115/47/11923
Jungwirth, Pavel
Permanent link: http://hdl.handle.net/11104/0290827
0453494 - UFCH-W 2017 RIV GB eng J - Journal Article
Amaro, Mariana - Filipe, H. A. - Ramalho, J. P. P. - Hof, Martin - Loura, L. M. S.
Fluorescence of nitrobenzoxadiazole (NBD) labeled lipids in model membranes is connected not to lipid mobility, but to probe location.
Physical Chemistry Chemical Physics. Roč. 18, č. 10 (2016), s. 7042-7054. ISSN 1463-9076
R&D Projects: GA ČR GBP208/12/G016
Institutional Support: RVO:61388955
Keywords: fluorescence * nitrobenzoxadiazole
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 4.123, year: 2016
Permanent link: http://hdl.handle.net/11104/0254355
0461881 - UFCH-W 2017 RIV DE eng J - Journal Article
Amaro, Mariana - Šachl, Radek - Aydogan, Gokcan - Mikhalyov, I. - Vácha, R. - Hof, Martin
GM1 Ganglioside Inhibits β-Amyloid Oligomerization Induced by Sphingomyelin.
Angewandte Chemie - International Edition. Roč. 55, č. 32 (2016), s. 9411-9415. ISSN 1433-7851
R&D Projects: GA ČR(CZ) GBP208/12/G016
GA MŠk(CZ) LM2010005
Institutional Support: RVO:61388955
Keywords: amyloid beta-peptides * Alzheimer's disease * diffusion coefficients
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 11.994, year: 2016
Permanent link: http://hdl.handle.net/11104/0261444
0472860 - UFCH-W 2018 RIV GB eng J - Journal Article
Amaro, Mariana - Reina, F. - Hof, Martin - Eggeling, Ch. - Sezgin, E.
Laurdan and Di-4-ANEPPDHQ probe different properties of the membrane.
Journal of Physics D-Applied Physics. Roč. 50, č. 13 (2017), č. článku 134004. ISSN 0022-3727
R&D Projects: GA ČR(CZ) GBP208/12/G016
Institutional Support: RVO:61388955
Keywords: cell membrane * lipid packing * laurdan
Subject RIV: CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry
Impact factor: 2.373, year: 2017
Permanent link: http://hdl.handle.net/11104/0270083
0443283 - UFCH-W 2016 RIV US eng J - Journal Article
Amaro, Mariana - Brezovský, J. - Kováčová, S. - Sýkora, Jan - Bednář, D. - Němec, V. - Lišková, V. - Kurumbang, N. P. - Beerens, K. - Chaloupková, R. - Paruch, K. - Hof, Martin - Damborský, J.
Site-Specific Analysis of Protein Hydration Based on Unnatural Amino Acid Fluorescence.
Journal of the American Chemical Society. Roč. 137, č. 15 (2015), s. 4988-4992. ISSN 0002-7863
R&D Projects: GA ČR GBP208/12/G016
Institutional Support: RVO:61388955
Keywords: analysis * fluorescence * hydration of proteins
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 13.038, year: 2015
Permanent link: http://hdl.handle.net/11104/0246037
0436040 - UFCH-W 2015 RIV US eng J - Journal Article
Amaro, Mariana - Šachl, Radek - Jurkiewicz, Piotr - Coutinho, A. - Prieto, M. - Hof, Martin
Time-Resolved Fluorescence in Lipid Bilayers: Selected Applications and Advantages over Steady State.
Biophysical Journal. Roč. 107, č. 12 (2014), s. 2751-2760. ISSN 0006-3495
R&D Projects: GA ČR(CZ) GC14-03141J; GA MŠk LH13259
Institutional Support: RVO:61388955
Keywords: nanoparticles * reactivity * energetics
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 3.972, year: 2014
Permanent link: http://hdl.handle.net/11104/0241754
0424707 - UFCH-W 2015 RIV US eng J - Journal Article
Benda, A. - Kapusta, Peter - Hof, Martin - Gaus, K.
Fluorescence spectral correlation spectroscopy (FSCS) for probes with highly overlapping emission spectra.
Optics Express. Roč. 22, č. 3 (2014), s. 2973-2988. ISSN 1094-4087
R&D Projects: GA AV ČR KJB400400904; GA ČR GBP208/12/G016
Institutional Support: RVO:61388955
Keywords: spectroscopy * fluorescence and luminiscence * confocal microscopy
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 3.488, year: 2014
Permanent link: http://hdl.handle.net/11104/0230740
0485588 - UFCH-W 2019 RIV US eng J - Journal Article
Braun, S. - Pokorná, Šárka - Šachl, Radek - Hof, Martin - Heerklotz, H. - Hoernke, M.
Biomembrane Permeabilization: Statistics of Individual Leakage Events Harmonize the Interpretation of Vesicle Leakage.
ACS Nano. Roč. 12, č. 1 (2018), s. 813-819. ISSN 1936-0851
R&D Projects: GA ČR GA17-03160S
Institutional Support: RVO:61388955
Keywords: leakage * dye release * pore
Subject RIV: CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry
Impact factor: 13.903, year: 2018
Permanent link: http://hdl.handle.net/11104/0280535
0443142 - FGU-C 2016 RIV NL eng J - Journal Article
Brejchová, Jana - Sýkora, Jan - Ostašov, Pavel - Merta, Ladislav - Roubalová, Lenka - Janáček, Jiří - Hof, Martin - Svoboda, Petr
TRH-receptor mobility and function in intact and cholesterol-depleted plasma membrane of HEK293 cells stably expressing TRH-R-eGFP.
