Hana Šimková's picture

Ing. Hana Šimková, CSc.

Email: simkovah@ueb.cas.cz
Tel.: +420 585 238 715
Fax: +420 585 205 853

Address:
Šlechtitelů 31, 783 71, Olomouc - Holice, Česká republika
Room number: 206

Profile

Hana Šimková EN

Position: 
senior scientist
Workgroup: 
Centre of Plant Structural and Functional Genomics
Publications: 
Number of publications: 118

2015

  • Sequencing of 15 622 gene-bearing BACs clarifies the gene-dense regions of the barley genome
    Muñoz-Amatriaín, M., Lonardi, S., Luo, M.-C., Madishetty, K., Svensson, J.T., Moscou, M.J., Wanamaker, S., Jiang, T., Kleinhofs, A., Muehlbauer, G.J., Wise, R.P., Stein, N., Ma, Y., Rodriguez, E., Kudrna, D., Bhat, P.R., Chao, S., Condamine, P., Heinen, S., Resnik, J., Wing, R., Witt, H.N., Alpert, M., Beccuti, M., Bozdag, S., Cordero, F., Mirebrahim, H., Ounit, R., Wu, Y., You, F., Zheng, J., Šimková, H., Doležel, J., Grimwood, J., Schmutz, J., Duma, D., Altschmied, L., Blake, T., Bregitzer, P., Cooper, L., Dilbirligi, M., Falk, A., Feiz, L., Graner, A., Gustafson, P., Hayes, P.M., Lemaux, P., Mammadov, J., Close, T.J.
    PLANT JOURNAL 84 216-227 2015 Fulltext: PDF link on intranet only
  • The wheat Sr50 gene reveals rich diversity at a cereal disease resistance locus
    Mago, R., Zhang, P., Vautrin, S., Šimková, H., Bansal, U., Luo, M.-C., Rouse, M., Karaoglu, H., Periyannan, S., Kolmer, J., Jin, Y., Ayliffe, M.A., Bariana, H., Park, R.F., McIntosh, R., Doležel, J., Bergès, H., Spielmeyer, W., Lagudah, E.S., Ellis, J.G., Dodds, P.N.
    NATURE PLANTS 1 15186 2015 Fulltext: PDF link on intranet only
  • Physical mapping of bread wheat chromosome 5A: An integrated approach
    Barabaschi, D., Magni, F., Volante, A., Gadaleta, A., Šimková, H., Scalabrin, S., Prazzoli, M.L., Bagnaresi, P., Lacrima, K., Michelotti, V., Desiderio, F., Orru, L., Mazzamurro, V., Fricano, A., Mastrangelo, A.M., Tononi, P., Vitulo, N., Jurman, I., Frenkel, Z., Cattonaro, F., Morgante, M., Blanco, A., Doležel, J., Delledonne, M., Stanca, A.M., Cattivelli, L., Vale, G.
    THE PLANT GENOME 8 1-24 2015 Fulltext: PDF link on intranet only
  • Holocentromeres in Rhynchospora are associated with genome-wide centromere-specific repeat arrays interspersed among euchromatin
    Marques, A., Ribeiro, T., Neumann, P., Macas, J., Novák, P., Schubert, V., Pellino, M., Fuchs, J., Ma, W., Kuhlmann, M., Brandt, R., Vanzela, A.L.L., Beseda, T., Šimková, H., Pedrosa-Harand, A., Houben, A.
    PNAS 112 13633-13638 2015 Fulltext: PDF link on intranet only

2014

  • Advances in plant chromosome genomics
    Doležel, J., Vrána, J., Cápal, P., Kubaláková, M., Burešová, V., Šimková, H.
    BIOTECHNOLOGY ADVANCES 32 122-136 2014 Fulltext: PDF link on intranet only
  • The Wheat Black Jack: Advances towards sequencing the 21 chromosomes of bread wheat
    Choulet, F., Caccamo, M., Wright, J., Alaux, M., Šimková, H., Šafář, J., Leroy, P., Doležel, J., Rogers, J., Eversole, K., Feuillet, C.
    Genomics of plant genetic resources 405-438 2014 Fulltext: PDF link on intranet only
  • Computational identification and comparative analysis of miRNAs in wheat group 7 chromosomes
    Deng, P., Nie, X., Wang, L., Cui, L., Liu, P., Tong, W., Biradar, S.S., Edwards, D., Berkman, P., Šimková, H., Doležel, J., Luo, M., You, F., Batley, J., Fleury, D., Appels, R., Weining, S.
    PLANT MOLECULAR BIOLOGY REPORTER 32 487-500 2014 Fulltext: PDF link on intranet only
  • Flow cytometric chromosome sorting from diploid progenitors of bread wheat, T. urartu, Ae. speltoides and Ae. tauschii
    Molnár, I., Kubaláková, M., Šimková, H., Farkas, A., Cseh, A., Megyeri, M., Vrána, J., Molnár-Láng, M., Doležel, J.
    THEORETICAL AND APPLIED GENETICS 127 1091-1104 2014 Fulltext: PDF link on intranet only
  • A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome
    Mayer, K.F.X., Rogers, J., Doležel, J., Pozniak, C., Eversole, K., Feuillet, C., Gill, B., Friebe, B., Lukaszewski, A.J., Sourdille, P., Endo, T.R., Kubaláková, M., Číhalíková, J., Dubská, Z., Vrána, J., Šperková, R., Šimková, H., Febrer, M., Clissold, L., McLay, K., Singh, K., Chhuneja, P., Singh, N.K., Khurana, J., Akhunov, E., Choulet, F., Alberti, A., Barbe, V., Wincker, P., Kanamori, H., Kobayashi, F., Itoh, T., Matsumoto, T., Sakai, H., Tanaka, T., Wu, J.Z., Ogihara, Y., Handa, H., Maclachlan, P.R., Sharpe, A., Klassen, D., Edwards, D., Batley, J., Olsen, O.A., Sandve, S.R., Lien, S., Steuernagel, B., Wulff, B., Caccamo, M., Ayling, S., Ramirez-Gonzalez, R.H., Clavijo, B.J., Wright, J., Pfeifer, M., Spannagl, M., Martis, M.M., Mascher, M., Chapman, J., Poland, J.A., Scholz, U., Barry, K., Waugh, R., Rokhsar, D.S., Muehlbauer, G.J., Stein, N., Gundlach, H., Zytnicki, M., Jamilloux, V., Quesneville, H., Wicker, T., Faccioli, P., Colaiacovo, M., Stanca, A.M., Budak, H., Cattivelli, L., Glover, N., Pingault, L., Paux, E., Sharma, S., Appels, R., Bellgard, M., Chapman, B., Nussbaumer, T., Bader, K.C., Rimbert, H., Wang, S.C., Knox, R., Kilian, A., Alaux, M., Alfama, F., Couderc, L., Guilhot, N., Viseux, C., Loaec, M., Keller, B., Praud, S.
    SCIENCE 345 1-11 2014 Fulltext: PDF link on intranet only
  • A chromosomal genomics approach to assess and validate the desi and kabuli draft chickpea genome assemblies
    Ruperao, P., Chan, C.K., Azam, S., Karafiátová, M., Hayashi, S., Cížková, J., Saxena, R.K., Šimková, H., Song, C., Vrána, J., Chitikineni, A., Visendi, P., Gaur, P.M., Millán, T., Singh, K.B., Taran, B., Wang, J., Batley, J., Doležel, J., Varshney, R.K., Edwards, D.
    PLANT BIOTECHNOLOGY JOURNAL 12 778-786 2014 Fulltext: PDF link on intranet only