Biochimica Et Biophysica Acta-Biomembranes. Roč. 1848, č. 3 (2015), s. 781-796. ISSN 0005-2736
R&D Projects: GA ČR(CZ) GAP207/12/0919
Institutional Support: RVO:67985823 ; RVO:61388955
Keywords: cholesterol * TRH-R-eGFP mobility * FRAP * RICS * DPH fluorescence * G protein coupling
Subject RIV: CE - Biochemistry; CF - Physical & Theoretical Chemistry
Impact factor: 3.687, year: 2015
Svoboda, Petr
Permanent link: http://hdl.handle.net/11104/0245894
0478167 - UFCH-W 2018 RIV US eng J - Journal Article
Cebecauer, Marek - Hof, Martin - Amaro, Mariana
Impact of GM(1) on Membrane-Mediated Aggregation/Oligomerization of beta-Amyloid: Unifying View.
Biophysical Journal. Roč. 113, č. 6 (2017), s. 1194-1199. ISSN 0006-3495
R&D Projects: GA ČR GA17-03160S
Institutional Support: RVO:61388955
Keywords: SURFACE-PLASMON RESONANCE * ALZHEIMERS-DISEASE * GM1 GANGLIOSIDE
Subject RIV: BO - Biophysics
Obor OECD: Biophysics
Impact factor: 3.495, year: 2017
Permanent link: http://hdl.handle.net/11104/0274355
0498437 - UFCH-W 2019 RIV US eng J - Journal Article
Cebecauer, Marek - Amaro, Mariana - Jurkiewicz, Piotr - Sarmento, Maria Joäo - Šachl, Radek - Cwiklik, Lukasz - Hof, Martin
Membrane Lipid Nanodomains.
Chemical Reviews. Roč. 118, č. 23 (2018), s. 11259-11297. ISSN 0009-2665
R&D Projects: GA ČR GA17-03160S
Institutional Support: RVO:61388955
Keywords: membranes * nanomaterials * lipids
Subject RIV: CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry
Impact factor: 54.301, year: 2018
Cebecauer, Marek Hof, Martin
Permanent link: http://hdl.handle.net/11104/0290809
0499172 - UFCH-W 2019 RIV CH eng J - Journal Article
Cyboran-Mikołajczyk, S. - Jurkiewicz, Piotr - Hof, Martin - Kleszczyńska, H.
The Impact of O-Glycosylation on Cyanidin Interaction with POPC Membranes: Structure-Activity Relationship.
Molecules. Roč. 23, č. 11 (2018), č. článku 2771. ISSN 1420-3049
R&D Projects: GA ČR(CZ) GBP208/12/G016
Institutional Support: RVO:61388955
Keywords: fluorescence depolarization * anthocyanins * flavonoids * order * chemistry * liposomes * laurdan * probes * dppc
Subject RIV: CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry
Impact factor: 3.060, year: 2018
Permanent link: http://hdl.handle.net/11104/0291429
0474912 - UFCH-W 2018 RIV US eng J - Journal Article
Dilgendein, A. P. - Pokorná, Šárka - Lidman, M. - Sparrman, T. - Šachl, Radek - Hof, Martin - Gröbner, G.
Apoptotic Bax at Oxidatively Stressed Mitochondrial Membranes: Lipid Dynamics and Permeabilization.
Biophysical Journal. Roč. 112, č. 10 (2017), s. 2147-2158. ISSN 0006-3495
R&D Projects: GA ČR(CZ) GBP208/12/G016
Institutional Support: RVO:61388955
Keywords: LOW-FREQUENCY MOTION * OXIDIZED PHOSPHOLIPIDS * BILAYER-MEMBRANES
Subject RIV: CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry
Impact factor: 3.495, year: 2017
Permanent link: http://hdl.handle.net/11104/0271819
0458614 - UOCHB-X 2017 RIV DE eng J - Journal Article
Dziuba, Dmytro - Jurkiewicz, Piotr - Cebecauer, Marek - Hof, Martin - Hocek, Michal
A Rotational BODIPY Nucleotide: An Environment-Sensitive Fluorescence-Lifetime Probe for DNA Interactions and Applications in Live-Cell Microscopy.
Angewandte Chemie - International Edition. Roč. 55, č. 1 (2016), s. 174-178. ISSN 1433-7851
R&D Projects: GA ČR GBP206/12/G151; GA ČR(CZ) GC14-03141J
Institutional Support: RVO:61388963 ; RVO:61388955
Keywords: DNA * fluorescence spectroscopy * fluorescent probes * nucleosides * time-resolved spectroscopy
Subject RIV: CC - Organic Chemistry; BO - Biophysics
Impact factor: 11.994, year: 2016
Hof, Martin
- Hocek, Michal
Permanent link: http://hdl.handle.net/11104/0258862
0463825 - UOCHB-X 2017 RIV GB eng J - Journal Article
Dziuba, Dmytro - Pospíšil, Petr - Matyašovský, Ján - Brynda, Jiří - Nachtigallová, Dana - Rulíšek, Lubomír - Pohl, Radek - Hof, Martin - Hocek, Michal
Solvatochromic fluorene-linked nucleoside and DNA as color-changing fluorescent probes for sensing interactions.
Chemical Science. Roč. 7, č. 9 (2016), s. 5775-5785. ISSN 2041-6520
R&D Projects: GA ČR GBP206/12/G151; GA ČR(CZ) GC14-03141J; GA ČR(CZ) GA14-31419S; GA MŠk(CZ) LO1304
GRANT EU: European Commission(XE) 642023 - ClickGene
Institutional Support: RVO:61388963 ; RVO:61388955
Keywords: environmentally sensitive fluorescent * molecular dynamics simulations * oligonucleotides
Subject RIV: CC - Organic Chemistry; CF - Physical & Theoretical Chemistry
Impact factor: 8.668, year: 2016
http://pubs.rsc.org/en/content/articlepdf/2016/sc/c6sc02548j
Hocek, Michal
Permanent link: http://hdl.handle.net/11104/0262923
0471291 - UFCH-W 2018 RIV DE eng J - Journal Article
Fischermeier, E. - Pospíšil, Petr - Sayed, A. - Hof, Martin - Solioz, M. - Fahmy, K.
Dipolar Relaxation Dynamics at the Active Site of an ATPase Regulated by Membrane Lateral Pressure.
Angewandte Chemie - International Edition. Roč. 56, č. 5 (2017), s. 1269-1272. ISSN 1433-7851
R&D Projects: GA ČR(CZ) GBP208/12/G016
Institutional Support: RVO:61388955
Keywords: fluorescence * ion pump * membrane proteins * nanodiscs * time-resolved emission
Subject RIV: CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry
Impact factor: 12.102, year: 2017
Permanent link: http://hdl.handle.net/11104/0268681
0429619 - UFCH-W 2015 RIV NL eng J - Journal Article
Först, G. - Cwiklik, Lukasz - Jurkiewicz, Piotr - Schubert, R. - Hof, Martin
Interactions of beta-blockers with model lipid membranes: Molecular view of the interaction of acebutolol, oxprenolol, and propranolol with phosphatidylcholine vesicles by time-dependent fluorescence shift and molecular dynamics simulations.
European Journal of Pharmaceutics and Biopharmaceutics. Roč. 87, č. 3 (2014), s. 559-569. ISSN 0939-6411
R&D Projects: GA ČR GBP208/12/G016
Institutional Support: RVO:61388955
Keywords: Drug-membrane interactions * Dtmac * Generalized polarization
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 3.383, year: 2014
Jurkiewicz, Piotr
Permanent link: http://hdl.handle.net/11104/0234697
0493474 - UFCH-W 2019 RIV GB eng J - Journal Article
Ghose, Avisek - Amaro, Mariana - Kovaříček, Petr - Hof, Martin - Sýkora, Jan
6,7-dimethoxy-coumarin as a probe of hydration dynamics in biologically relevant systems.
Methods and Applications in Fluorescence. Roč. 6, č. 2 (2018), č. článku 025005. ISSN 2050-6120
R&D Projects: GA ČR(CZ) GA16-06096S
Institutional Support: RVO:61388955
Keywords: proton-transfer reactions * aot reverse micelles * solvation dynamics * photophysical properties * stokes shift * tunnel mouth * live cell * fluorescence
Subject RIV: CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry
Impact factor: 2.940, year: 2018
Sýkora, Jan
Permanent link: http://hdl.handle.net/11104/0286837
0428128 - UFCH-W 2015 RIV DE eng M - Monograph chapter
Hof, Martin - Macháň, Radek - Sablinskas, V. - Steiner, G.
Applications.
Handbook of Spectroscopy. Second Comletely Revised and Enlarged Edition. Vol. 1. 2. Weinheim: Wiley-VCH, 2014 - (Gauglitz, G.; Moore, D.), s. 95-181. ISBN 978-3-527-32150-6
R&D Projects: GA ČR GBP208/12/G016
GA MŠk(CZ) CZ.1.07/2.3.00/20.0092
Institutional Support: RVO:61388955
Keywords: spectroscopy * Raman spectroscopy * mild infrared spectroscopy
Subject RIV: CF - Physical & Theoretical Chemistry
Permanent link: http://hdl.handle.net/11104/0233539
0428127 - UFCH-W 2015 RIV DE eng M - Monograph chapter
Hof, Martin - Macháň, Radek
Basics of Optical Spectroscopy.
Handbook of Spectroscopy. Second Comletely Revised and Enlarged Edition. Vol. 1. 2. Weinheim: Wiley-VCH, 2014 - (Gauglitz, G.; Moore, D.), s. 31-38. ISBN 978-3-527-32150-6
Institutional Support: RVO:61388955
Keywords: spectroscopy * optics * infrared spectroscopy
Subject RIV: CF - Physical & Theoretical Chemistry
Permanent link: http://hdl.handle.net/11104/0233554
0490941 - UFCH-W 2019 RIV GB eng J - Journal Article
Holoubek, A. - Herman, P. - Sýkora, Jan - Brodská, B. - Humpolíčková, Jana - Kráčmarová, M. - Gášková, D. - Hof, Martin - Kuželová, K.
Monitoring of nucleophosmin oligomerization in live cells.
Methods and Applications in Fluorescence. Roč. 6, č. 3 (2018), č. článku 035016. ISSN 2050-6120
R&D Projects: GA ČR(CZ) GA16-06096S
Institutional Support: RVO:61388955
Keywords: B23 * FLIM-FRET * nucleolus
Subject RIV: CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry
Impact factor: 2.940, year: 2018
Permanent link: http://hdl.handle.net/11104/0285049
0474712 - UFCH-W 2018 RIV GB eng J - Journal Article
Javanainen, M. - Melcrová, Adéla - Magarkar, Aniket - Jurkiewicz, Piotr - Hof, Martin - Jungwirth, Pavel - Martinez-Seara, Hector
Two cations, two mechanisms: interactions of sodium and calcium with zwitterionic lipid membranes.
Chemical Communications. Roč. 53, č. 39 (2017), s. 5380-5383. ISSN 1359-7345
R&D Projects: GA ČR GA17-03160S; GA ČR(CZ) GA16-01074S
AV ČR(CZ) AP1102
Akademická prémie - Praemium Academiae
Institutional Support: RVO:61388955 ; RVO:61388963
Keywords: phospholipid bilayers * molecular dynamics * fluorescence
Subject RIV: CF - Physical & Theoretical Chemistry; CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry; Physical chemistry (UOCHB-X)
Impact factor: 6.290, year: 2017
Permanent link: http://hdl.handle.net/11104/0271700
0422078 - UFCH-W 2015 RIV GB eng J - Journal Article
Khandelia, H. - Loubet, B. - Olžyńska, Agnieszka - Jurkiewicz, Piotr - Hof, Martin
Pairing of cholesterol with oxidized phospholipid species in lipid bilayers.
Soft Matter. Roč. 10, č. 4 (2014), s. 639-647. ISSN 1744-683X
R&D Projects: GA ČR GBP208/12/G016
Institutional Support: RVO:61388955
Keywords: MOLECULAR-DYNAMICS SIMULATIONS * MARTINI FORCE-FIELD * PHASE-SEPARATION
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 4.029, year: 2014
Permanent link: http://hdl.handle.net/11104/0230268
0498928 - UFCH-W 2019 RIV US eng J - Journal Article
Kokkonen, P. - Sýkora, Jan - Prokop, Z. - Ghose, Avisek - Bednář, D. - Amaro, Mariana - Beerens, K. - Bidmanová, Š. - Slánská, M. - Březovský, J. - Damborský, J. - Hof, Martin
Molecular Gating of an Engineered Enzyme Captured in Real Time.
Journal of the American Chemical Society. Roč. 140, č. 51 (2018), s. 17999-18008. ISSN 0002-7863
R&D Projects: GA ČR(CZ) GA16-06096S; GA MŠk(CZ) LM2015047; GA MŠk(CZ) LM2015055
GA MŠk(CZ) LM2015042; GA MŠk(CZ) LM2015085
Institutional Support: RVO:61388955
Keywords: Enzyme engineering * molecular gating * Photoinduced electron-transfer-fluorescence correlation spectroscopy
Subject RIV: CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry
Impact factor: 14.695, year: 2018
Hof, Martin
Permanent link: http://hdl.handle.net/11104/0291216
0495130 - UFCH-W 2019 RIV GB eng J - Journal Article
Koukalová, Alena - Pokorná, Šárka - Boyle, A. L. - Lopez Mora, N. - Kros, A. - Hof, Martin - Šachl, Radek
Distinct roles of SNARE-mimicking lipopeptides during initial steps of membrane fusion.
Nanoscale. Roč. 10, č. 40 (2018), s. 19064-19073. ISSN 2040-3364
R&D Projects: GA ČR(CZ) GA18-04871S; GA ČR(CZ) GA17-05903S
Institutional Support: RVO:61388955
Keywords: COILED-COIL PEPTIDES * SELECTIVE VESICLE FUSION * MEDIATED LIPOSOME FUSION
Subject RIV: CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry
Impact factor: 6.970, year: 2018
Šachl, Radek
Permanent link: http://hdl.handle.net/11104/0288145
0476382 - UFCH-W 2018 RIV GB eng J - Journal Article
Koukalová, Alena - Amaro, Mariana - Aydogan, Gokcan - Gröbner, G. - Williamson, P. T. F. - Mikhalyov, I. - Hof, Martin - Šachl, Radek
Lipid Driven Nanodomains in Giant Lipid Vesicles are Fluid and Disordered.
Scientific Reports. Roč. 7, JUL 2017 (2017), č. článku 5460. ISSN 2045-2322
R&D Projects: GA ČR GA17-03160S
Institutional Support: RVO:61388955
Keywords: FLUORESCENCE CORRELATION SPECTROSCOPY * PLASMA-MEMBRANE VESICLES * RESONANCE ENERGY-TRANSFER
Subject RIV: CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry
Impact factor: 4.122, year: 2017
Permanent link: http://hdl.handle.net/11104/0272893
0436047 - UFCH-W 2016 RIV NL eng J - Journal Article
Koukalová, Alena - Pokorná, Šárka - Fišer, Radovan - Kopecký, Jr., V. - Humpolíčková, Jana - Černý, J. - Hof, Martin
Membrane activity of the pentaene macrolide didehydroroflamycoin in 2 model lipid bilayers.
Biochimica Et Biophysica Acta-Biomembranes. Roč. 1848, č. 2 (2015), s. 444-452. ISSN 0005-2736
R&D Projects: GA ČR(CZ) GC14-03141J; GA MŠk LH13259
Institutional Support: RVO:61388955 ; RVO:61388971
Keywords: Didehydroroflamycoin * Filipin III * Amphotericin B
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 3.687, year: 2015
Permanent link: http://hdl.handle.net/11104/0239913
0487732 - UFCH-W 2019 RIV US eng J - Journal Article
Kulig, W. - Mikkolainen, H. - Olžyńska, Agnieszka - Jurkiewicz, Piotr - Cwiklik, Lukasz - Hof, Martin - Vattulainen, I. - Jungwirth, P. - Rog, T.
Bobbing of Oxysterols: Molecular Mechanism for Translocation of Tail-Oxidized Sterols through Biological Membranes.
Journal of Physical Chemistry Letters. Roč. 9, č. 5 (2018), s. 1118-1123. ISSN 1948-7185
R&D Projects: GA ČR(CZ) GBP208/12/G016; GA MŠk(CZ) EF16_019/0000729
Institutional Support: RVO:61388955
Keywords: biological membranes * alcohols * cell membranes
Subject RIV: CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry
Impact factor: 7.329, year: 2018
Permanent link: http://hdl.handle.net/11104/0282365
0435887 - UFCH-W 2016 RIV NL eng J - Journal Article
Kulig, W. - Jurkiewicz, Piotr - Olžyńska, Agnieszka - Tynkkynen, J. - Javanainen, M. - Manna, M. - Rog, T. - Hof, Martin - Vattulainen, I. - Jungwirth, Pavel
Experimental determination and computational interpretation of biophysical properties of lipid bilayers enriched by cholesteryl hemisuccinate.
Biochimica Et Biophysica Acta-Biomembranes. Roč. 1848, č. 2 (2015), s. 422-432. ISSN 0005-2736
R&D Projects: GA ČR GBP208/12/G016
Institutional Support: RVO:61388955 ; RVO:61388963
Keywords: Time-dependent fluorescence shift * Molecular dynamics simulations * Cholesterol-mimicking detergents
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 3.687, year: 2015
Permanent link: http://hdl.handle.net/11104/0239787
0443291 - UFCH-W 2016 RIV US eng J - Journal Article
Kulig, W. - Olžyńska, Agnieszka - Jurkiewicz, Piotr - Kantola, A. M. - Komulainen, S. - Manna, M. - Pourmousa, M. - Vazdar, M. - Cwiklik, Lukasz - Rog, T. - Khelashvili, G. - Harries, D. - Telkki, V. - V. - Hof, Martin - Vattulainen, I. - Jungwirth, Pavel
Cholesterol under oxidative stress — How lipid membranes sense oxidation as cholesterol is being replaced by oxysterols.
Free Radical Biology and Medicine. Roč. 84, JUL 2015 (2015), s. 30-41. ISSN 0891-5849
R&D Projects: GA ČR GBP208/12/G016
Institutional Support: RVO:61388955 ; RVO:61388963
Keywords: phospholipid bilayers * oxysterols * molecular dynamics simulations
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 5.784, year: 2015
Permanent link: http://hdl.handle.net/11104/0246022
0458389 - FZU-D 2017 RIV US eng J - Journal Article
Kůsová, Kateřina - Pelant, Ivan - Humpolíčková, Jana - Hof, Martin
Comprehensive description of blinking-dynamics regimes in singledirect-band-gap silicon nanocrystals.
Physical Review. B. Roč. 93, č. 3 (2016), 1-13, č. článku 035412. ISSN 1098-0121
R&D Projects: GA ČR(CZ) GBP108/12/G108; GA ČR GPP204/12/P235
Institutional Support: RVO:68378271 ; RVO:61388955
Keywords: silicon nanocrystals * direct bandgap * intermittency * trions
Subject RIV: BM - Solid Matter Physics & Magnetism; CF - Physical & Theoretical Chemistry
Impact factor: 3.736, year: 2014
Permanent link: http://hdl.handle.net/11104/0258652
0461678 - UEB-Q 2017 RIV US eng J - Journal Article
Laňková, Martina - Humpolíčková, Jana - Vosolsobě, S. - Cit, Zdeněk - Lacek, Jozef - Čovan, Martin - Čovanová, Milada - Hof, Martin - Petrášek, Jan
Determination of Dynamics of Plant Plasma Membrane Proteins with Fluorescence Recovery and Raster Image Correlation Spectroscopy.
Microscopy and Microanalysis. Roč. 22, č. 2 (2016), s. 290-299. ISSN 1431-9276
R&D Projects: GA ČR(CZ) GAP305/11/2476; GA ČR(CZ) GPP501/12/P951
Institutional Support: RVO:61389030 ; RVO:61388955
Keywords: raster image correlation spectroscopy * fluorescence recovery after photobleaching * auxin influx
Subject RIV: EB - Genetics & Molecular Biology; CF - Physical & Theoretical Chemistry
Impact factor: 1.891, year: 2016
Petrášek, Jan
Permanent link: http://hdl.handle.net/11104/0261271
0458493 - UFCH-W 2017 RIV NL eng J - Journal Article
Lidman, M. - Pokorná, Šárka - Dingeldein, A. P. G. - Sparrman, T. - Wallgren, M. - Šachl, Radek - Hof, Martin - Gröbner, G.
The oxidized phospholipid PazePC promotes permeabilization of mitochondrial membranes by Bax.
Biochimica Et Biophysica Acta-Biomembranes. Roč. 1858, č. 6 (2016), s. 1288-1297. ISSN 0005-2736
R&D Projects: GA ČR GBP208/12/G016
Institutional Support: RVO:61388955
Keywords: Apoptosis * Bax-protein * Calorimetry
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 3.498, year: 2016
Permanent link: http://hdl.handle.net/11104/0258761
0447841 - UFCH-W 2016 RIV NL eng J - Journal Article
Loizeau, D. - Jurkiewicz, Piotr - Aydogan, Gokcan - Philimonenko, Anatoly - Mahfoudhi, S. - Hozák, Pavel - Maroto, A. - Couthon-Courves, H. - Jaffres, P.-A. - Deschamps, L. - Giamarchi, P. - Hof, Martin
Biophysical properties of cationic lipophosphoramidates: Vesicle morphology, bilayer hydration and dynamics.
Colloids and Surfaces B-Biointerfaces. Roč. 136, DEC 2015 (2015), s. 192-200. ISSN 0927-7765
R&D Projects: GA ČR GBP208/12/G016
Institutional Support: RVO:61388955 ; RVO:68378050
Keywords: gene therapy * transfection * non-viral DNA vector
Subject RIV: CF - Physical & Theoretical Chemistry; EB - Genetics & Molecular Biology
Impact factor: 3.902, year: 2015
Permanent link: http://hdl.handle.net/11104/0249609
0482386 - FZU-D 2018 RIV GB eng J - Journal Article
Lunova, Mariia - Prokhorov, Andriy - Jirsa, M. - Hof, Martin - Olžyńska, Agnieszka - Jurkiewicz, Piotr - Kubinová, Šárka - Lunov, Oleg - Dejneka, Alexandr
Nanoparticle core stability and surface functionalization drive the mTOR signaling pathway in hepatocellular cell lines.
Scientific Reports. Roč. 7, Nov (2017), s. 1-16, č. článku 16049. ISSN 2045-2322
R&D Projects: GA MŠk LO1409; GA MŠk LM2015088
AV ČR(CZ) Fellowship J. E. Purkyně
Institutional Support: RVO:68378271 ; RVO:61388955
Keywords: nanoparticle core stability * surface functionalization drive * mTOR signaling pathway * hepatocellular cell lines
Subject RIV: BO - Biophysics; CF - Physical & Theoretical Chemistry
Obor OECD: Biophysics; Physical chemistry (UFCH-W)
Impact factor: 4.122, year: 2017
Permanent link: http://hdl.handle.net/11104/0277783
0474257 - UOCHB-X 2018 RIV US eng J - Journal Article
Magarkar, Aniket - Jurkiewicz, Piotr - Allolio, Christoph - Hof, Martin - Jungwirth, Pavel
Increased Binding of Calcium Ions at Positively Curved Phospholipid Membranes.
Journal of Physical Chemistry Letters. Roč. 8, č. 2 (2017), s. 518-523. ISSN 1948-7185
R&D Projects: GA ČR(CZ) GA16-01074S; GA ČR(CZ) GAP207/12/0919
AV ČR(CZ) AP1102
Akademická prémie - Praemium Academiae
Institutional Support: RVO:61388963 ; RVO:61388955
Keywords: molecular dynamics * fluorescence spectroscopy * calcium * phospholipids
Subject RIV: CF - Physical & Theoretical Chemistry; CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry; Physical chemistry (UFCH-W)
Impact factor: 8.709, year: 2017
Jungwirth, Pavel
Permanent link: http://hdl.handle.net/11104/0271384
0494619 - UFCH-W 2019 RIV CH eng M - Monograph chapter
Macháň, Radek - Hof, Martin
Fluorescence Correlation Spectroscopy of Lipid Membranes.
Encyclopedia of Biophysics. Geneve: Springer Nature Switzerland AG, 2018, s. 1-8. ISBN 978-3-642-35943-9
Institutional Support: RVO:61388955
Keywords: fluorescence * spectroscopy * lipid membranes
Subject RIV: CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry
https://link.springer.com/referenceworkentry/10.1007/978-3-642-35943-9_560-1
Macháň, Radek
Permanent link: http://hdl.handle.net/11104/0287730
0428676 - UFCH-W 2015 RIV US eng J - Journal Article
Macháň, Radek - Jurkiewicz, Piotr - Olžyńska, Agnieszka - Olšinová, Marie - Cebecauer, Marek - Marquette, A. - Bechinger, B. - Hof, Martin
Peripheral and Integral Membrane Binding of Peptides Characterized by Time-Dependent Fluorescence Shifts: Focus on Antimicrobial Peptide LAH4.
Langmuir. Roč. 30, č. 21 (2014), s. 6171-6179. ISSN 0743-7463
R&D Projects: GA ČR GBP208/12/G016
Institutional Support: RVO:61388955
Keywords: SOLID-STATE NMR * CORRELATION SPECTROSCOPY * LIPID-BILAYERS
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 4.457, year: 2014
Permanent link: http://hdl.handle.net/11104/0233977
0429656 - UFCH-W 2015 RIV DE eng J - Journal Article
Macháň, Radek - Kapusta, Peter - Hof, Martin
Statistical filtering in fluorescence microscopy and fluorescence correlation spectroscopy.
Analytical and Bioanalytical Chemistry. Roč. 406, č. 20 (2014), s. 4797-4813. ISSN 1618-2642
R&D Projects: GA ČR GBP208/12/G016
Institutional Support: RVO:61388955
Keywords: Filtered fluorescence correlation spectroscopy * Fluorescence lifetime correlation spectroscopy * Fluorescence spectral correlation spectroscopy
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 3.436, year: 2014
Permanent link: http://hdl.handle.net/11104/0234737
0466352 - UFCH-W 2017 RIV GB eng J - Journal Article
Melcrová, Adéla - Pokorná, Šárka - Pullanchery, S. - Kohagen, Miriam - Jurkiewicz, Piotr - Hof, Martin - Jungwirth, Pavel - Cremer, P. S. - Cwiklik, Lukasz
The complex nature of calcium cation interactions with phospholipid bilayers.
Scientific Reports. Roč. 6, DEC 2016 (2016), č. článku 38035. ISSN 2045-2322
R&D Projects: GA ČR(CZ) GBP208/12/G016; GA ČR(CZ) GA16-01074S
Institutional Support: RVO:61388955 ; RVO:61388963
Keywords: FLUORESCENCE SOLVENT RELAXATION * MOLECULAR-DYNAMICS SIMULATIONS * ALKALINE-EARTH CATIONS
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 4.259, year: 2016
Permanent link: http://hdl.handle.net/11104/0264672
0443634 - UOCHB-X 2016 RIV US eng J - Journal Article
Ménová, Petra - Dziuba, Dmytro - Güixens-Gallardo, Pedro - Jurkiewicz, Piotr - Hof, Martin - Hocek, Michal
Fluorescence Quenching in Oligonucleotides Containing 7-Substituted 7-Deazaguanine Bases Prepared by the Nicking Enzyme Amplification Reaction.
Bioconjugate Chemistry. Roč. 26, č. 2 (2015), s. 361-366. ISSN 1043-1802
R&D Projects: GA ČR GBP206/12/G151
Institutional Support: RVO:61388963 ; RVO:61388955
Keywords: ethidium bromide * electrochemical detection * DNA
Subject RIV: CC - Organic Chemistry; CF - Physical & Theoretical Chemistry
Impact factor: 4.500, year: 2015
Hocek, Michal
Permanent link: http://hdl.handle.net/11104/0246341
0427760 - UFCH-W 2015 RIV GB eng J - Journal Article
Olšinová, Marie - Jurkiewicz, Piotr - Pozník, M. - Šachl, Radek - Prausová, T. - Hof, Martin - Kozmik, V. - Teplý, Filip - Svoboda, J. - Cebecauer, Marek
Di- and tri-oxalkyl derivatives of a boron dipyrromethene (BODIPY) rotor dye in lipid bilayers.
Physical Chemistry Chemical Physics. Roč. 16, č. 22 (2014), s. 10688-10697. ISSN 1463-9076
R&D Projects: GA ČR GAP305/11/0459
Institutional Support: RVO:61388955 ; RVO:61388963
Keywords: PLASMA-MEMBRANE VESICLES * MOLECULAR ROTOR * FLUORESCENCE POLARIZATION
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 4.493, year: 2014
Permanent link: http://hdl.handle.net/11104/0233255
0497636 - UFCH-W 2019 RIV US eng J - Journal Article
Olšinová, Marie - Jurkiewicz, Piotr - Kishko, Irina - Sýkora, Jan - Sabó, Ján - Hof, Martin - Cwiklik, Lukasz - Cebecauer, Marek
Roughness of Transmembrane Helices Reduces Lipid Membrane Dynamics.
iScience. Roč. 10, DEC 2018 (2018), s. 87-97. E-ISSN 2589-0042
R&D Projects: GA ČR GAP305/11/0459; GA ČR(CZ) GBP208/12/G016; GA ČR(CZ) GA18-26751S
GA MŠk(CZ) LM2015042
Institutional Support: RVO:61388955
Keywords: LATERAL DIFFUSION * HYDROPHOBIC MISMATCH * PROTEIN INTERACTIONS
Subject RIV: CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry
Cebecauer, Marek
Permanent link: http://hdl.handle.net/11104/0290177
0434363 - UFCH-W 2016 RIV NL eng J - Journal Article
Parkkila, P. - Štefl, Martin - Olžyńska, Agnieszka - Hof, Martin - Kinnunen, P. K. J.
Phospholipid lateral diffusion in phosphatidylcholine-sphingomyelin-cholesterol monolayers; Effects of oxidatively truncated phosphatidylcholines.
Biochimica Et Biophysica Acta-Biomembranes. Roč. 1848, č. 1 (2015), s. 167-173. ISSN 0005-2736
R&D Projects: GA ČR GBP208/12/G016
Institutional Support: RVO:61388955
Keywords: Oxidatively truncated phosphatidylcholines * Lateral diffusion * Fluorescence correlation spectroscopy
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 3.687, year: 2015
Permanent link: http://hdl.handle.net/11104/0238434
0433922 - UFCH-W 2015 RIV US eng J - Journal Article
Pokorná, Šárka - Jurkiewicz, Piotr - Vazdar, M. - Cwiklik, Lukasz - Jungwirth, Pavel - Hof, Martin
Does fluoride disrupt hydrogen bond network in cationic lipid bilayer? Time-dependent fluorescence shift of Laurdan and molecular dynamics simulations.
Journal of Chemical Physics. Roč. 141, č. 22 (2014), 22D516. ISSN 0021-9606
R&D Projects: GA ČR GBP208/12/G016
Institutional Support: RVO:61388955 ; RVO:61388963
Keywords: fluorescence sfifts * Cationic lipids * Hydrogen bond networks
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 2.952, year: 2014
Permanent link: http://hdl.handle.net/11104/0238095
0431065 - UFCH-W 2015 RIV US eng J - Journal Article
Pospíšil, Petr - Luxem, K. E. - Ener, M. - Sýkora, Jan - Kocábová, Jana - Gray, H. B. - Vlček, Antonín - Hof, Martin
Fluorescence Quenching of (Dimethylamino)naphthalene Dyes Badan and Prodan by Tryptophan in Cytochromes P450 and Micelles.
Journal of Physical Chemistry B. Roč. 118, č. 34 (2014), s. 10085-10091. ISSN 1520-6106
R&D Projects: GA ČR GBP208/12/G016; GA MŠk LH13015
Institutional Support: RVO:61388955
Keywords: fluorescence * Cyclic Voltammetry * Micelles
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 3.302, year: 2014
Permanent link: http://hdl.handle.net/11104/0235706
0429552 - UFCH-W 2015 RIV HU eng J - Journal Article
Pruchnik, H. - Kral, Teresa - Hof, Martin
Interaction of new butyltin citrate complex with lipid model membrane and DNA.
Journal of Thermal Analysis and Calorimetry. Roč. 118, č. 2 (2014), s. 967-975. ISSN 1388-6150
R&D Projects: GA ČR GBP208/12/G016
GA MŠk(CZ) CZ.1.07/2.3.00/20.0092
Institutional Support: RVO:61388955
Keywords: Butyltin citrate complex * Phase transition * DSC
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 2.042, year: 2014
Permanent link: http://hdl.handle.net/11104/0234671
0476865 - UFCH-W 2018 RIV US eng J - Journal Article
Pruchnik, H. - Kral, Teresa - Hof, Martin
Interaction of Newly Platinum(II) with Tris(2-carboxyethyl)phosphine Complex with DNA and Model Lipid Membrane.
Journal of Membrane Biology. Roč. 250, č. 5 (2017), s. 461-470. ISSN 0022-2631
R&D Projects: GA ČR(CZ) GBP208/12/G016
Institutional Support: RVO:61388955
Keywords: dna * DPPC bilayer * dsc * IR spectroscopy * Platinum(II) complex * tcspc-fcs
Subject RIV: CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry
Impact factor: 1.638, year: 2017
Permanent link: http://hdl.handle.net/11104/0273283
0492525 - UFCH-W 2019 RIV HU eng J - Journal Article
Pruchnik, H. - Kral, Teresa - Hof, Martin
Lipid and DNA interaction with the triorganotin dimethylaminophenylazobenzoates studied by DSC and spectroscopy methods.
Journal of Thermal Analysis and Calorimetry. Roč. 134, č. 1 (2018), s. 691-700. ISSN 1388-6150
Institutional Support: RVO:61388955
Keywords: triorganotin complexes * phase transition * DSC
Subject RIV: CF - Physical & Theoretical Chemistry
Obor OECD: Physical chemistry
Impact factor: 2.471, year: 2018
Permanent link: http://hdl.handle.net/11104/0286024
0451455 - UFCH-W 2017 RIV IE eng J - Journal Article
Pruchnik, H. - Kral, Teresa - Poradowski, D. - Drynda, A. - Obmińska-Mrukowicz, B. - Hof, Martin
New cytotoxic butyltin complexes with 2-sulfobenzoic acid: Molecular interaction with lipid bilayers and DNA as well as in vitro anticancer activity.
Chemico-Biological Interactions. Roč. 243, JAN 2016 (2016), s. 107-118. ISSN 0009-2797
R&D Projects: GA ČR GBP208/12/G016
Institutional Support: RVO:61388955
Keywords: Butyltin 2-sulfobenzoates * Antitumor activity * Lipid bilayer
Subject RIV: CF - Physical & Theoretical Chemistry
Impact factor: 3.143, year: 2016
Permanent link: http://hdl.handle.net/11104/0252631
